RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 PURBQ96QR8 312 aaKnown RBP9.96□□□□□ -0.82
UBR1-204ENST00000563239 RNF208Q9H0X6 261 aa9.96□□□□□ -0.82
UBR1-204ENST00000563239 RNF39Q9H2S5 420 aa9.96□□□□□ -0.82
UBR1-204ENST00000563239 ACAD9Q9H845 621 aa9.96□□□□□ -0.82
UBR1-204ENST00000563239 ZSWIM6Q9HCJ5 1215 aa9.96□□□□□ -0.82
UBR1-204ENST00000563239 VAT1LQ9HCJ6 419 aa9.96□□□□□ -0.82
UBR1-204ENST00000563239 FBXO40Q9UH90 709 aa9.96□□□□□ -0.82
UBR1-204ENST00000563239 DIS3Q9Y2L1 958 aaKnown RBP9.96□□□□□ -0.82
UBR1-204ENST00000563239 ASTN1O14525 1302 aa9.96□□□□□ -0.82
UBR1-204ENST00000563239 RPTORQ8N122 1335 aa9.96□□□□□ -0.82
UBR1-204ENST00000563239 SOWAHBA6NEL2 793 aa9.95□□□□□ -0.82
UBR1-204ENST00000563239 CCDC69A6NI79 296 aa9.95□□□□□ -0.82
UBR1-204ENST00000563239 PLEKHA8P1O95397 391 aa9.95□□□□□ -0.82
UBR1-204ENST00000563239 GJB1P08034 283 aa9.95□□□□□ -0.82
UBR1-204ENST00000563239 CYBAP13498 195 aa9.95□□□□□ -0.82
UBR1-204ENST00000563239 GJA8P48165 433 aa9.95□□□□□ -0.82
UBR1-204ENST00000563239 PRAMEF19Q5SWL8 479 aa9.95□□□□□ -0.82
UBR1-204ENST00000563239 APOA5Q6Q788 366 aa9.95□□□□□ -0.82
UBR1-204ENST00000563239 BLOC1S2Q6QNY1 142 aa9.95□□□□□ -0.82
UBR1-204ENST00000563239 NFXL1Q6ZNB6 911 aa9.95□□□□□ -0.82
UBR1-204ENST00000563239 Q6ZUG5 572 aa9.95□□□□□ -0.82
UBR1-204ENST00000563239 ANKRD35Q8N283 1001 aa9.95□□□□□ -0.82
UBR1-204ENST00000563239 SRBD1Q8N5C6 995 aaKnown RBP9.95□□□□□ -0.82
UBR1-204ENST00000563239 NUP133Q8WUM0 1156 aa9.95□□□□□ -0.82
UBR1-204ENST00000563239 IL17RAQ96F46 866 aa9.95□□□□□ -0.82
UBR1-204ENST00000563239 TMEM106CQ9BVX2 250 aa9.95□□□□□ -0.82
UBR1-204ENST00000563239 AGXT2Q9BYV1 514 aa9.95□□□□□ -0.82
UBR1-204ENST00000563239 CRISPLD2Q9H0B8 497 aa9.95□□□□□ -0.82
UBR1-204ENST00000563239 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.95□□□□□ -0.82
UBR1-204ENST00000563239 FAM217BQ9NTX9 383 aaPredicted RBP9.95□□□□□ -0.82
UBR1-204ENST00000563239 CYP39A1Q9NYL5 469 aa9.95□□□□□ -0.82
UBR1-204ENST00000563239 KIAA0100Q14667 2235 aaKnown RBP9.94□□□□□ -0.82
UBR1-204ENST00000563239 LCTP09848 1927 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 OPLAHO14841 1288 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 ZBTB5O15062 677 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 SGPL1O95470 568 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 SNAI1O95863 264 aaPredicted RBP9.94□□□□□ -0.82
UBR1-204ENST00000563239 CASTP20810 708 aaKnown RBP9.94□□□□□ -0.82
UBR1-204ENST00000563239 FUT2Q10981 343 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 BAATQ14032 418 aaPredicted RBP9.94□□□□□ -0.82
UBR1-204ENST00000563239 USH1GQ495M9 461 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 MFSD14CQ5VZR4 134 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 LHX8Q68G74 356 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 MAMDC4Q6UXC1 1216 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 RUFY3Q7L099 469 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 UBE2Q1Q7Z7E8 422 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 ZNF467Q7Z7K2 595 aaPredicted RBP9.94□□□□□ -0.82
UBR1-204ENST00000563239 FBXO11Q86XK2 927 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 CCDC144CPQ8IYA2 1237 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 CMTR1Q8N1G2 835 aaKnown RBP9.94□□□□□ -0.82
UBR1-204ENST00000563239 FANCBQ8NB91 859 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 U2AF1L4Q8WU68 220 aaKnown RBP9.94□□□□□ -0.82
UBR1-204ENST00000563239 TBC1D5Q92609 795 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 DDX11Q96FC9 970 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 DEFB118Q96PH6 123 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 PIGSQ96S52 555 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 TINF2Q9BSI4 451 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 SPZ1Q9BXG8 430 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 TM6SF1Q9BZW5 370 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 HMX1Q9NP08 348 aaPredicted RBP9.94□□□□□ -0.82
UBR1-204ENST00000563239 SLC5A4Q9NY91 659 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 SLC12A7Q9Y666 1083 aa9.94□□□□□ -0.82
UBR1-204ENST00000563239 DDX49Q9Y6V7 483 aaKnown RBP9.94□□□□□ -0.82
UBR1-204ENST00000563239 PLXNA1Q9UIW2 1896 aa9.93□□□□□ -0.82
UBR1-204ENST00000563239 PFASO15067 1338 aa9.93□□□□□ -0.82
UBR1-204ENST00000563239 ABCB11O95342 1321 aa9.93□□□□□ -0.82
UBR1-204ENST00000563239 KLF18A0A0U1RQI7 1052 aa9.93□□□□□ -0.82
UBR1-204ENST00000563239 POTEB2H3BUK9 544 aa9.93□□□□□ -0.82
UBR1-204ENST00000563239 DLL1O00548 723 aa9.93□□□□□ -0.82
UBR1-204ENST00000563239 DHX16O60231 1041 aaKnown RBP9.93□□□□□ -0.82
UBR1-204ENST00000563239 ZNF865P0CJ78 1059 aaPredicted RBP9.93□□□□□ -0.82
UBR1-204ENST00000563239 CALM1P0DP23 149 aa9.93□□□□□ -0.82
UBR1-204ENST00000563239 CALM2P0DP24 149 aa9.93□□□□□ -0.82
UBR1-204ENST00000563239 CALM3P0DP25 149 aa9.93□□□□□ -0.82
UBR1-204ENST00000563239 PSMA5P28066 241 aa9.93□□□□□ -0.82
UBR1-204ENST00000563239 SMARCA1P28370 1054 aa9.93□□□□□ -0.82
UBR1-204ENST00000563239 MNX1P50219 401 aaPredicted RBP9.93□□□□□ -0.82
UBR1-204ENST00000563239 EVCP57679 992 aa9.93□□□□□ -0.82
UBR1-204ENST00000563239 APOBRQ0VD83 1088 aa9.93□□□□□ -0.82
UBR1-204ENST00000563239 TOB2Q14106 344 aaPredicted RBP9.93□□□□□ -0.82
UBR1-204ENST00000563239 NSMFQ6X4W1 530 aa9.93□□□□□ -0.82
UBR1-204ENST00000563239 SLC30A10Q6XR72 485 aa9.93□□□□□ -0.82
UBR1-204ENST00000563239 TMTC3Q6ZXV5 915 aa9.93□□□□□ -0.82
UBR1-204ENST00000563239 MICU3Q86XE3 530 aa9.93□□□□□ -0.82
UBR1-204ENST00000563239 RGS22Q8NE09 1264 aa9.93□□□□□ -0.82
UBR1-204ENST00000563239 CTCFLQ8NI51 663 aaPredicted RBP9.93□□□□□ -0.82
UBR1-204ENST00000563239 BRF1Q92994 677 aa9.93□□□□□ -0.82
UBR1-204ENST00000563239 KATNBL1Q9H079 304 aa9.93□□□□□ -0.82
UBR1-204ENST00000563239 PNMA2Q9UL42 364 aa9.93□□□□□ -0.82
UBR1-204ENST00000563239 GTF3C3Q9Y5Q9 886 aa9.93□□□□□ -0.82
UBR1-204ENST00000563239 NID2Q14112 1375 aa9.92□□□□□ -0.82
UBR1-204ENST00000563239 SYNGAP1Q96PV0 1343 aa9.92□□□□□ -0.82
UBR1-204ENST00000563239 PNMA6FA0A0J9YX94 578 aa9.92□□□□□ -0.82
UBR1-204ENST00000563239 CDC27P30260 824 aa9.92□□□□□ -0.82
UBR1-204ENST00000563239 KIF5BP33176 963 aa9.92□□□□□ -0.82
UBR1-204ENST00000563239 ANAPC15P60006 121 aa9.92□□□□□ -0.82
UBR1-204ENST00000563239 RPS6P62753 249 aaKnown RBP9.92□□□□□ -0.82
UBR1-204ENST00000563239 GHRHRQ02643 423 aa9.92□□□□□ -0.82
UBR1-204ENST00000563239 RNF207Q6ZRF8 634 aa9.92□□□□□ -0.82
UBR1-204ENST00000563239 HOMER1Q86YM7 354 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms