RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 IL17RBQ9NRM6 502 aa13.21□□□□□ -0.29
PCAT1-202ENST00000561978 DACH1Q9UI36 760 aa13.21□□□□□ -0.29
PCAT1-202ENST00000561978 PAPPA2Q9BXP8 1791 aa13.21□□□□□ -0.3
PCAT1-202ENST00000561978 TTLL13PA6NNM8 815 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 ATP2B1P20020 1258 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 GSDMDP57764 484 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 MDM2Q00987 491 aaPredicted RBP13.2□□□□□ -0.3
PCAT1-202ENST00000561978 PNOCQ13519 176 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 GRM4Q14833 912 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 GALNT17Q6IS24 598 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 ARMC9Q7Z3E5 817 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 TRIML1Q8N9V2 468 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 DYNLL2Q96FJ2 89 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 CLMNQ96JQ2 1002 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 PYM1Q9BRP8 204 aaKnown RBP13.2□□□□□ -0.3
PCAT1-202ENST00000561978 NAV1Q8NEY1 1877 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 ATRNL1Q5VV63 1379 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 hCG_1642624A0A1W2PR95 340 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 POLR2DO15514 142 aaKnown RBP13.2□□□□□ -0.3
PCAT1-202ENST00000561978 PLCD1P51178 756 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 FKBP1BP68106 108 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 POSTNQ15063 836 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 DEFB115Q30KQ5 88 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 TTC38Q5R3I4 469 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 NT5DC1Q5TFE4 455 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 CYP4F22Q6NT55 531 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 C16orf86Q6ZW13 317 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 METTL16Q86W50 562 aaKnown RBP13.2□□□□□ -0.3
PCAT1-202ENST00000561978 TNFRSF25Q93038 417 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 ZKSCAN4Q969J2 545 aaPredicted RBP13.2□□□□□ -0.3
PCAT1-202ENST00000561978 KLRG1Q96E93 195 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 WRNIP1Q96S55 665 aa13.2□□□□□ -0.3
PCAT1-202ENST00000561978 OTOFQ9HC10 1997 aa13.19□□□□□ -0.3
PCAT1-202ENST00000561978 SIPA1L1O43166 1804 aa13.19□□□□□ -0.3
PCAT1-202ENST00000561978 A0A087WWV3 80 aa13.19□□□□□ -0.3
PCAT1-202ENST00000561978 IREB2P48200 963 aaKnown RBP13.19□□□□□ -0.3
PCAT1-202ENST00000561978 MYL5Q02045 173 aa13.19□□□□□ -0.3
PCAT1-202ENST00000561978 CT47A1Q5JQC4 288 aaPredicted RBP13.19□□□□□ -0.3
PCAT1-202ENST00000561978 SHISA4Q96DD7 197 aa13.19□□□□□ -0.3
PCAT1-202ENST00000561978 PRIMPOLQ96LW4 560 aa13.19□□□□□ -0.3
PCAT1-202ENST00000561978 CSRNP2Q9H175 543 aa13.19□□□□□ -0.3
PCAT1-202ENST00000561978 DHX36Q9H2U1 1008 aaKnown RBP13.19□□□□□ -0.3
PCAT1-202ENST00000561978 PI4KBQ9UBF8 816 aa13.19□□□□□ -0.3
PCAT1-202ENST00000561978 NRBP1Q9UHY1 535 aa13.19□□□□□ -0.3
PCAT1-202ENST00000561978 PCDHA5Q9Y5H7 936 aa13.19□□□□□ -0.3
PCAT1-202ENST00000561978 RASSF10A6NK89 507 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 CBFA2T2O43439 604 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 SMC2O95347 1197 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 RASA1P20936 1047 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 INPP5BP32019 993 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 CDK8P49336 464 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 ZNF157P51786 506 aaPredicted RBP13.18□□□□□ -0.3
PCAT1-202ENST00000561978 NPY5RQ15761 445 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 DCAF15Q66K64 600 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 LRRC8AQ8IWT6 810 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 MLKLQ8NB16 471 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 CCDC148Q8NFR7 591 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 NEDD1Q8NHV4 660 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 SMARCE1Q969G3 411 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 PYCARDQ9ULZ3 195 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 DDX60LQ5H9U9 1706 aaKnown RBP13.18□□□□□ -0.3
PCAT1-202ENST00000561978 SMARCA1P28370 1054 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 MKRN3Q13064 507 aaKnown RBP13.18□□□□□ -0.3
PCAT1-202ENST00000561978 NCAPHQ15003 741 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 SPECC1Q5M775 1068 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 RGMBQ6NW40 437 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.18□□□□□ -0.3
PCAT1-202ENST00000561978 BLIDQ8IZY5 108 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.18□□□□□ -0.3
PCAT1-202ENST00000561978 SLC39A7Q92504 469 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 HOOK2Q96ED9 719 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 TMEM47Q9BQJ4 181 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 ZNF341Q9BYN7 854 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 DNAJC18Q9H819 358 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.18□□□□□ -0.3
PCAT1-202ENST00000561978 SERTAD1Q9UHV2 236 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 MAD2L2Q9UI95 211 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 STX8Q9UNK0 236 aa13.18□□□□□ -0.3
PCAT1-202ENST00000561978 COL2A1P02458 1487 aaPredicted RBP13.17□□□□□ -0.3
PCAT1-202ENST00000561978 HLA-DOAP06340 250 aa13.17□□□□□ -0.3
PCAT1-202ENST00000561978 SARSP49591 514 aaKnown RBP13.17□□□□□ -0.3
PCAT1-202ENST00000561978 VEGFBP49765 207 aa13.17□□□□□ -0.3
PCAT1-202ENST00000561978 ATP2C1P98194 919 aaPredicted RBP13.17□□□□□ -0.3
PCAT1-202ENST00000561978 GRIN1Q05586 938 aa13.17□□□□□ -0.3
PCAT1-202ENST00000561978 VGLL4Q14135 290 aa13.17□□□□□ -0.3
PCAT1-202ENST00000561978 LDLRAD1Q5T700 205 aa13.17□□□□□ -0.3
PCAT1-202ENST00000561978 ANKRD13AQ8IZ07 590 aa13.17□□□□□ -0.3
PCAT1-202ENST00000561978 PCDHA4Q9UN74 947 aa13.17□□□□□ -0.3
PCAT1-202ENST00000561978 PALM3A6NDB9 673 aaPredicted RBP13.16□□□□□ -0.3
PCAT1-202ENST00000561978 PHF20L1A8MW92 1017 aa13.16□□□□□ -0.3
PCAT1-202ENST00000561978 NRDCO43847 1150 aa13.16□□□□□ -0.3
PCAT1-202ENST00000561978 SLFN14P0C7P3 912 aa13.16□□□□□ -0.3
PCAT1-202ENST00000561978 C7P10643 843 aa13.16□□□□□ -0.3
PCAT1-202ENST00000561978 PTGDRQ13258 359 aa13.16□□□□□ -0.3
PCAT1-202ENST00000561978 ZNF174Q15697 407 aa13.16□□□□□ -0.3
PCAT1-202ENST00000561978 EARS2Q5JPH6 523 aaKnown RBP13.16□□□□□ -0.3
PCAT1-202ENST00000561978 ARL6IP4Q66PJ3 421 aaKnown RBP13.16□□□□□ -0.3
PCAT1-202ENST00000561978 ISM2Q6H9L7 571 aa13.16□□□□□ -0.3
PCAT1-202ENST00000561978 FOXP4Q8IVH2 680 aaPredicted RBP13.16□□□□□ -0.3
PCAT1-202ENST00000561978 DNAJC5GQ8N7S2 189 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms