RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 STRNO43815 780 aa12.09□□□□□ -0.47
SNX29-202ENST00000563308 ACTN1P12814 892 aa12.09□□□□□ -0.47
SNX29-202ENST00000563308 EEF2P13639 858 aaKnown RBP12.09□□□□□ -0.47
SNX29-202ENST00000563308 RASA1P20936 1047 aa12.09□□□□□ -0.47
SNX29-202ENST00000563308 DSG3P32926 999 aa12.09□□□□□ -0.47
SNX29-202ENST00000563308 IRS1P35568 1242 aa12.09□□□□□ -0.47
SNX29-202ENST00000563308 MCTP2Q6DN12 878 aa12.09□□□□□ -0.47
SNX29-202ENST00000563308 TRIM67Q6ZTA4 783 aa12.09□□□□□ -0.47
SNX29-202ENST00000563308 GPATCH3Q96I76 525 aa12.09□□□□□ -0.47
SNX29-202ENST00000563308 TANGO6Q9C0B7 1094 aa12.09□□□□□ -0.47
SNX29-202ENST00000563308 HIPK3Q9H422 1215 aa12.09□□□□□ -0.47
SNX29-202ENST00000563308 ARHGEF10LQ9HCE6 1279 aa12.09□□□□□ -0.47
SNX29-202ENST00000563308 ARPP21Q9UBL0 812 aaPredicted RBP12.09□□□□□ -0.47
SNX29-202ENST00000563308 ADAMTS5Q9UNA0 930 aa12.09□□□□□ -0.47
SNX29-202ENST00000563308 FAM186AA6NE01 2351 aa12.09□□□□□ -0.47
SNX29-202ENST00000563308 ELP1O95163 1332 aa12.09□□□□□ -0.47
SNX29-202ENST00000563308 TTC41PQ6P2S7 1318 aa12.09□□□□□ -0.47
SNX29-202ENST00000563308 ROBO3Q96MS0 1386 aa12.08□□□□□ -0.48
SNX29-202ENST00000563308 BRWD1Q9NSI6 2320 aa12.08□□□□□ -0.48
SNX29-202ENST00000563308 RIF1Q5UIP0 2472 aaKnown RBP12.08□□□□□ -0.48
SNX29-202ENST00000563308 WDR46O15213 610 aaKnown RBP12.08□□□□□ -0.48
SNX29-202ENST00000563308 GPAA1O43292 621 aa12.08□□□□□ -0.48
SNX29-202ENST00000563308 ADORA2AP29274 412 aa12.08□□□□□ -0.48
SNX29-202ENST00000563308 TAP1Q03518 808 aa12.08□□□□□ -0.48
SNX29-202ENST00000563308 PUM1Q14671 1186 aaKnown RBP eCLIP12.08□□□□□ -0.48
SNX29-202ENST00000563308 SHCBP1Q8NEM2 672 aa12.08□□□□□ -0.48
SNX29-202ENST00000563308 ATG4CQ96DT6 458 aa12.08□□□□□ -0.48
SNX29-202ENST00000563308 DDRGK1Q96HY6 314 aa12.08□□□□□ -0.48
SNX29-202ENST00000563308 CRBNQ96SW2 442 aa12.08□□□□□ -0.48
SNX29-202ENST00000563308 SLC9A7Q96T83 725 aa12.08□□□□□ -0.48
SNX29-202ENST00000563308 SEC62Q99442 399 aaKnown RBP12.08□□□□□ -0.48
SNX29-202ENST00000563308 SPATC1LQ9H0A9 340 aa12.08□□□□□ -0.48
SNX29-202ENST00000563308 KANSL2Q9H9L4 492 aa12.08□□□□□ -0.48
SNX29-202ENST00000563308 FBXO28Q9NVF7 368 aa12.08□□□□□ -0.48
SNX29-202ENST00000563308 TPRP12270 2363 aaKnown RBP12.07□□□□□ -0.48
SNX29-202ENST00000563308 IGKV6D-41A0A0C4DH26 115 aa12.07□□□□□ -0.48
SNX29-202ENST00000563308 A0A0U1RQG5 324 aaPredicted RBP12.07□□□□□ -0.48
SNX29-202ENST00000563308 FLOT1O75955 427 aa12.07□□□□□ -0.48
SNX29-202ENST00000563308 ZFYP08048 801 aaPredicted RBP12.07□□□□□ -0.48
SNX29-202ENST00000563308 ERCC3P19447 782 aa12.07□□□□□ -0.48
SNX29-202ENST00000563308 NUBP1P53384 320 aa12.07□□□□□ -0.48
SNX29-202ENST00000563308 TMEM132BQ14DG7 1078 aa12.07□□□□□ -0.48
SNX29-202ENST00000563308 AMOTL1Q8IY63 956 aa12.07□□□□□ -0.48
SNX29-202ENST00000563308 MB21D1Q8N884 522 aa12.07□□□□□ -0.48
SNX29-202ENST00000563308 SH2D4AQ9H788 454 aa12.07□□□□□ -0.48
SNX29-202ENST00000563308 NRBP1Q9UHY1 535 aa12.07□□□□□ -0.48
SNX29-202ENST00000563308 GREB1LQ9C091 1923 aaPredicted RBP12.07□□□□□ -0.48
SNX29-202ENST00000563308 CHD7Q9P2D1 2997 aa12.06□□□□□ -0.48
SNX29-202ENST00000563308 C19orf67A6NJJ6 358 aa12.06□□□□□ -0.48
SNX29-202ENST00000563308 MINDY4BA8MYZ0 360 aa12.06□□□□□ -0.48
SNX29-202ENST00000563308 H3BQ06 376 aaPredicted RBP12.06□□□□□ -0.48
SNX29-202ENST00000563308 ARVCFO00192 962 aa12.06□□□□□ -0.48
SNX29-202ENST00000563308 FOXP2O15409 715 aa12.06□□□□□ -0.48
SNX29-202ENST00000563308 COBLO75128 1261 aa12.06□□□□□ -0.48
SNX29-202ENST00000563308 PFKMP08237 780 aa12.06□□□□□ -0.48
SNX29-202ENST00000563308 AKR1A1P14550 325 aa12.06□□□□□ -0.48
SNX29-202ENST00000563308 CCL23P55773 120 aa12.06□□□□□ -0.48
SNX29-202ENST00000563308 KCNA10Q16322 511 aa12.06□□□□□ -0.48
SNX29-202ENST00000563308 ZMYM1Q5SVZ6 1142 aa12.06□□□□□ -0.48
SNX29-202ENST00000563308 RNF135Q8IUD6 432 aa12.06□□□□□ -0.48
SNX29-202ENST00000563308 PCSK9Q8NBP7 692 aaKnown RBP12.06□□□□□ -0.48
SNX29-202ENST00000563308 REPS2Q8NFH8 660 aa12.06□□□□□ -0.48
SNX29-202ENST00000563308 GDPD5Q8WTR4 605 aa12.06□□□□□ -0.48
SNX29-202ENST00000563308 CHAMP1Q96JM3 812 aa12.06□□□□□ -0.48
SNX29-202ENST00000563308 SPC25Q9HBM1 224 aa12.06□□□□□ -0.48
SNX29-202ENST00000563308 COL4A6Q14031 1691 aa12.06□□□□□ -0.48
SNX29-202ENST00000563308 PATL2C9JE40 543 aaKnown RBP12.05□□□□□ -0.48
SNX29-202ENST00000563308 GNAT2P19087 354 aa12.05□□□□□ -0.48
SNX29-202ENST00000563308 MX1P20591 662 aa12.05□□□□□ -0.48
SNX29-202ENST00000563308 AVPR2P30518 371 aa12.05□□□□□ -0.48
SNX29-202ENST00000563308 IFNL3Q8IZI9 196 aa12.05□□□□□ -0.48
SNX29-202ENST00000563308 STK11IPQ8N1F8 1099 aa12.05□□□□□ -0.48
SNX29-202ENST00000563308 PHOSPHO2Q8TCD6 241 aa12.05□□□□□ -0.48
SNX29-202ENST00000563308 RMDN1Q96DB5 314 aa12.05□□□□□ -0.48
SNX29-202ENST00000563308 MROH8Q9H579 483 aa12.05□□□□□ -0.48
SNX29-202ENST00000563308 NYAP2Q9P242 653 aa12.05□□□□□ -0.48
SNX29-202ENST00000563308 PPP1R9AQ9ULJ8 1098 aa12.05□□□□□ -0.48
SNX29-202ENST00000563308 PARP14Q460N5 1801 aa12.04□□□□□ -0.48
SNX29-202ENST00000563308 ZNF236Q9UL36 1845 aa12.04□□□□□ -0.48
SNX29-202ENST00000563308 TRANK1O15050 2925 aa12.04□□□□□ -0.48
SNX29-202ENST00000563308 PLXNA3P51805 1871 aa12.04□□□□□ -0.48
SNX29-202ENST00000563308 MYH8P13535 1937 aa12.04□□□□□ -0.48
SNX29-202ENST00000563308 VWA5AO00534 786 aa12.04□□□□□ -0.48
SNX29-202ENST00000563308 LPXNO60711 386 aa12.04□□□□□ -0.48
SNX29-202ENST00000563308 PRDM1O75626 825 aa12.04□□□□□ -0.48
SNX29-202ENST00000563308 NBL1P41271 181 aa12.04□□□□□ -0.48
SNX29-202ENST00000563308 CDK7P50613 346 aa12.04□□□□□ -0.48
SNX29-202ENST00000563308 HDAC1Q13547 482 aaPredicted RBP12.04□□□□□ -0.48
SNX29-202ENST00000563308 FAM83BQ5T0W9 1011 aa12.04□□□□□ -0.48
SNX29-202ENST00000563308 ABRAQ8N0Z2 381 aa12.04□□□□□ -0.48
SNX29-202ENST00000563308 NUP88Q99567 741 aaPredicted RBP12.04□□□□□ -0.48
SNX29-202ENST00000563308 MKNK2Q9HBH9 465 aa12.04□□□□□ -0.48
SNX29-202ENST00000563308 CTNNA3Q9UI47 895 aa12.04□□□□□ -0.48
SNX29-202ENST00000563308 ZNF214Q9UL59 606 aaPredicted RBP12.04□□□□□ -0.48
SNX29-202ENST00000563308 CACNA1HO95180 2353 aa12.03□□□□□ -0.48
SNX29-202ENST00000563308 F5H6K3 240 aa12.03□□□□□ -0.48
SNX29-202ENST00000563308 NDUFB10O96000 172 aa12.03□□□□□ -0.48
SNX29-202ENST00000563308 APPP05067 770 aa12.03□□□□□ -0.48
SNX29-202ENST00000563308 TDO2P48775 406 aa12.03□□□□□ -0.48
SNX29-202ENST00000563308 KLRC3Q07444 240 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms