RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 ZNF541Q9H0D2 1346 aa11.12□□□□□ -0.63
UBFD1-202ENST00000563366 ASNSP08243 561 aa11.12□□□□□ -0.63
UBFD1-202ENST00000563366 EEF2P13639 858 aaKnown RBP11.12□□□□□ -0.63
UBFD1-202ENST00000563366 LMOD1P29536 600 aaPredicted RBP11.12□□□□□ -0.63
UBFD1-202ENST00000563366 GNA11P29992 359 aa11.12□□□□□ -0.63
UBFD1-202ENST00000563366 TRAPPC10P48553 1259 aa11.12□□□□□ -0.63
UBFD1-202ENST00000563366 ATP2B2Q01814 1243 aa11.12□□□□□ -0.63
UBFD1-202ENST00000563366 MAP3K10Q02779 954 aa11.12□□□□□ -0.63
UBFD1-202ENST00000563366 TRAF1Q13077 416 aa11.12□□□□□ -0.63
UBFD1-202ENST00000563366 CCDC96Q2M329 555 aa11.12□□□□□ -0.63
UBFD1-202ENST00000563366 CCDC183Q5T5S1 534 aa11.12□□□□□ -0.63
UBFD1-202ENST00000563366 ANO1Q5XXA6 986 aa11.12□□□□□ -0.63
UBFD1-202ENST00000563366 PPP1R18Q6NYC8 613 aa11.12□□□□□ -0.63
UBFD1-202ENST00000563366 THSD4Q6ZMP0 1018 aa11.12□□□□□ -0.63
UBFD1-202ENST00000563366 DAGLBQ8NCG7 672 aa11.12□□□□□ -0.63
UBFD1-202ENST00000563366 BICD2Q8TD16 824 aa11.12□□□□□ -0.63
UBFD1-202ENST00000563366 SYMPKQ92797 1274 aaKnown RBP11.12□□□□□ -0.63
UBFD1-202ENST00000563366 KCTD12Q96CX2 325 aaKnown RBP11.12□□□□□ -0.63
UBFD1-202ENST00000563366 GMCL1Q96IK5 515 aa11.12□□□□□ -0.63
UBFD1-202ENST00000563366 CHAMP1Q96JM3 812 aa11.12□□□□□ -0.63
UBFD1-202ENST00000563366 TMEM39BQ9GZU3 492 aa11.12□□□□□ -0.63
UBFD1-202ENST00000563366 GZF1Q9H116 711 aaPredicted RBP11.12□□□□□ -0.63
UBFD1-202ENST00000563366 RIOX1Q9H6W3 641 aa11.12□□□□□ -0.63
UBFD1-202ENST00000563366 DDX19AQ9NUU7 478 aaKnown RBP11.12□□□□□ -0.63
UBFD1-202ENST00000563366 WBP1LQ9NX94 342 aa11.12□□□□□ -0.63
UBFD1-202ENST00000563366 BARHL2Q9NY43 387 aa11.12□□□□□ -0.63
UBFD1-202ENST00000563366 VPS54Q9P1Q0 977 aa11.12□□□□□ -0.63
UBFD1-202ENST00000563366 MORC2Q9Y6X9 1032 aaPredicted RBP11.12□□□□□ -0.63
UBFD1-202ENST00000563366 GOLGB1Q14789 3259 aaKnown RBP11.12□□□□□ -0.63
UBFD1-202ENST00000563366 PITPNM2Q9BZ72 1349 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 ESYT2A0FGR8 921 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 POTEMA6NI47 508 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 FAM196BA6NMK8 535 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 USP17L5A8MUK1 530 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 BTBD18B2RXH4 712 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 KIF28PB7ZC32 967 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 CFAP99D6REC4 459 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 SPTLC2O15270 562 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 PPP6R2O75170 966 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 GADD45BO75293 160 aaPredicted RBP11.11□□□□□ -0.63
UBFD1-202ENST00000563366 GDF11O95390 407 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 GH2P01242 217 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 SLC1A4P43007 532 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 ME1P48163 572 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 PRELPP51888 382 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 ZNF445P59923 1031 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 RASA3Q14644 834 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 SEPT2Q15019 361 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 L1TD1Q5T7N2 865 aaKnown RBP11.11□□□□□ -0.63
UBFD1-202ENST00000563366 USP17L2Q6R6M4 530 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 CCDC73Q6ZRK6 1079 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 RETREG3Q86VR2 466 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 TEX2Q8IWB9 1127 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 LINC00301Q8NCQ3 95 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 POM121Q96HA1 1249 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 GLT8D2Q9H1C3 349 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 GJB4Q9NTQ9 266 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 HACL1Q9UJ83 578 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 ZBTB21Q9ULJ3 1066 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 KCNJ14Q9UNX9 436 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 MTMR7Q9Y216 660 aa11.11□□□□□ -0.63
UBFD1-202ENST00000563366 BAZ2BQ9UIF8 2168 aaKnown RBP11.1□□□□□ -0.63
UBFD1-202ENST00000563366 SCN4AP35499 1836 aa11.1□□□□□ -0.63
UBFD1-202ENST00000563366 PNMA6FA0A0J9YX94 578 aa11.1□□□□□ -0.63
UBFD1-202ENST00000563366 A0A1W2PQ27 194 aa11.1□□□□□ -0.63
UBFD1-202ENST00000563366 A0A1W2PQ64 194 aa11.1□□□□□ -0.63
UBFD1-202ENST00000563366 A0A1W2PQD8 194 aa11.1□□□□□ -0.63
UBFD1-202ENST00000563366 GOLGA6L3A6NEY3 463 aa11.1□□□□□ -0.63
UBFD1-202ENST00000563366 SOCS7O14512 581 aa11.1□□□□□ -0.63
UBFD1-202ENST00000563366 CYTH3O43739 400 aa11.1□□□□□ -0.63
UBFD1-202ENST00000563366 GOLGA8HP0CJ92 632 aa11.1□□□□□ -0.63
UBFD1-202ENST00000563366 CAP2P40123 477 aa11.1□□□□□ -0.63
UBFD1-202ENST00000563366 NAPAP54920 295 aa11.1□□□□□ -0.63
UBFD1-202ENST00000563366 CEBPZQ03701 1054 aaKnown RBP11.1□□□□□ -0.63
UBFD1-202ENST00000563366 SLC39A14Q15043 492 aa11.1□□□□□ -0.63
UBFD1-202ENST00000563366 ZSCAN23Q3MJ62 389 aa11.1□□□□□ -0.63
UBFD1-202ENST00000563366 TBC1D10BQ4KMP7 808 aaPredicted RBP11.1□□□□□ -0.63
UBFD1-202ENST00000563366 SLFN13Q68D06 897 aa11.1□□□□□ -0.63
UBFD1-202ENST00000563366 ADALQ6DHV7 355 aa11.1□□□□□ -0.63
UBFD1-202ENST00000563366 HEATR3Q7Z4Q2 680 aa11.1□□□□□ -0.63
UBFD1-202ENST00000563366 BLIDQ8IZY5 108 aa11.1□□□□□ -0.63
UBFD1-202ENST00000563366 C6orf50Q9HD87 102 aa11.1□□□□□ -0.63
UBFD1-202ENST00000563366 PRM3Q9NNZ6 103 aa11.1□□□□□ -0.63
UBFD1-202ENST00000563366 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.1□□□□□ -0.63
UBFD1-202ENST00000563366 RNF181Q9P0P0 153 aa11.1□□□□□ -0.63
UBFD1-202ENST00000563366 PCDHA4Q9UN74 947 aa11.1□□□□□ -0.63
UBFD1-202ENST00000563366 hCG_1642624A0A1W2PR95 340 aa11.09□□□□□ -0.63
UBFD1-202ENST00000563366 F5H6K3 240 aa11.09□□□□□ -0.63
UBFD1-202ENST00000563366 UBE2Q2LH0YL09 131 aa11.09□□□□□ -0.63
UBFD1-202ENST00000563366 STXBP3O00186 592 aa11.09□□□□□ -0.63
UBFD1-202ENST00000563366 NR1I2O75469 434 aa11.09□□□□□ -0.63
UBFD1-202ENST00000563366 KLRC3Q07444 240 aa11.09□□□□□ -0.63
UBFD1-202ENST00000563366 MCTP2Q6DN12 878 aa11.09□□□□□ -0.63
UBFD1-202ENST00000563366 HOMER1Q86YM7 354 aa11.09□□□□□ -0.63
UBFD1-202ENST00000563366 PRR7Q8TB68 274 aa11.09□□□□□ -0.63
UBFD1-202ENST00000563366 ZMYND12Q9H0C1 365 aa11.09□□□□□ -0.63
UBFD1-202ENST00000563366 DEFB129Q9H1M3 183 aa11.09□□□□□ -0.63
UBFD1-202ENST00000563366 ADARB2Q9NS39 739 aaKnown RBP11.09□□□□□ -0.63
UBFD1-202ENST00000563366 TMEM63CQ9P1W3 806 aa11.09□□□□□ -0.63
UBFD1-202ENST00000563366 PGAP2Q9UHJ9 254 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms