RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 NCAPHQ15003 741 aa10.67□□□□□ -0.7
LINC00838-201ENST00000562956 SARM1Q6SZW1 724 aa10.67□□□□□ -0.7
LINC00838-201ENST00000562956 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.67□□□□□ -0.7
LINC00838-201ENST00000562956 SPATA20Q8TB22 786 aa10.67□□□□□ -0.7
LINC00838-201ENST00000562956 SMARCE1Q969G3 411 aa10.67□□□□□ -0.7
LINC00838-201ENST00000562956 ZNF830Q96NB3 372 aaPredicted RBP10.67□□□□□ -0.7
LINC00838-201ENST00000562956 LTBP3Q9NS15 1303 aa10.67□□□□□ -0.7
LINC00838-201ENST00000562956 ZKSCAN5Q9Y2L8 839 aa10.67□□□□□ -0.7
LINC00838-201ENST00000562956 LAD1O00515 517 aa10.67□□□□□ -0.7
LINC00838-201ENST00000562956 NEMFO60524 1076 aa10.67□□□□□ -0.7
LINC00838-201ENST00000562956 BMP3P12645 472 aa10.67□□□□□ -0.7
LINC00838-201ENST00000562956 GMPSP49915 693 aaPredicted RBP10.67□□□□□ -0.7
LINC00838-201ENST00000562956 CUL5Q93034 780 aa10.67□□□□□ -0.7
LINC00838-201ENST00000562956 PSTPIP2Q9H939 334 aa10.67□□□□□ -0.7
LINC00838-201ENST00000562956 PCDHA1Q9Y5I3 950 aa10.67□□□□□ -0.7
LINC00838-201ENST00000562956 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.67□□□□□ -0.7
LINC00838-201ENST00000562956 ASTN2O75129 1339 aaPredicted RBP10.66□□□□□ -0.7
LINC00838-201ENST00000562956 FZD9O00144 591 aa10.66□□□□□ -0.7
LINC00838-201ENST00000562956 OR52Z1P0C646 297 aa10.66□□□□□ -0.7
LINC00838-201ENST00000562956 RPS12P25398 132 aaKnown RBP10.66□□□□□ -0.7
LINC00838-201ENST00000562956 PRPHP41219 470 aa10.66□□□□□ -0.7
LINC00838-201ENST00000562956 TNNI2P48788 182 aa10.66□□□□□ -0.7
LINC00838-201ENST00000562956 IKQ13123 557 aaPredicted RBP10.66□□□□□ -0.7
LINC00838-201ENST00000562956 MORC3Q14149 939 aa10.66□□□□□ -0.7
LINC00838-201ENST00000562956 RASA3Q14644 834 aa10.66□□□□□ -0.7
LINC00838-201ENST00000562956 PDXDC2PQ6P474 469 aa10.66□□□□□ -0.7
LINC00838-201ENST00000562956 SAMD7Q7Z3H4 446 aa10.66□□□□□ -0.7
LINC00838-201ENST00000562956 MICALL2Q8IY33 904 aa10.66□□□□□ -0.7
LINC00838-201ENST00000562956 IQUBQ8NA54 791 aa10.66□□□□□ -0.7
LINC00838-201ENST00000562956 STAMQ92783 540 aa10.66□□□□□ -0.7
LINC00838-201ENST00000562956 GJA3Q9Y6H8 435 aa10.66□□□□□ -0.7
LINC00838-201ENST00000562956 CAP2P40123 477 aa10.66□□□□□ -0.7
LINC00838-201ENST00000562956 KARSQ15046 597 aaKnown RBP10.66□□□□□ -0.7
LINC00838-201ENST00000562956 SYDE2Q5VT97 1194 aa10.66□□□□□ -0.7
LINC00838-201ENST00000562956 POTEDQ86YR6 584 aa10.66□□□□□ -0.7
LINC00838-201ENST00000562956 MTRQ99707 1265 aa10.66□□□□□ -0.7
LINC00838-201ENST00000562956 ARHGEF10LQ9HCE6 1279 aa10.66□□□□□ -0.7
LINC00838-201ENST00000562956 TMX2Q9Y320 296 aa10.66□□□□□ -0.7
LINC00838-201ENST00000562956 TDP2O95551 362 aa10.65□□□□□ -0.7
LINC00838-201ENST00000562956 MRPL12P52815 198 aaKnown RBP10.65□□□□□ -0.7
LINC00838-201ENST00000562956 MAP3K10Q02779 954 aa10.65□□□□□ -0.7
LINC00838-201ENST00000562956 DPYDQ12882 1025 aa10.65□□□□□ -0.7
LINC00838-201ENST00000562956 TSC1Q92574 1164 aa10.65□□□□□ -0.7
LINC00838-201ENST00000562956 HSD3B7Q9H2F3 369 aa10.65□□□□□ -0.7
LINC00838-201ENST00000562956 TTC12Q9H892 705 aaPredicted RBP10.65□□□□□ -0.7
LINC00838-201ENST00000562956 SYNPO2Q9UMS6 1093 aa10.65□□□□□ -0.7
LINC00838-201ENST00000562956 SMTNL1A8MU46 457 aa10.65□□□□□ -0.7
LINC00838-201ENST00000562956 USP17L15C9J2P7 530 aa10.65□□□□□ -0.7
LINC00838-201ENST00000562956 USP17L13C9JLJ4 530 aa10.65□□□□□ -0.7
LINC00838-201ENST00000562956 USP17L11C9JVI0 530 aa10.65□□□□□ -0.7
LINC00838-201ENST00000562956 USP17L18D6R9N7 530 aa10.65□□□□□ -0.7
LINC00838-201ENST00000562956 USP17L22D6RA61 530 aa10.65□□□□□ -0.7
LINC00838-201ENST00000562956 USP17L17D6RBQ6 530 aa10.65□□□□□ -0.7
LINC00838-201ENST00000562956 USP17L19D6RCP7 530 aa10.65□□□□□ -0.7
LINC00838-201ENST00000562956 USP17L20D6RJB6 530 aa10.65□□□□□ -0.7
LINC00838-201ENST00000562956 IKBKBO14920 756 aa10.65□□□□□ -0.7
LINC00838-201ENST00000562956 SLC37A4O43826 429 aa10.65□□□□□ -0.7
LINC00838-201ENST00000562956 TAL1P17542 331 aaPredicted RBP10.65□□□□□ -0.7
LINC00838-201ENST00000562956 USP17L24Q0WX57 530 aa10.65□□□□□ -0.7
LINC00838-201ENST00000562956 TBC1D10BQ4KMP7 808 aaPredicted RBP10.65□□□□□ -0.7
LINC00838-201ENST00000562956 USP17L6PQ6QN14 398 aa10.65□□□□□ -0.7
LINC00838-201ENST00000562956 BTNL9Q6UXG8 535 aa10.65□□□□□ -0.7
LINC00838-201ENST00000562956 CCDC84Q86UT8 332 aaPredicted RBP10.65□□□□□ -0.7
LINC00838-201ENST00000562956 CCDC34Q96HJ3 373 aa10.65□□□□□ -0.7
LINC00838-201ENST00000562956 TEPSINQ96N21 525 aa10.65□□□□□ -0.7
LINC00838-201ENST00000562956 CNOT7Q9UIV1 285 aaKnown RBP10.65□□□□□ -0.7
LINC00838-201ENST00000562956 ZNF541Q9H0D2 1346 aa10.65□□□□□ -0.71
LINC00838-201ENST00000562956 SMC2O95347 1197 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 TXLNAP40222 546 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.64□□□□□ -0.71
LINC00838-201ENST00000562956 GLIS2Q9BZE0 524 aaPredicted RBP10.64□□□□□ -0.71
LINC00838-201ENST00000562956 BLZF1Q9H2G9 400 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 DISC1Q9NRI5 854 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 NRBP1Q9UHY1 535 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 PHF20L1A8MW92 1017 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 TECP42680 631 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 ORC2Q13416 577 aaPredicted RBP10.64□□□□□ -0.71
LINC00838-201ENST00000562956 ZYXQ15942 572 aaKnown RBP10.64□□□□□ -0.71
LINC00838-201ENST00000562956 USH1GQ495M9 461 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 NAALADL2Q58DX5 795 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 FAM83BQ5T0W9 1011 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 DRC7Q8IY82 874 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 TRIML1Q8N9V2 468 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 DPF2Q92785 391 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 MTMR9Q96QG7 549 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 PLIN2Q99541 437 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 PYM1Q9BRP8 204 aaKnown RBP10.64□□□□□ -0.71
LINC00838-201ENST00000562956 AMNQ9BXJ7 453 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 GOPCQ9HD26 462 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 PRR12Q9ULL5 1215 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 LMOD1P29536 600 aaPredicted RBP10.64□□□□□ -0.71
LINC00838-201ENST00000562956 CDC25BP30305 580 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 UBA7P41226 1012 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 STAT6P42226 847 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 MMP14P50281 582 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 STAT2P52630 851 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 MYL5Q02045 173 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 FMR1Q06787 632 aaKnown RBP eCLIP10.64□□□□□ -0.71
LINC00838-201ENST00000562956 CALCRLQ16602 461 aa10.64□□□□□ -0.71
LINC00838-201ENST00000562956 MLKLQ8NB16 471 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms