RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 MRPL11Q9Y3B7 192 aaKnown RBP21.74■■□□□ 1.07
RAB40C-207ENST00000563109 PCDHA1Q9Y5I3 950 aa21.74■■□□□ 1.07
RAB40C-207ENST00000563109 STK36Q9NRP7 1315 aa21.74■■□□□ 1.07
RAB40C-207ENST00000563109 hCG_1984214I3L0E3 225 aa21.73■■□□□ 1.07
RAB40C-207ENST00000563109 PSMC4P43686 418 aa21.73■■□□□ 1.07
RAB40C-207ENST00000563109 GPR142Q7Z601 462 aa21.73■■□□□ 1.07
RAB40C-207ENST00000563109 PLEKHH3Q7Z736 793 aa21.73■■□□□ 1.07
RAB40C-207ENST00000563109 ZNF713Q8N859 430 aaPredicted RBP21.73■■□□□ 1.07
RAB40C-207ENST00000563109 COA7Q96BR5 231 aa21.73■■□□□ 1.07
RAB40C-207ENST00000563109 LLPHQ9BRT6 129 aaKnown RBP21.73■■□□□ 1.07
RAB40C-207ENST00000563109 RIPK3Q9Y572 518 aa21.73■■□□□ 1.07
RAB40C-207ENST00000563109 ZNF236Q9UL36 1845 aa21.73■■□□□ 1.07
RAB40C-207ENST00000563109 PTPDC1A2A3K4 754 aa21.72■■□□□ 1.07
RAB40C-207ENST00000563109 K7ELQ4 463 aaPredicted RBP21.72■■□□□ 1.07
RAB40C-207ENST00000563109 PPP1R11O60927 126 aaPredicted RBP21.72■■□□□ 1.07
RAB40C-207ENST00000563109 DEXIO95424 95 aa21.72■■□□□ 1.07
RAB40C-207ENST00000563109 SCG2P13521 617 aa21.72■■□□□ 1.07
RAB40C-207ENST00000563109 TAL1P17542 331 aaPredicted RBP21.72■■□□□ 1.07
RAB40C-207ENST00000563109 ST3GAL1Q11201 340 aa21.72■■□□□ 1.07
RAB40C-207ENST00000563109 PFKFB3Q16875 520 aaPredicted RBP21.72■■□□□ 1.07
RAB40C-207ENST00000563109 MMP19Q99542 508 aa21.72■■□□□ 1.07
RAB40C-207ENST00000563109 PPFIA3O75145 1194 aa21.71■■□□□ 1.07
RAB40C-207ENST00000563109 FCER1AP12319 257 aa21.71■■□□□ 1.07
RAB40C-207ENST00000563109 LBX1P52954 281 aa21.71■■□□□ 1.07
RAB40C-207ENST00000563109 KCTD2Q14681 263 aa21.71■■□□□ 1.07
RAB40C-207ENST00000563109 NSUN7Q8NE18 718 aaKnown RBP21.71■■□□□ 1.07
RAB40C-207ENST00000563109 WASF1Q92558 559 aa21.71■■□□□ 1.07
RAB40C-207ENST00000563109 ARHGAP39Q9C0H5 1083 aa21.71■■□□□ 1.07
RAB40C-207ENST00000563109 ORC3Q9UBD5 711 aaPredicted RBP21.71■■□□□ 1.07
RAB40C-207ENST00000563109 STRNO43815 780 aa21.7■■□□□ 1.06
RAB40C-207ENST00000563109 CTDNEP1O95476 244 aa21.7■■□□□ 1.06
RAB40C-207ENST00000563109 GNRH1P01148 92 aa21.7■■□□□ 1.06
RAB40C-207ENST00000563109 HOXD10P28358 340 aa21.7■■□□□ 1.06
RAB40C-207ENST00000563109 WWC2Q6AWC2 1192 aa21.7■■□□□ 1.06
RAB40C-207ENST00000563109 PPP1R18Q6NYC8 613 aa21.7■■□□□ 1.06
RAB40C-207ENST00000563109 MCF2L2Q86YR7 1114 aa21.7■■□□□ 1.06
RAB40C-207ENST00000563109 ANKRD35Q8N283 1001 aa21.7■■□□□ 1.06
RAB40C-207ENST00000563109 CCDC12Q8WUD4 166 aaPredicted RBP21.7■■□□□ 1.06
RAB40C-207ENST00000563109 SOCS4Q8WXH5 440 aa21.7■■□□□ 1.06
RAB40C-207ENST00000563109 GPKOWQ92917 476 aaPredicted RBP eCLIP21.7■■□□□ 1.06
RAB40C-207ENST00000563109 TRIM47Q96LD4 638 aa21.7■■□□□ 1.06
RAB40C-207ENST00000563109 SMCHD1A6NHR9 2005 aa21.7■■□□□ 1.06
RAB40C-207ENST00000563109 CASP8AP2Q9UKL3 1982 aa21.69■■□□□ 1.06
RAB40C-207ENST00000563109 SLC15A5A6NIM6 579 aa21.69■■□□□ 1.06
RAB40C-207ENST00000563109 NAPAP54920 295 aa21.69■■□□□ 1.06
RAB40C-207ENST00000563109 HMGN5P82970 282 aaKnown RBP21.69■■□□□ 1.06
RAB40C-207ENST00000563109 MUM1L1Q5H9M0 696 aa21.69■■□□□ 1.06
RAB40C-207ENST00000563109 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.69■■□□□ 1.067e-7■■■□□ 16.7
RAB40C-207ENST00000563109 ABRAQ8N0Z2 381 aa21.69■■□□□ 1.06
RAB40C-207ENST00000563109 BARHL2Q9NY43 387 aa21.69■■□□□ 1.06
RAB40C-207ENST00000563109 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.69■■□□□ 1.06
RAB40C-207ENST00000563109 PFASO15067 1338 aa21.69■■□□□ 1.06
RAB40C-207ENST00000563109 NFIBO00712 420 aa21.68■■□□□ 1.06
RAB40C-207ENST00000563109 JAK2O60674 1132 aa21.68■■□□□ 1.06
RAB40C-207ENST00000563109 XBP1P17861 261 aa21.68■■□□□ 1.06
RAB40C-207ENST00000563109 PTPREP23469 700 aa21.68■■□□□ 1.06
RAB40C-207ENST00000563109 CTGFP29279 349 aa21.68■■□□□ 1.06
RAB40C-207ENST00000563109 GRB14Q14449 540 aa21.68■■□□□ 1.06
RAB40C-207ENST00000563109 PKN1Q16512 942 aa21.68■■□□□ 1.06
RAB40C-207ENST00000563109 NSMFQ6X4W1 530 aa21.68■■□□□ 1.06
RAB40C-207ENST00000563109 CCDC148Q8NFR7 591 aa21.68■■□□□ 1.06
RAB40C-207ENST00000563109 CLEC4DQ8WXI8 215 aa21.68■■□□□ 1.06
RAB40C-207ENST00000563109 DDX11Q96FC9 970 aa21.68■■□□□ 1.06
RAB40C-207ENST00000563109 NUDT12Q9BQG2 462 aa21.68■■□□□ 1.06
RAB40C-207ENST00000563109 MAF1Q9H063 256 aa21.68■■□□□ 1.06
RAB40C-207ENST00000563109 STXBP3O00186 592 aa21.67■■□□□ 1.06
RAB40C-207ENST00000563109 SLC5A4Q9NY91 659 aa21.67■■□□□ 1.06
RAB40C-207ENST00000563109 KIF3AQ9Y496 699 aa21.67■■□□□ 1.06
RAB40C-207ENST00000563109 ZNFX1Q9P2E3 1918 aaKnown RBP21.67■■□□□ 1.06
RAB40C-207ENST00000563109 PLXNA1Q9UIW2 1896 aa21.66■■□□□ 1.06
RAB40C-207ENST00000563109 ADORA2AP29274 412 aa21.66■■□□□ 1.06
RAB40C-207ENST00000563109 RGS2P41220 211 aa21.66■■□□□ 1.06
RAB40C-207ENST00000563109 BECN1Q14457 450 aa21.66■■□□□ 1.06
RAB40C-207ENST00000563109 RNF207Q6ZRF8 634 aa21.66■■□□□ 1.06
RAB40C-207ENST00000563109 FAM184AQ8NB25 1140 aa21.66■■□□□ 1.06
RAB40C-207ENST00000563109 SMARCC2Q8TAQ2 1214 aa21.66■■□□□ 1.06
RAB40C-207ENST00000563109 CUL5Q93034 780 aa21.66■■□□□ 1.06
RAB40C-207ENST00000563109 A1CFQ9NQ94 594 aaKnown RBP21.66■■□□□ 1.06
RAB40C-207ENST00000563109 SH3GLB2Q9NR46 395 aa21.66■■□□□ 1.06
RAB40C-207ENST00000563109 TRIM17Q9Y577 477 aa21.66■■□□□ 1.06
RAB40C-207ENST00000563109 CFBP00751 764 aa21.65■■□□□ 1.06
RAB40C-207ENST00000563109 PRMT2P55345 433 aa21.65■■□□□ 1.06
RAB40C-207ENST00000563109 MAP2K5Q13163 448 aa21.65■■□□□ 1.06
RAB40C-207ENST00000563109 CUL4AQ13619 759 aa21.65■■□□□ 1.06
RAB40C-207ENST00000563109 MORN1Q5T089 497 aa21.65■■□□□ 1.06
RAB40C-207ENST00000563109 DPP9Q86TI2 863 aa21.65■■□□□ 1.06
RAB40C-207ENST00000563109 FAM177A1Q8N128 213 aaPredicted RBP21.65■■□□□ 1.06
RAB40C-207ENST00000563109 SAMD3Q8N6K7 520 aa21.65■■□□□ 1.06
RAB40C-207ENST00000563109 RGS22Q8NE09 1264 aa21.65■■□□□ 1.06
RAB40C-207ENST00000563109 ALG1Q9BT22 464 aa21.65■■□□□ 1.06
RAB40C-207ENST00000563109 GLT8D2Q9H1C3 349 aa21.65■■□□□ 1.06
RAB40C-207ENST00000563109 CYP39A1Q9NYL5 469 aa21.65■■□□□ 1.06
RAB40C-207ENST00000563109 VPS54Q9P1Q0 977 aa21.65■■□□□ 1.06
RAB40C-207ENST00000563109 SRRDQ9UH36 339 aa21.65■■□□□ 1.06
RAB40C-207ENST00000563109 SMC3Q9UQE7 1217 aa21.65■■□□□ 1.06
RAB40C-207ENST00000563109 DOCK3Q8IZD9 2030 aa21.64■■□□□ 1.05
RAB40C-207ENST00000563109 POTEB2H3BUK9 544 aa21.64■■□□□ 1.05
RAB40C-207ENST00000563109 GCOM1H8Y6P7 765 aaPredicted RBP21.64■■□□□ 1.05
RAB40C-207ENST00000563109 DTNBO60941 627 aa21.64■■□□□ 1.05
RAB40C-207ENST00000563109 HSP90AA1P07900 732 aaKnown RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms