RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 PRR20EP86478 221 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 PRR20CP86479 221 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 PRR20DP86480 221 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 PRR20BP86481 221 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 PRR20AP86496 221 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 MAP3K10Q02779 954 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 CEBPZQ03701 1054 aaKnown RBP7.52□□□□□ -1.21
CAPN3-210ENST00000561817 NR5A1Q13285 461 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 TRIM29Q14134 588 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 NOM1Q5C9Z4 860 aaKnown RBP7.52□□□□□ -1.21
CAPN3-210ENST00000561817 ADALQ6DHV7 355 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 CIAPIN1Q6FI81 312 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 CLEC10AQ8IUN9 316 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 SYAP1Q96A49 352 aaPredicted RBP7.52□□□□□ -1.21
CAPN3-210ENST00000561817 LZTS2Q9BRK4 669 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 RBSNQ9H1K0 784 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 CLSTN2Q9H4D0 955 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 RIOX1Q9H6W3 641 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 GRPEL1Q9HAV7 217 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 SH3GLB2Q9NR46 395 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 STX8Q9UNK0 236 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 MYH4Q9Y623 1939 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 FAM196BA6NMK8 535 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 KLRF2D3W0D1 207 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 STXBP3O00186 592 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 WNT7AO00755 349 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 SPTLC2O15270 562 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 PPP6R2O75170 966 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 DGAT1O75907 488 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 TTLL1O95922 423 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 MRE11P49959 708 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 MMP14P50281 582 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 RBM5P52756 815 aaKnown RBP eCLIP7.51□□□□□ -1.21
CAPN3-210ENST00000561817 DLGAP5Q15398 846 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 SF3A1Q15459 793 aaKnown RBP7.51□□□□□ -1.21
CAPN3-210ENST00000561817 PKDCCQ504Y2 493 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 MORN1Q5T089 497 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 L1TD1Q5T7N2 865 aaKnown RBP7.51□□□□□ -1.21
CAPN3-210ENST00000561817 WWC2Q6AWC2 1192 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 ZNF787Q6DD87 383 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 USP17L2Q6R6M4 530 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 FMR1NBQ8N0W7 255 aaPredicted RBP7.51□□□□□ -1.21
CAPN3-210ENST00000561817 DAGLBQ8NCG7 672 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 KCNG4Q8TDN1 519 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 FAM151AQ8WW52 585 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 JDP2Q8WYK2 163 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 MTMR8Q96EF0 704 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 DDX19AQ9NUU7 478 aaKnown RBP7.51□□□□□ -1.21
CAPN3-210ENST00000561817 DACT1Q9NYF0 836 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 NYAP2Q9P242 653 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 HDAC9Q9UKV0 1011 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 GJA3Q9Y6H8 435 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 ZNF541Q9H0D2 1346 aa7.51□□□□□ -1.21
CAPN3-210ENST00000561817 SCN4AP35499 1836 aa7.5□□□□□ -1.21
CAPN3-210ENST00000561817 CLRN2A0PK11 232 aa7.5□□□□□ -1.21
CAPN3-210ENST00000561817 WNT10BO00744 389 aa7.5□□□□□ -1.21
CAPN3-210ENST00000561817 LETM1O95202 739 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-210ENST00000561817 EGFRP00533 1210 aa7.5□□□□□ -1.21
CAPN3-210ENST00000561817 PARP1P09874 1014 aaKnown RBP7.5□□□□□ -1.21
CAPN3-210ENST00000561817 GOLGA8HP0CJ92 632 aa7.5□□□□□ -1.21
CAPN3-210ENST00000561817 CMA1P23946 247 aa7.5□□□□□ -1.21
CAPN3-210ENST00000561817 RPS12P25398 132 aaKnown RBP7.5□□□□□ -1.21
CAPN3-210ENST00000561817 KRT2P35908 639 aa7.5□□□□□ -1.21
CAPN3-210ENST00000561817 GCGRP47871 477 aa7.5□□□□□ -1.21
CAPN3-210ENST00000561817 AKAP17AQ02040 695 aaKnown RBP7.5□□□□□ -1.21
CAPN3-210ENST00000561817 ZNF543Q08ER8 600 aa7.5□□□□□ -1.21
CAPN3-210ENST00000561817 TNIP1Q15025 636 aa7.5□□□□□ -1.21
CAPN3-210ENST00000561817 STK38Q15208 465 aa7.5□□□□□ -1.21
CAPN3-210ENST00000561817 SAFBQ15424 915 aaKnown RBP eCLIP7.5□□□□□ -1.21
CAPN3-210ENST00000561817 CERKLQ49MI3 558 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-210ENST00000561817 ASPRV1Q53RT3 343 aa7.5□□□□□ -1.21
CAPN3-210ENST00000561817 FAM83AQ86UY5 434 aa7.5□□□□□ -1.21
CAPN3-210ENST00000561817 CCAR1Q8IX12 1150 aaKnown RBP7.5□□□□□ -1.21
CAPN3-210ENST00000561817 ANKRD13AQ8IZ07 590 aa7.5□□□□□ -1.21
CAPN3-210ENST00000561817 LRRC47Q8N1G4 583 aaKnown RBP7.5□□□□□ -1.21
CAPN3-210ENST00000561817 NLRP7Q8WX94 980 aa7.5□□□□□ -1.21
CAPN3-210ENST00000561817 DPF2Q92785 391 aa7.5□□□□□ -1.21
CAPN3-210ENST00000561817 PANK2Q9BZ23 570 aa7.5□□□□□ -1.21
CAPN3-210ENST00000561817 CPVLQ9H3G5 476 aa7.5□□□□□ -1.21
CAPN3-210ENST00000561817 BARHL2Q9NY43 387 aa7.5□□□□□ -1.21
CAPN3-210ENST00000561817 CLIP2Q9UDT6 1046 aa7.5□□□□□ -1.21
CAPN3-210ENST00000561817 HERC5Q9UII4 1024 aaKnown RBP7.5□□□□□ -1.21
CAPN3-210ENST00000561817 FBXO2Q9UK22 296 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-210ENST00000561817 HPSEQ9Y251 543 aa7.5□□□□□ -1.21
CAPN3-210ENST00000561817 PCDHB6Q9Y5E3 794 aa7.5□□□□□ -1.21
CAPN3-210ENST00000561817 WDR90Q96KV7 1748 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 TCP10L2B9ZVM9 353 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 EEF2P13639 858 aaKnown RBP7.49□□□□□ -1.21
CAPN3-210ENST00000561817 ME1P48163 572 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 NDUFA8P51970 172 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 EIF6P56537 245 aaKnown RBP7.49□□□□□ -1.21
CAPN3-210ENST00000561817 FAM160A1Q05DH4 1040 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 SEPT2Q15019 361 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 NBPF9Q3BBW0 867 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 RILPL1Q5EBL4 403 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 PLA2G2CQ5R387 149 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 RESP18Q5W5W9 173 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 TTBK2Q6IQ55 1244 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 SHC4Q6S5L8 630 aa7.49□□□□□ -1.21
CAPN3-210ENST00000561817 TMEM179Q6ZVK1 233 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms