RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 TMTC3Q6ZXV5 915 aa20.27■□□□□ 0.84
CCNDBP1-204ENST00000563065 ANKRD35Q8N283 1001 aa20.27■□□□□ 0.84
CCNDBP1-204ENST00000563065 CLEC4DQ8WXI8 215 aa20.27■□□□□ 0.84
CCNDBP1-204ENST00000563065 APBA2Q99767 749 aa20.27■□□□□ 0.84
CCNDBP1-204ENST00000563065 XRCC5P13010 732 aaKnown RBP20.26■□□□□ 0.83
CCNDBP1-204ENST00000563065 PDIA3P30101 505 aaKnown RBP20.26■□□□□ 0.83
CCNDBP1-204ENST00000563065 ADD1P35611 737 aaKnown RBP20.26■□□□□ 0.83
CCNDBP1-204ENST00000563065 FBXO11Q86XK2 927 aa20.26■□□□□ 0.83
CCNDBP1-204ENST00000563065 SLAIN1Q8ND83 568 aa20.26■□□□□ 0.83
CCNDBP1-204ENST00000563065 PXYLP1Q8TE99 480 aa20.26■□□□□ 0.83
CCNDBP1-204ENST00000563065 DDX11Q96FC9 970 aa20.26■□□□□ 0.83
CCNDBP1-204ENST00000563065 PURBQ96QR8 312 aaKnown RBP20.26■□□□□ 0.83
CCNDBP1-204ENST00000563065 BACH2Q9BYV9 841 aa20.26■□□□□ 0.83
CCNDBP1-204ENST00000563065 A1CFQ9NQ94 594 aaKnown RBP20.26■□□□□ 0.83
CCNDBP1-204ENST00000563065 FBXO40Q9UH90 709 aa20.26■□□□□ 0.83
CCNDBP1-204ENST00000563065 HOXC6P09630 235 aa20.25■□□□□ 0.83
CCNDBP1-204ENST00000563065 GNAQP50148 359 aa20.25■□□□□ 0.83
CCNDBP1-204ENST00000563065 METAP2P50579 478 aaKnown RBP eCLIP20.25■□□□□ 0.83
CCNDBP1-204ENST00000563065 NEK4P51957 841 aa20.25■□□□□ 0.83
CCNDBP1-204ENST00000563065 EVCP57679 992 aa20.25■□□□□ 0.83
CCNDBP1-204ENST00000563065 CCT2P78371 535 aaKnown RBP20.25■□□□□ 0.83
CCNDBP1-204ENST00000563065 CNTN2Q02246 1040 aa20.25■□□□□ 0.83
CCNDBP1-204ENST00000563065 MTFR1Q15390 333 aa20.25■□□□□ 0.83
CCNDBP1-204ENST00000563065 ZNF792Q3KQV3 632 aa20.25■□□□□ 0.83
CCNDBP1-204ENST00000563065 NSMFQ6X4W1 530 aa20.25■□□□□ 0.83
CCNDBP1-204ENST00000563065 TBC1D5Q92609 795 aa20.25■□□□□ 0.83
CCNDBP1-204ENST00000563065 ARMC5Q96C12 935 aa20.25■□□□□ 0.83
CCNDBP1-204ENST00000563065 SPZ1Q9BXG8 430 aa20.25■□□□□ 0.83
CCNDBP1-204ENST00000563065 PNMA6FA0A0J9YX94 578 aa20.24■□□□□ 0.83
CCNDBP1-204ENST00000563065 PPFIA3O75145 1194 aa20.24■□□□□ 0.83
CCNDBP1-204ENST00000563065 INHAP05111 366 aa20.24■□□□□ 0.83
CCNDBP1-204ENST00000563065 RBM25P49756 843 aaKnown RBP20.24■□□□□ 0.83
CCNDBP1-204ENST00000563065 AK2P54819 239 aa20.24■□□□□ 0.83
CCNDBP1-204ENST00000563065 NOL8Q76FK4 1167 aaKnown RBP20.24■□□□□ 0.83
CCNDBP1-204ENST00000563065 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.24■□□□□ 0.83
CCNDBP1-204ENST00000563065 ZNF333Q96JL9 665 aa20.24■□□□□ 0.83
CCNDBP1-204ENST00000563065 LZTS2Q9BRK4 669 aa20.24■□□□□ 0.83
CCNDBP1-204ENST00000563065 NCOA5Q9HCD5 579 aaKnown RBP20.24■□□□□ 0.83
CCNDBP1-204ENST00000563065 DNAJC25-GNG10A0A024R161 153 aa20.24■□□□□ 0.83
CCNDBP1-204ENST00000563065 CCDC85CA6NKD9 419 aa20.24■□□□□ 0.83
CCNDBP1-204ENST00000563065 FUT2Q10981 343 aa20.24■□□□□ 0.83
CCNDBP1-204ENST00000563065 STK3Q13188 491 aa20.24■□□□□ 0.83
CCNDBP1-204ENST00000563065 MAML3Q96JK9 1138 aa20.24■□□□□ 0.83
CCNDBP1-204ENST00000563065 AMNQ9BXJ7 453 aa20.24■□□□□ 0.83
CCNDBP1-204ENST00000563065 RBM28Q9NW13 759 aaKnown RBP20.24■□□□□ 0.83
CCNDBP1-204ENST00000563065 CYP39A1Q9NYL5 469 aa20.24■□□□□ 0.83
CCNDBP1-204ENST00000563065 TPCN1Q9ULQ1 816 aa20.24■□□□□ 0.83
CCNDBP1-204ENST00000563065 PCDHA1Q9Y5I3 950 aa20.24■□□□□ 0.83
CCNDBP1-204ENST00000563065 MYH6P13533 1939 aa20.23■□□□□ 0.83
CCNDBP1-204ENST00000563065 SMARCA1P28370 1054 aa20.23■□□□□ 0.83
CCNDBP1-204ENST00000563065 CYP2C19P33261 490 aa20.23■□□□□ 0.83
CCNDBP1-204ENST00000563065 BAATQ14032 418 aaPredicted RBP20.23■□□□□ 0.83
CCNDBP1-204ENST00000563065 RRP36Q96EU6 259 aaKnown RBP20.23■□□□□ 0.83
CCNDBP1-204ENST00000563065 FGD4Q96M96 766 aa20.23■□□□□ 0.83
CCNDBP1-204ENST00000563065 ALDH8A1Q9H2A2 487 aaPredicted RBP20.23■□□□□ 0.83
CCNDBP1-204ENST00000563065 DDX49Q9Y6V7 483 aaKnown RBP20.23■□□□□ 0.83
CCNDBP1-204ENST00000563065 ABCB11O95342 1321 aa20.22■□□□□ 0.83
CCNDBP1-204ENST00000563065 ZNF236Q9UL36 1845 aa20.22■□□□□ 0.83
CCNDBP1-204ENST00000563065 PTPDC1A2A3K4 754 aa20.22■□□□□ 0.83
CCNDBP1-204ENST00000563065 HMGCRP04035 888 aa20.22■□□□□ 0.83
CCNDBP1-204ENST00000563065 RCAN1P53805 252 aa20.22■□□□□ 0.83
CCNDBP1-204ENST00000563065 SLC30A10Q6XR72 485 aa20.22■□□□□ 0.83
CCNDBP1-204ENST00000563065 CNTNAP5Q8WYK1 1306 aa20.21■□□□□ 0.83
CCNDBP1-204ENST00000563065 POTEB2H3BUK9 544 aa20.21■□□□□ 0.83
CCNDBP1-204ENST00000563065 OPLAHO14841 1288 aa20.21■□□□□ 0.83
CCNDBP1-204ENST00000563065 DTNBO60941 627 aa20.21■□□□□ 0.83
CCNDBP1-204ENST00000563065 IGHA2P01877 340 aa20.21■□□□□ 0.83
CCNDBP1-204ENST00000563065 CALML3P27482 149 aa20.21■□□□□ 0.83
CCNDBP1-204ENST00000563065 CACNB2Q08289 660 aaPredicted RBP20.21■□□□□ 0.83
CCNDBP1-204ENST00000563065 ZNF274Q96GC6 653 aaPredicted RBP20.21■□□□□ 0.83
CCNDBP1-204ENST00000563065 UNC93B1Q9H1C4 597 aa20.21■□□□□ 0.83
CCNDBP1-204ENST00000563065 UPF2Q9HAU5 1272 aaKnown RBP20.21■□□□□ 0.83
CCNDBP1-204ENST00000563065 SLC5A4Q9NY91 659 aa20.21■□□□□ 0.83
CCNDBP1-204ENST00000563065 PNMA2Q9UL42 364 aa20.21■□□□□ 0.83
CCNDBP1-204ENST00000563065 V9GY48 417 aaPredicted RBP20.21■□□□□ 0.83
CCNDBP1-204ENST00000563065 ASTN1O14525 1302 aa20.2■□□□□ 0.82
CCNDBP1-204ENST00000563065 SOWAHBA6NEL2 793 aa20.2■□□□□ 0.82
CCNDBP1-204ENST00000563065 PRKAR2AP13861 404 aaKnown RBP20.2■□□□□ 0.82
CCNDBP1-204ENST00000563065 PRAMEF19Q5SWL8 479 aa20.2■□□□□ 0.82
CCNDBP1-204ENST00000563065 RNF207Q6ZRF8 634 aa20.2■□□□□ 0.82
CCNDBP1-204ENST00000563065 FAM133AQ8N9E0 248 aa20.2■□□□□ 0.82
CCNDBP1-204ENST00000563065 TBC1D32Q96NH3 1257 aa20.2■□□□□ 0.82
CCNDBP1-204ENST00000563065 MRPL11Q9Y3B7 192 aaKnown RBP20.2■□□□□ 0.82
CCNDBP1-204ENST00000563065 PFASO15067 1338 aa20.2■□□□□ 0.82
CCNDBP1-204ENST00000563065 CAPN15O75808 1086 aa20.19■□□□□ 0.82
CCNDBP1-204ENST00000563065 LARGE1O95461 756 aa20.19■□□□□ 0.82
CCNDBP1-204ENST00000563065 CCL5P13501 91 aa20.19■□□□□ 0.82
CCNDBP1-204ENST00000563065 RPS6P62753 249 aaKnown RBP20.19■□□□□ 0.82
CCNDBP1-204ENST00000563065 UBXN2AP68543 259 aa20.19■□□□□ 0.82
CCNDBP1-204ENST00000563065 NTRK3Q16288 839 aa20.19■□□□□ 0.82
CCNDBP1-204ENST00000563065 OLFML2BQ68BL8 750 aa20.19■□□□□ 0.82
CCNDBP1-204ENST00000563065 TRMT44Q8IYL2 757 aaKnown RBP20.19■□□□□ 0.82
CCNDBP1-204ENST00000563065 PHKBQ93100 1093 aa20.19■□□□□ 0.82
CCNDBP1-204ENST00000563065 SEC63Q9UGP8 760 aaKnown RBP20.19■□□□□ 0.82
CCNDBP1-204ENST00000563065 DIS3Q9Y2L1 958 aaKnown RBP20.19■□□□□ 0.82
CCNDBP1-204ENST00000563065 NID2Q14112 1375 aa20.19■□□□□ 0.82
CCNDBP1-204ENST00000563065 PLXNA1Q9UIW2 1896 aa20.19■□□□□ 0.82
CCNDBP1-204ENST00000563065 CCDC196A0A1B0GTZ2 297 aa20.18■□□□□ 0.82
CCNDBP1-204ENST00000563065 PPP2R5BQ15173 497 aa20.18■□□□□ 0.82
CCNDBP1-204ENST00000563065 MAP3K21Q5TCX8 1036 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms