RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 GOLGA8HP0CJ92 632 aa19.72■□□□□ 0.75
CLK3-210ENST00000563112 DNAH12Q6ZR08 3092 aa19.72■□□□□ 0.75
CLK3-210ENST00000563112 ENAHQ8N8S7 591 aaPredicted RBP19.72■□□□□ 0.75
CLK3-210ENST00000563112 LENG1Q96BZ8 264 aaPredicted RBP19.72■□□□□ 0.75
CLK3-210ENST00000563112 WDR19Q8NEZ3 1342 aa19.72■□□□□ 0.75
CLK3-210ENST00000563112 SYNRGQ9UMZ2 1314 aa19.72■□□□□ 0.75
CLK3-210ENST00000563112 PTPDC1A2A3K4 754 aa19.71■□□□□ 0.75
CLK3-210ENST00000563112 BAATQ14032 418 aaPredicted RBP19.71■□□□□ 0.75
CLK3-210ENST00000563112 ASPRV1Q53RT3 343 aa19.71■□□□□ 0.75
CLK3-210ENST00000563112 IFIT1BQ5T764 474 aaKnown RBP19.71■□□□□ 0.75
CLK3-210ENST00000563112 C1orf53Q5VUE5 145 aa19.71■□□□□ 0.75
CLK3-210ENST00000563112 UBA5Q9GZZ9 404 aa19.71■□□□□ 0.75
CLK3-210ENST00000563112 A0A1W2PQ45 241 aaPredicted RBP19.7■□□□□ 0.74
CLK3-210ENST00000563112 A0A1W2PQY0 241 aa19.7■□□□□ 0.74
CLK3-210ENST00000563112 MOXD2PA6NHM9 499 aa19.7■□□□□ 0.74
CLK3-210ENST00000563112 SGSM2O43147 1006 aa19.7■□□□□ 0.74
CLK3-210ENST00000563112 PARP1P09874 1014 aaKnown RBP19.7■□□□□ 0.74
CLK3-210ENST00000563112 C6orf222P0C671 652 aaPredicted RBP19.7■□□□□ 0.74
CLK3-210ENST00000563112 ACLYP53396 1101 aa19.7■□□□□ 0.74
CLK3-210ENST00000563112 MDM2Q00987 491 aaPredicted RBP19.7■□□□□ 0.74
CLK3-210ENST00000563112 PTH1RQ03431 593 aa19.7■□□□□ 0.74
CLK3-210ENST00000563112 SNX17Q15036 470 aa19.7■□□□□ 0.74
CLK3-210ENST00000563112 TRIM60Q495X7 471 aa19.7■□□□□ 0.74
CLK3-210ENST00000563112 NOL8Q76FK4 1167 aaKnown RBP19.7■□□□□ 0.74
CLK3-210ENST00000563112 PCSK9Q8NBP7 692 aaKnown RBP19.7■□□□□ 0.74
CLK3-210ENST00000563112 NUP133Q8WUM0 1156 aa19.7■□□□□ 0.74
CLK3-210ENST00000563112 NFIBO00712 420 aa19.69■□□□□ 0.74
CLK3-210ENST00000563112 DHX16O60231 1041 aaKnown RBP19.69■□□□□ 0.74
CLK3-210ENST00000563112 GJA9P57773 515 aa19.69■□□□□ 0.74
CLK3-210ENST00000563112 TNFAIP2Q03169 654 aa19.69■□□□□ 0.74
CLK3-210ENST00000563112 KCNA10Q16322 511 aa19.69■□□□□ 0.74
CLK3-210ENST00000563112 RNF207Q6ZRF8 634 aa19.69■□□□□ 0.74
CLK3-210ENST00000563112 KIAA1211Q6ZU35 1233 aa19.69■□□□□ 0.74
CLK3-210ENST00000563112 RALYLQ86SE5 291 aaKnown RBP19.69■□□□□ 0.74
CLK3-210ENST00000563112 KLHDC9Q8NEP7 349 aa19.69■□□□□ 0.74
CLK3-210ENST00000563112 MPHOSPH6Q99547 160 aaKnown RBP19.69■□□□□ 0.74
CLK3-210ENST00000563112 KATNBL1Q9H079 304 aa19.69■□□□□ 0.74
CLK3-210ENST00000563112 PRDM5Q9NQX1 630 aaPredicted RBP19.69■□□□□ 0.74
CLK3-210ENST00000563112 PCDH10Q9P2E7 1040 aa19.69■□□□□ 0.74
CLK3-210ENST00000563112 LOC102724159A0A0B4J2E5 919 aa19.68■□□□□ 0.74
CLK3-210ENST00000563112 ERICH2A1L162 156 aa19.68■□□□□ 0.74
CLK3-210ENST00000563112 CYP21A2P08686 494 aa19.68■□□□□ 0.74
CLK3-210ENST00000563112 CALML3P27482 149 aa19.68■□□□□ 0.74
CLK3-210ENST00000563112 CST5P28325 142 aaPredicted RBP19.68■□□□□ 0.74
CLK3-210ENST00000563112 TLE2Q04725 743 aa19.68■□□□□ 0.74
CLK3-210ENST00000563112 PWP2Q15269 919 aaKnown RBP19.68■□□□□ 0.74
CLK3-210ENST00000563112 GNASQ5JWF2 1037 aa19.68■□□□□ 0.74
CLK3-210ENST00000563112 TDHQ8IZJ6 230 aa19.68■□□□□ 0.74
CLK3-210ENST00000563112 GLT1D1Q96MS3 346 aa19.68■□□□□ 0.74
CLK3-210ENST00000563112 UPF3AQ9H1J1 476 aaKnown RBP19.68■□□□□ 0.74
CLK3-210ENST00000563112 VTA1Q9NP79 307 aa19.68■□□□□ 0.74
CLK3-210ENST00000563112 STARD7Q9NQZ5 370 aa19.68■□□□□ 0.74
CLK3-210ENST00000563112 B4DLN1 442 aa19.67■□□□□ 0.74
CLK3-210ENST00000563112 MRPL12P52815 198 aaKnown RBP19.67■□□□□ 0.74
CLK3-210ENST00000563112 CDC37Q16543 378 aaPredicted RBP19.67■□□□□ 0.74
CLK3-210ENST00000563112 USH1GQ495M9 461 aa19.67■□□□□ 0.74
CLK3-210ENST00000563112 IQSEC1Q6DN90 963 aa19.67■□□□□ 0.74
CLK3-210ENST00000563112 CYB5R4Q7L1T6 521 aa19.67■□□□□ 0.74
CLK3-210ENST00000563112 CENPQQ7L2Z9 268 aaPredicted RBP19.67■□□□□ 0.74
CLK3-210ENST00000563112 EEPD1Q7L9B9 569 aa19.67■□□□□ 0.74
CLK3-210ENST00000563112 ADGRF4Q8IZF3 695 aa19.67■□□□□ 0.74
CLK3-210ENST00000563112 NCOA7Q8NI08 942 aa19.67■□□□□ 0.74
CLK3-210ENST00000563112 CLEC4DQ8WXI8 215 aa19.67■□□□□ 0.74
CLK3-210ENST00000563112 VTI1AQ96AJ9 217 aa19.67■□□□□ 0.74
CLK3-210ENST00000563112 CPVLQ9H3G5 476 aa19.67■□□□□ 0.74
CLK3-210ENST00000563112 ADCY6O43306 1168 aa19.66■□□□□ 0.74
CLK3-210ENST00000563112 ALDH5A1P51649 535 aaPredicted RBP19.66■□□□□ 0.74
CLK3-210ENST00000563112 SART3Q15020 963 aaKnown RBP19.66■□□□□ 0.74
CLK3-210ENST00000563112 CCSAPQ6IQ19 270 aaPredicted RBP19.66■□□□□ 0.74
CLK3-210ENST00000563112 MORC4Q8TE76 937 aa19.66■□□□□ 0.74
CLK3-210ENST00000563112 MAP4K1Q92918 833 aa19.66■□□□□ 0.74
CLK3-210ENST00000563112 PURBQ96QR8 312 aaKnown RBP19.66■□□□□ 0.74
CLK3-210ENST00000563112 MAF1Q9H063 256 aa19.66■□□□□ 0.74
CLK3-210ENST00000563112 AP5M1Q9H0R1 490 aa19.66■□□□□ 0.74
CLK3-210ENST00000563112 VAT1LQ9HCJ6 419 aa19.66■□□□□ 0.74
CLK3-210ENST00000563112 ASTN1O14525 1302 aa19.66■□□□□ 0.74
CLK3-210ENST00000563112 ABCB11O95342 1321 aa19.66■□□□□ 0.74
CLK3-210ENST00000563112 MYADML2A6NDP7 307 aa19.65■□□□□ 0.74
CLK3-210ENST00000563112 E7EWF7 191 aa19.65■□□□□ 0.74
CLK3-210ENST00000563112 IFIT3O14879 490 aaKnown RBP19.65■□□□□ 0.74
CLK3-210ENST00000563112 ASGR1P07306 291 aa19.65■□□□□ 0.74
CLK3-210ENST00000563112 RPS6P62753 249 aaKnown RBP19.65■□□□□ 0.74
CLK3-210ENST00000563112 SEC23AQ15436 765 aa19.65■□□□□ 0.74
CLK3-210ENST00000563112 SLC30A10Q6XR72 485 aa19.65■□□□□ 0.74
CLK3-210ENST00000563112 FBXO16Q8IX29 292 aaPredicted RBP19.65■□□□□ 0.74
CLK3-210ENST00000563112 RGS22Q8NE09 1264 aa19.65■□□□□ 0.74
CLK3-210ENST00000563112 PDLIM7Q9NR12 457 aa19.65■□□□□ 0.74
CLK3-210ENST00000563112 ELP1O95163 1332 aa19.65■□□□□ 0.74
CLK3-210ENST00000563112 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.64■□□□□ 0.73
CLK3-210ENST00000563112 DCDC2CA8MYV0 355 aa19.64■□□□□ 0.73
CLK3-210ENST00000563112 ZEB2O60315 1214 aa19.64■□□□□ 0.73
CLK3-210ENST00000563112 PQBP1O60828 265 aaKnown RBP19.64■□□□□ 0.73
CLK3-210ENST00000563112 CLTBP09497 229 aa19.64■□□□□ 0.73
CLK3-210ENST00000563112 NKX3-2P78367 333 aa19.64■□□□□ 0.73
CLK3-210ENST00000563112 TAPT1Q6NXT6 567 aa19.64■□□□□ 0.73
CLK3-210ENST00000563112 TLK2Q86UE8 772 aa19.64■□□□□ 0.73
CLK3-210ENST00000563112 FBXO11Q86XK2 927 aa19.64■□□□□ 0.73
CLK3-210ENST00000563112 MCF2L2Q86YR7 1114 aa19.64■□□□□ 0.73
CLK3-210ENST00000563112 DNERQ8NFT8 737 aa19.64■□□□□ 0.73
CLK3-210ENST00000563112 TOX2Q96NM4 488 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms