RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 IL23AQ9NPF7 189 aa12.2□□□□□ -0.46
BBS4-205ENST00000562219 GNEQ9Y223 722 aaKnown RBP12.2□□□□□ -0.46
BBS4-205ENST00000562219 NCOR1O75376 2440 aa12.2□□□□□ -0.46
BBS4-205ENST00000562219 SCN10AQ9Y5Y9 1956 aa12.19□□□□□ -0.46
BBS4-205ENST00000562219 MYH6P13533 1939 aa12.19□□□□□ -0.46
BBS4-205ENST00000562219 TTC41PQ6P2S7 1318 aa12.19□□□□□ -0.46
BBS4-205ENST00000562219 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.19□□□□□ -0.46
BBS4-205ENST00000562219 SOWAHBA6NEL2 793 aa12.19□□□□□ -0.46
BBS4-205ENST00000562219 CYP2C18P33260 490 aa12.19□□□□□ -0.46
BBS4-205ENST00000562219 TFAP4Q01664 338 aa12.19□□□□□ -0.46
BBS4-205ENST00000562219 PPARAQ07869 468 aa12.19□□□□□ -0.46
BBS4-205ENST00000562219 RAB30Q15771 203 aa12.19□□□□□ -0.46
BBS4-205ENST00000562219 PPP4R3BQ5MIZ7 849 aa12.19□□□□□ -0.46
BBS4-205ENST00000562219 AKNAD1Q5T1N1 836 aa12.19□□□□□ -0.46
BBS4-205ENST00000562219 DIEXFQ68CQ4 756 aaKnown RBP12.19□□□□□ -0.46
BBS4-205ENST00000562219 CXCL17Q6UXB2 119 aa12.19□□□□□ -0.46
BBS4-205ENST00000562219 SLC43A3Q8NBI5 491 aa12.19□□□□□ -0.46
BBS4-205ENST00000562219 STAG1Q8WVM7 1258 aa12.19□□□□□ -0.46
BBS4-205ENST00000562219 HERVK_113Q902F9 699 aa12.19□□□□□ -0.46
BBS4-205ENST00000562219 AGBL1Q96MI9 1066 aa12.19□□□□□ -0.46
BBS4-205ENST00000562219 TRERF1Q96PN7 1200 aa12.19□□□□□ -0.46
BBS4-205ENST00000562219 SEZ6LQ9BYH1 1024 aa12.19□□□□□ -0.46
BBS4-205ENST00000562219 NAPBQ9H115 298 aa12.19□□□□□ -0.46
BBS4-205ENST00000562219 HIPK3Q9H422 1215 aa12.19□□□□□ -0.46
BBS4-205ENST00000562219 TRANK1O15050 2925 aa12.19□□□□□ -0.46
BBS4-205ENST00000562219 TCF20Q9UGU0 1960 aaKnown RBP12.18□□□□□ -0.46
BBS4-205ENST00000562219 PLA2G6O60733 806 aa12.18□□□□□ -0.46
BBS4-205ENST00000562219 ALAS1P13196 640 aa12.18□□□□□ -0.46
BBS4-205ENST00000562219 MCCP23508 829 aa12.18□□□□□ -0.46
BBS4-205ENST00000562219 ITGA7Q13683 1181 aa12.18□□□□□ -0.46
BBS4-205ENST00000562219 SEC62Q99442 399 aaKnown RBP12.18□□□□□ -0.46
BBS4-205ENST00000562219 FSD1Q9BTV5 496 aa12.18□□□□□ -0.46
BBS4-205ENST00000562219 AP5M1Q9H0R1 490 aa12.18□□□□□ -0.46
BBS4-205ENST00000562219 PRDM12Q9H4Q4 367 aa12.18□□□□□ -0.46
BBS4-205ENST00000562219 CXXC1Q9P0U4 656 aaPredicted RBP12.18□□□□□ -0.46
BBS4-205ENST00000562219 MSRAQ9UJ68 235 aa12.18□□□□□ -0.46
BBS4-205ENST00000562219 STX8Q9UNK0 236 aa12.18□□□□□ -0.46
BBS4-205ENST00000562219 KIAA1217Q5T5P2 1943 aa12.17□□□□□ -0.46
BBS4-205ENST00000562219 GRIN2DO15399 1336 aa12.17□□□□□ -0.46
BBS4-205ENST00000562219 UMODL1Q5DID0 1318 aa12.17□□□□□ -0.46
BBS4-205ENST00000562219 TNFRSF10AO00220 468 aa12.17□□□□□ -0.46
BBS4-205ENST00000562219 ERC2O15083 957 aa12.17□□□□□ -0.46
BBS4-205ENST00000562219 ZEB2O60315 1214 aa12.17□□□□□ -0.46
BBS4-205ENST00000562219 SMPD1P17405 629 aa12.17□□□□□ -0.46
BBS4-205ENST00000562219 ZMYM1Q5SVZ6 1142 aa12.17□□□□□ -0.46
BBS4-205ENST00000562219 KCTD1Q719H9 257 aa12.17□□□□□ -0.46
BBS4-205ENST00000562219 FBXO16Q8IX29 292 aaPredicted RBP12.17□□□□□ -0.46
BBS4-205ENST00000562219 ATXN2LQ8WWM7 1075 aaKnown RBP12.17□□□□□ -0.46
BBS4-205ENST00000562219 NOC4LQ9BVI4 516 aaKnown RBP12.17□□□□□ -0.46
BBS4-205ENST00000562219 CYP39A1Q9NYL5 469 aa12.17□□□□□ -0.46
BBS4-205ENST00000562219 THEGQ9P2T0 379 aa12.17□□□□□ -0.46
BBS4-205ENST00000562219 PRR12Q9ULL5 1215 aa12.17□□□□□ -0.46
BBS4-205ENST00000562219 Q9Y3F1 56 aa12.17□□□□□ -0.46
BBS4-205ENST00000562219 TRIP12Q14669 1992 aaPredicted RBP12.17□□□□□ -0.46
BBS4-205ENST00000562219 LAMA4Q16363 1823 aa12.16□□□□□ -0.46
BBS4-205ENST00000562219 PTPRSQ13332 1948 aa12.16□□□□□ -0.46
BBS4-205ENST00000562219 TSPY2A6NKD2 308 aa12.16□□□□□ -0.46
BBS4-205ENST00000562219 B4GALT4O60513 344 aa12.16□□□□□ -0.46
BBS4-205ENST00000562219 FGBP02675 491 aa12.16□□□□□ -0.46
BBS4-205ENST00000562219 MUM1L1Q5H9M0 696 aa12.16□□□□□ -0.46
BBS4-205ENST00000562219 IQSEC1Q6DN90 963 aa12.16□□□□□ -0.46
BBS4-205ENST00000562219 RCSD1Q6JBY9 416 aa12.16□□□□□ -0.46
BBS4-205ENST00000562219 TAPT1Q6NXT6 567 aa12.16□□□□□ -0.46
BBS4-205ENST00000562219 EEPD1Q7L9B9 569 aa12.16□□□□□ -0.46
BBS4-205ENST00000562219 RASGRP2Q7LDG7 609 aa12.16□□□□□ -0.46
BBS4-205ENST00000562219 PI4K2BQ8TCG2 481 aa12.16□□□□□ -0.46
BBS4-205ENST00000562219 PPM1EQ8WY54 764 aa12.16□□□□□ -0.46
BBS4-205ENST00000562219 CHMP4CQ96CF2 233 aa12.16□□□□□ -0.46
BBS4-205ENST00000562219 TRPV6Q9H1D0 765 aa12.16□□□□□ -0.46
BBS4-205ENST00000562219 WNT8AQ9H1J5 351 aa12.16□□□□□ -0.46
BBS4-205ENST00000562219 SLC28A3Q9HAS3 691 aa12.16□□□□□ -0.46
BBS4-205ENST00000562219 VTA1Q9NP79 307 aa12.16□□□□□ -0.46
BBS4-205ENST00000562219 PDGFCQ9NRA1 345 aa12.16□□□□□ -0.46
BBS4-205ENST00000562219 IL17RBQ9NRM6 502 aa12.16□□□□□ -0.46
BBS4-205ENST00000562219 CCPG1Q9ULG6 757 aa12.16□□□□□ -0.46
BBS4-205ENST00000562219 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.16□□□□□ -0.46
BBS4-205ENST00000562219 DDX49Q9Y6V7 483 aaKnown RBP12.16□□□□□ -0.46
BBS4-205ENST00000562219 FOXP2O15409 715 aa12.15□□□□□ -0.46
BBS4-205ENST00000562219 DYNC1LI2O43237 492 aaPredicted RBP12.15□□□□□ -0.46
BBS4-205ENST00000562219 NMT2O60551 498 aa12.15□□□□□ -0.46
BBS4-205ENST00000562219 ICAM1P05362 532 aa12.15□□□□□ -0.46
BBS4-205ENST00000562219 PTGS1P23219 599 aa12.15□□□□□ -0.46
BBS4-205ENST00000562219 SNAP25P60880 206 aa12.15□□□□□ -0.46
BBS4-205ENST00000562219 ADGRE1Q14246 886 aa12.15□□□□□ -0.46
BBS4-205ENST00000562219 NSMFQ6X4W1 530 aa12.15□□□□□ -0.46
BBS4-205ENST00000562219 OTOP2Q7RTS6 562 aa12.15□□□□□ -0.46
BBS4-205ENST00000562219 MORC4Q8TE76 937 aa12.15□□□□□ -0.46
BBS4-205ENST00000562219 DCAF4Q8WV16 495 aa12.15□□□□□ -0.46
BBS4-205ENST00000562219 ASB2Q96Q27 587 aa12.15□□□□□ -0.46
BBS4-205ENST00000562219 NKX2-4Q9H2Z4 354 aa12.15□□□□□ -0.46
BBS4-205ENST00000562219 YBX2Q9Y2T7 364 aaKnown RBP12.15□□□□□ -0.46
BBS4-205ENST00000562219 COL4A4P53420 1690 aaPredicted RBP12.15□□□□□ -0.46
BBS4-205ENST00000562219 IGFBP4P22692 258 aa12.14□□□□□ -0.47
BBS4-205ENST00000562219 CCL23P55773 120 aa12.14□□□□□ -0.47
BBS4-205ENST00000562219 PSMC6P62333 389 aa12.14□□□□□ -0.47
BBS4-205ENST00000562219 CTDSPL2Q05D32 466 aa12.14□□□□□ -0.47
BBS4-205ENST00000562219 CCDC96Q2M329 555 aa12.14□□□□□ -0.47
BBS4-205ENST00000562219 DUSP28Q4G0W2 176 aa12.14□□□□□ -0.47
BBS4-205ENST00000562219 PPP2R2DQ66LE6 453 aa12.14□□□□□ -0.47
BBS4-205ENST00000562219 KIAA1211Q6ZU35 1233 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms