RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 BLOC1S2Q6QNY1 142 aa19.09■□□□□ 0.65
PKD1-226ENST00000562425 SGMS1Q86VZ5 419 aa19.09■□□□□ 0.65
PKD1-226ENST00000562425 U2AF1L4Q8WU68 220 aaKnown RBP19.09■□□□□ 0.65
PKD1-226ENST00000562425 LZTS2Q9BRK4 669 aa19.09■□□□□ 0.65
PKD1-226ENST00000562425 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.09■□□□□ 0.657e-6■■■□□ 16.7
PKD1-226ENST00000562425 CPVLQ9H3G5 476 aa19.09■□□□□ 0.65
PKD1-226ENST00000562425 JMJD4Q9H9V9 463 aa19.09■□□□□ 0.65
PKD1-226ENST00000562425 GPHNQ9NQX3 736 aaPredicted RBP19.09■□□□□ 0.65
PKD1-226ENST00000562425 FLRT1Q9NZU1 646 aa19.09■□□□□ 0.65
PKD1-226ENST00000562425 DNAJC25-GNG10A0A024R161 153 aa19.08■□□□□ 0.64
PKD1-226ENST00000562425 MSL3Q8N5Y2 521 aaKnown RBP19.08■□□□□ 0.64
PKD1-226ENST00000562425 LRRC2Q9BYS8 371 aa19.08■□□□□ 0.64
PKD1-226ENST00000562425 PAK6Q9NQU5 681 aaPredicted RBP19.08■□□□□ 0.64
PKD1-226ENST00000562425 RBM27Q9P2N5 1060 aaKnown RBP19.08■□□□□ 0.64
PKD1-226ENST00000562425 A0A1W2PPC1 479 aa19.07■□□□□ 0.64
PKD1-226ENST00000562425 POTEB2H3BUK9 544 aa19.07■□□□□ 0.64
PKD1-226ENST00000562425 SGPL1O95470 568 aa19.07■□□□□ 0.64
PKD1-226ENST00000562425 CYP2C19P33261 490 aa19.07■□□□□ 0.64
PKD1-226ENST00000562425 ZNF467Q7Z7K2 595 aaPredicted RBP19.07■□□□□ 0.64
PKD1-226ENST00000562425 FBXO11Q86XK2 927 aa19.07■□□□□ 0.64
PKD1-226ENST00000562425 DEFB118Q96PH6 123 aa19.07■□□□□ 0.64
PKD1-226ENST00000562425 TINF2Q9BSI4 451 aa19.07■□□□□ 0.64
PKD1-226ENST00000562425 MAF1Q9H063 256 aa19.07■□□□□ 0.64
PKD1-226ENST00000562425 PRO3102Q9H379 93 aa19.07■□□□□ 0.64
PKD1-226ENST00000562425 A1CFQ9NQ94 594 aaKnown RBP19.07■□□□□ 0.64
PKD1-226ENST00000562425 ABCB11O95342 1321 aa19.06■□□□□ 0.64
PKD1-226ENST00000562425 IGHA2P01877 340 aa19.06■□□□□ 0.64
PKD1-226ENST00000562425 SMARCA1P28370 1054 aa19.06■□□□□ 0.64
PKD1-226ENST00000562425 COL9A3Q14050 684 aaPredicted RBP19.06■□□□□ 0.64
PKD1-226ENST00000562425 QRICH1Q2TAL8 776 aa19.06■□□□□ 0.64
PKD1-226ENST00000562425 MUM1L1Q5H9M0 696 aa19.06■□□□□ 0.64
PKD1-226ENST00000562425 NSMFQ6X4W1 530 aa19.06■□□□□ 0.64
PKD1-226ENST00000562425 AMNQ9BXJ7 453 aa19.06■□□□□ 0.64
PKD1-226ENST00000562425 RIOX1Q9H6W3 641 aa19.06■□□□□ 0.64
PKD1-226ENST00000562425 NRBP1Q9UHY1 535 aa19.06■□□□□ 0.64
PKD1-226ENST00000562425 ZBTB5O15062 677 aa19.05■□□□□ 0.64
PKD1-226ENST00000562425 TFRCP02786 760 aaKnown RBP19.05■□□□□ 0.64
PKD1-226ENST00000562425 CASTP20810 708 aaKnown RBP19.05■□□□□ 0.64
PKD1-226ENST00000562425 CNGA1P29973 690 aa19.05■□□□□ 0.64
PKD1-226ENST00000562425 USH1GQ495M9 461 aa19.05■□□□□ 0.64
PKD1-226ENST00000562425 MTMR8Q96EF0 704 aa19.05■□□□□ 0.64
PKD1-226ENST00000562425 TCEANC2Q96MN5 208 aa19.05■□□□□ 0.64
PKD1-226ENST00000562425 MYL10Q9BUA6 226 aa19.05■□□□□ 0.64
PKD1-226ENST00000562425 CNPY2Q9Y2B0 182 aa19.05■□□□□ 0.64
PKD1-226ENST00000562425 MRPL11Q9Y3B7 192 aaKnown RBP19.05■□□□□ 0.64
PKD1-226ENST00000562425 MSCO60682 206 aa19.04■□□□□ 0.64
PKD1-226ENST00000562425 RPS6KB1P23443 525 aa19.04■□□□□ 0.64
PKD1-226ENST00000562425 MAMDC4Q6UXC1 1216 aa19.04■□□□□ 0.64
PKD1-226ENST00000562425 RNF207Q6ZRF8 634 aa19.04■□□□□ 0.64
PKD1-226ENST00000562425 MCF2L2Q86YR7 1114 aa19.04■□□□□ 0.64
PKD1-226ENST00000562425 FAM133AQ8N9E0 248 aa19.04■□□□□ 0.64
PKD1-226ENST00000562425 FANCBQ8NB91 859 aa19.04■□□□□ 0.64
PKD1-226ENST00000562425 RGS22Q8NE09 1264 aa19.04■□□□□ 0.64
PKD1-226ENST00000562425 TM6SF1Q9BZW5 370 aa19.04■□□□□ 0.64
PKD1-226ENST00000562425 CYP39A1Q9NYL5 469 aa19.04■□□□□ 0.64
PKD1-226ENST00000562425 ADD3Q9UEY8 706 aaKnown RBP19.04■□□□□ 0.64
PKD1-226ENST00000562425 SYNGAP1Q96PV0 1343 aa19.03■□□□□ 0.64
PKD1-226ENST00000562425 PNMA6FA0A0J9YX94 578 aa19.03■□□□□ 0.64
PKD1-226ENST00000562425 PTPDC1A2A3K4 754 aa19.03■□□□□ 0.64
PKD1-226ENST00000562425 NFIBO00712 420 aa19.03■□□□□ 0.64
PKD1-226ENST00000562425 CYBAP13498 195 aa19.03■□□□□ 0.64
PKD1-226ENST00000562425 CCND3P30281 292 aaPredicted RBP19.03■□□□□ 0.64
PKD1-226ENST00000562425 RCAN1P53805 252 aa19.03■□□□□ 0.64
PKD1-226ENST00000562425 BAATQ14032 418 aaPredicted RBP19.03■□□□□ 0.64
PKD1-226ENST00000562425 APOA5Q6Q788 366 aa19.03■□□□□ 0.64
PKD1-226ENST00000562425 Q6ZUG5 572 aa19.03■□□□□ 0.64
PKD1-226ENST00000562425 MICU3Q86XE3 530 aa19.03■□□□□ 0.64
PKD1-226ENST00000562425 HOMER1Q86YM7 354 aa19.03■□□□□ 0.64
PKD1-226ENST00000562425 FBXL16Q8N461 479 aa19.03■□□□□ 0.64
PKD1-226ENST00000562425 CLEC4DQ8WXI8 215 aa19.03■□□□□ 0.64
PKD1-226ENST00000562425 RRP36Q96EU6 259 aaKnown RBP19.03■□□□□ 0.64
PKD1-226ENST00000562425 PIGSQ96S52 555 aa19.03■□□□□ 0.64
PKD1-226ENST00000562425 SPZ1Q9BXG8 430 aa19.03■□□□□ 0.64
PKD1-226ENST00000562425 ZSWIM6Q9HCJ5 1215 aa19.03■□□□□ 0.64
PKD1-226ENST00000562425 RBM28Q9NW13 759 aaKnown RBP19.03■□□□□ 0.64
PKD1-226ENST00000562425 CYP46A1Q9Y6A2 500 aa19.03■□□□□ 0.64
PKD1-226ENST00000562425 ZNFX1Q9P2E3 1918 aaKnown RBP19.03■□□□□ 0.64
PKD1-226ENST00000562425 ASB14A6NK59 587 aa19.02■□□□□ 0.64
PKD1-226ENST00000562425 ZBTB43O43298 467 aa19.02■□□□□ 0.64
PKD1-226ENST00000562425 EVI5O60447 810 aa19.02■□□□□ 0.64
PKD1-226ENST00000562425 CPA1P15085 419 aa19.02■□□□□ 0.64
PKD1-226ENST00000562425 ANAPC15P60006 121 aa19.02■□□□□ 0.64
PKD1-226ENST00000562425 CNTN2Q02246 1040 aa19.02■□□□□ 0.64
PKD1-226ENST00000562425 PPP2R5BQ15173 497 aa19.02■□□□□ 0.64
PKD1-226ENST00000562425 RUFY3Q7L099 469 aa19.02■□□□□ 0.64
PKD1-226ENST00000562425 CRISPLD2Q9H0B8 497 aa19.02■□□□□ 0.64
PKD1-226ENST00000562425 SEC63Q9UGP8 760 aaKnown RBP19.02■□□□□ 0.64
PKD1-226ENST00000562425 LOC102724159A0A0B4J2E5 919 aa19.01■□□□□ 0.63
PKD1-226ENST00000562425 KLF18A0A0U1RQI7 1052 aa19.01■□□□□ 0.63
PKD1-226ENST00000562425 CYTH3O43739 400 aa19.01■□□□□ 0.63
PKD1-226ENST00000562425 TAL1P17542 331 aaPredicted RBP19.01■□□□□ 0.63
PKD1-226ENST00000562425 RXRAP19793 462 aa19.01■□□□□ 0.63
PKD1-226ENST00000562425 PWP2Q15269 919 aaKnown RBP19.01■□□□□ 0.63
PKD1-226ENST00000562425 CCDC144CPQ8IYA2 1237 aa19.01■□□□□ 0.63
PKD1-226ENST00000562425 ANKLE1Q8NAG6 615 aa19.01■□□□□ 0.63
PKD1-226ENST00000562425 BRF1Q92994 677 aa19.01■□□□□ 0.63
PKD1-226ENST00000562425 MPHOSPH6Q99547 160 aaKnown RBP19.01■□□□□ 0.63
PKD1-226ENST00000562425 DDX20Q9UHI6 824 aaKnown RBP19.01■□□□□ 0.63
PKD1-226ENST00000562425 BRPF3Q9ULD4 1205 aa19.01■□□□□ 0.63
PKD1-226ENST00000562425 NAP1L2Q9ULW6 460 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms