RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 SP110Q9HB58 689 aa4.55□□□□□ -1.68
CHD9-207ENST00000562806 APEX2Q9UBZ4 518 aa4.55□□□□□ -1.68
CHD9-207ENST00000562806 ACSL6Q9UKU0 697 aa4.55□□□□□ -1.68
CHD9-207ENST00000562806 GPR55Q9Y2T6 319 aaPredicted RBP4.55□□□□□ -1.68
CHD9-207ENST00000562806 MSRB2Q9Y3D2 182 aa4.55□□□□□ -1.68
CHD9-207ENST00000562806 CARMIL2Q6F5E8 1435 aa4.55□□□□□ -1.68
CHD9-207ENST00000562806 A0A1W2PQJ5 194 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 LRRC10BA6NIK2 292 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 B2RBV5 119 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 PDPK1O15530 556 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 VAMP4O75379 141 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 MPOP05164 745 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 SCG5P05408 212 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 ITGAVP06756 1048 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 IFNGR1P15260 489 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 GTF2A2P52657 109 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 CYP4F8P98187 520 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 NFE2L2Q16236 605 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 SLC10A6Q3KNW5 377 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 HSF5Q4G112 596 aaPredicted RBP4.54□□□□□ -1.68
CHD9-207ENST00000562806 FYB2Q5VWT5 728 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 ZNF227Q86WZ6 799 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 CELF2-AS1Q8N7Q2 184 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 COPS5Q92905 334 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 INTS4Q96HW7 963 aaKnown RBP4.54□□□□□ -1.68
CHD9-207ENST00000562806 SLC26A8Q96RN1 970 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 PPP1R16BQ96T49 567 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 MMP19Q99542 508 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 SLC38A3Q99624 504 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 RNF32Q9H0A6 362 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 ST7Q9NRC1 585 aa4.54□□□□□ -1.68
CHD9-207ENST00000562806 NPHP3-ACAD11A0A0J9YXS1 232 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 OR14I1A6ND48 311 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 ZNF503-AS2A6NEH8 195 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 STXBP3O00186 592 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 NPHS1O60500 1241 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 PEX10O60683 326 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 ERVFC1P60507 584 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 ERVFRD-1P60508 538 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 SCRN1Q12765 414 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 IFRD2Q12894 506 aaPredicted RBP4.53□□□□□ -1.68
CHD9-207ENST00000562806 KCNAB2Q13303 367 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 NR1I3Q14994 352 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 TESK1Q15569 626 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 PKN1Q16512 942 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 LONRF2Q1L5Z9 754 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 DPY19L1Q2PZI1 675 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 ACBD5Q5T8D3 534 aaPredicted RBP4.53□□□□□ -1.68
CHD9-207ENST00000562806 MRM1Q6IN84 353 aaKnown RBP4.53□□□□□ -1.68
CHD9-207ENST00000562806 ZPBP2Q6X784 338 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 CABP7Q86V35 215 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 POU5F2Q8N7G0 328 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 FBXO15Q8NCQ5 510 aaPredicted RBP4.53□□□□□ -1.68
CHD9-207ENST00000562806 TMEM52Q8NDY8 209 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 NUP43Q8NFH3 380 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 MICAL1Q8TDZ2 1067 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 KCTD13Q8WZ19 329 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 FAM84AQ96KN4 292 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 IPO9Q96P70 1041 aaKnown RBP4.53□□□□□ -1.68
CHD9-207ENST00000562806 EPB41L4BQ9H329 900 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 C19orf44Q9H6X5 657 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 PDLIM7Q9NR12 457 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 EBF1Q9UH73 591 aa4.53□□□□□ -1.68
CHD9-207ENST00000562806 MYO1BO43795 1136 aa4.52□□□□□ -1.69
CHD9-207ENST00000562806 PSPNO60542 156 aa4.52□□□□□ -1.69
CHD9-207ENST00000562806 SNRPB2P08579 225 aaKnown RBP4.52□□□□□ -1.69
CHD9-207ENST00000562806 PRKCAP17252 672 aa4.52□□□□□ -1.69
CHD9-207ENST00000562806 TRHRP34981 398 aaPredicted RBP4.52□□□□□ -1.69
CHD9-207ENST00000562806 PDE6BP35913 854 aa4.52□□□□□ -1.69
CHD9-207ENST00000562806 MAP4K2Q12851 820 aa4.52□□□□□ -1.69
CHD9-207ENST00000562806 MLANAQ16655 118 aa4.52□□□□□ -1.69
CHD9-207ENST00000562806 MTERF2Q49AM1 385 aa4.52□□□□□ -1.69
CHD9-207ENST00000562806 SHISA4Q96DD7 197 aa4.52□□□□□ -1.69
CHD9-207ENST00000562806 AARSD1Q9BTE6 412 aaKnown RBP4.52□□□□□ -1.69
CHD9-207ENST00000562806 DCP1AQ9NPI6 582 aaPredicted RBP4.52□□□□□ -1.69
CHD9-207ENST00000562806 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.52□□□□□ -1.69
CHD9-207ENST00000562806 TRAV20A0A0B4J274 112 aa4.51□□□□□ -1.69
CHD9-207ENST00000562806 CCDC163A0A0D9SF12 145 aa4.51□□□□□ -1.69
CHD9-207ENST00000562806 A0A1W2PQU0 124 aa4.51□□□□□ -1.69
CHD9-207ENST00000562806 NOTOA8MTQ0 251 aa4.51□□□□□ -1.69
CHD9-207ENST00000562806 RBAK-RBAKDNI3L0D1 243 aa4.51□□□□□ -1.69
CHD9-207ENST00000562806 MEFVO15553 781 aaPredicted RBP4.51□□□□□ -1.69
CHD9-207ENST00000562806 SRGAP3O43295 1099 aa4.51□□□□□ -1.69
CHD9-207ENST00000562806 APPP05067 770 aa4.51□□□□□ -1.69
CHD9-207ENST00000562806 FGFR1P11362 822 aa4.51□□□□□ -1.69
CHD9-207ENST00000562806 KCNJ6P48051 423 aa4.51□□□□□ -1.69
CHD9-207ENST00000562806 PPP2R2AP63151 447 aa4.51□□□□□ -1.69
CHD9-207ENST00000562806 SERINC3Q13530 473 aa4.51□□□□□ -1.69
CHD9-207ENST00000562806 BTN2A2Q8WVV5 523 aa4.51□□□□□ -1.69
CHD9-207ENST00000562806 LIN37Q96GY3 246 aaPredicted RBP4.51□□□□□ -1.69
CHD9-207ENST00000562806 JMJD8Q96S16 334 aa4.51□□□□□ -1.69
CHD9-207ENST00000562806 MCMBPQ9BTE3 642 aa4.51□□□□□ -1.69
CHD9-207ENST00000562806 SPATA9Q9BWV2 254 aa4.51□□□□□ -1.69
CHD9-207ENST00000562806 NSUN3Q9H649 340 aaKnown RBP4.51□□□□□ -1.69
CHD9-207ENST00000562806 ZNF552Q9H707 407 aaPredicted RBP4.51□□□□□ -1.69
CHD9-207ENST00000562806 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.51□□□□□ -1.69
CHD9-207ENST00000562806 IMPACTQ9P2X3 320 aa4.51□□□□□ -1.69
CHD9-207ENST00000562806 NUDT5Q9UKK9 219 aa4.51□□□□□ -1.69
CHD9-207ENST00000562806 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.5□□□□□ -1.69
CHD9-207ENST00000562806 SEMA7AO75326 666 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms