RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 MAD2L2Q9UI95 211 aa11.78□□□□□ -0.52
HERC1-212ENST00000561348 CNPY2Q9Y2B0 182 aa11.78□□□□□ -0.52
HERC1-212ENST00000561348 DDX49Q9Y6V7 483 aaKnown RBP11.78□□□□□ -0.52
HERC1-212ENST00000561348 PLXNA1Q9UIW2 1896 aa11.77□□□□□ -0.53
HERC1-212ENST00000561348 SH2B2O14492 632 aaPredicted RBP11.77□□□□□ -0.53
HERC1-212ENST00000561348 GRM4Q14833 912 aa11.77□□□□□ -0.53
HERC1-212ENST00000561348 ZNF792Q3KQV3 632 aa11.77□□□□□ -0.53
HERC1-212ENST00000561348 OLFML2BQ68BL8 750 aa11.77□□□□□ -0.53
HERC1-212ENST00000561348 DHX32Q7L7V1 743 aaKnown RBP11.77□□□□□ -0.53
HERC1-212ENST00000561348 FBXO11Q86XK2 927 aa11.77□□□□□ -0.53
HERC1-212ENST00000561348 DPF3Q92784 378 aa11.77□□□□□ -0.53
HERC1-212ENST00000561348 SHISA4Q96DD7 197 aa11.77□□□□□ -0.53
HERC1-212ENST00000561348 PIGSQ96S52 555 aa11.77□□□□□ -0.53
HERC1-212ENST00000561348 JMJD4Q9H9V9 463 aa11.77□□□□□ -0.53
HERC1-212ENST00000561348 PAK6Q9NQU5 681 aaPredicted RBP11.77□□□□□ -0.53
HERC1-212ENST00000561348 SNX14Q9Y5W7 946 aa11.77□□□□□ -0.53
HERC1-212ENST00000561348 SMCHD1A6NHR9 2005 aa11.77□□□□□ -0.53
HERC1-212ENST00000561348 MYH6P13533 1939 aa11.76□□□□□ -0.53
HERC1-212ENST00000561348 CASTP20810 708 aaKnown RBP11.76□□□□□ -0.53
HERC1-212ENST00000561348 KIF5BP33176 963 aa11.76□□□□□ -0.53
HERC1-212ENST00000561348 HSPA4P34932 840 aa11.76□□□□□ -0.53
HERC1-212ENST00000561348 RGS19P49795 217 aa11.76□□□□□ -0.53
HERC1-212ENST00000561348 BLOC1S2Q6QNY1 142 aa11.76□□□□□ -0.53
HERC1-212ENST00000561348 RNF207Q6ZRF8 634 aa11.76□□□□□ -0.53
HERC1-212ENST00000561348 TMTC2Q8N394 836 aa11.76□□□□□ -0.53
HERC1-212ENST00000561348 TRPV1Q8NER1 839 aa11.76□□□□□ -0.53
HERC1-212ENST00000561348 PAWRQ96IZ0 340 aaKnown RBP11.76□□□□□ -0.53
HERC1-212ENST00000561348 DDX20Q9UHI6 824 aaKnown RBP11.76□□□□□ -0.53
HERC1-212ENST00000561348 BAZ2BQ9UIF8 2168 aaKnown RBP11.76□□□□□ -0.53
HERC1-212ENST00000561348 PFASO15067 1338 aa11.76□□□□□ -0.53
HERC1-212ENST00000561348 KLF18A0A0U1RQI7 1052 aa11.75□□□□□ -0.53
HERC1-212ENST00000561348 hCG_1642624A0A1W2PR95 340 aa11.75□□□□□ -0.53
HERC1-212ENST00000561348 PALM3A6NDB9 673 aaPredicted RBP11.75□□□□□ -0.53
HERC1-212ENST00000561348 SOWAHBA6NEL2 793 aa11.75□□□□□ -0.53
HERC1-212ENST00000561348 DDAH1O94760 285 aa11.75□□□□□ -0.53
HERC1-212ENST00000561348 CFBP00751 764 aa11.75□□□□□ -0.53
HERC1-212ENST00000561348 CYBAP13498 195 aa11.75□□□□□ -0.53
HERC1-212ENST00000561348 TROAPQ12815 778 aa11.75□□□□□ -0.53
HERC1-212ENST00000561348 MAP3K21Q5TCX8 1036 aa11.75□□□□□ -0.53
HERC1-212ENST00000561348 SLC30A10Q6XR72 485 aa11.75□□□□□ -0.53
HERC1-212ENST00000561348 Q6ZUG5 572 aa11.75□□□□□ -0.53
HERC1-212ENST00000561348 DIS3LQ8TF46 1054 aaKnown RBP11.75□□□□□ -0.53
HERC1-212ENST00000561348 LENG1Q96BZ8 264 aaPredicted RBP11.75□□□□□ -0.53
HERC1-212ENST00000561348 AMNQ9BXJ7 453 aa11.75□□□□□ -0.53
HERC1-212ENST00000561348 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.75□□□□□ -0.53
HERC1-212ENST00000561348 CYP39A1Q9NYL5 469 aa11.75□□□□□ -0.53
HERC1-212ENST00000561348 SEC63Q9UGP8 760 aaKnown RBP11.75□□□□□ -0.53
HERC1-212ENST00000561348 DIS3Q9Y2L1 958 aaKnown RBP11.75□□□□□ -0.53
HERC1-212ENST00000561348 DNAJC25-GNG10A0A024R161 153 aa11.74□□□□□ -0.53
HERC1-212ENST00000561348 ZBTB43O43298 467 aa11.74□□□□□ -0.53
HERC1-212ENST00000561348 PLEKHA8P1O95397 391 aa11.74□□□□□ -0.53
HERC1-212ENST00000561348 HMGB1P09429 215 aaKnown RBP11.74□□□□□ -0.53
HERC1-212ENST00000561348 CALM1P0DP23 149 aa11.74□□□□□ -0.53
HERC1-212ENST00000561348 CALM2P0DP24 149 aa11.74□□□□□ -0.53
HERC1-212ENST00000561348 CALM3P0DP25 149 aa11.74□□□□□ -0.53
HERC1-212ENST00000561348 RARBP10826 455 aa11.74□□□□□ -0.53
HERC1-212ENST00000561348 PSMA5P28066 241 aa11.74□□□□□ -0.53
HERC1-212ENST00000561348 RPS6P62753 249 aaKnown RBP11.74□□□□□ -0.53
HERC1-212ENST00000561348 APOBRQ0VD83 1088 aa11.74□□□□□ -0.53
HERC1-212ENST00000561348 GJC2Q5T442 439 aaPredicted RBP11.74□□□□□ -0.53
HERC1-212ENST00000561348 ARMCX2Q7L311 632 aa11.74□□□□□ -0.53
HERC1-212ENST00000561348 NECAB2Q7Z6G3 386 aa11.74□□□□□ -0.53
HERC1-212ENST00000561348 TBC1D5Q92609 795 aa11.74□□□□□ -0.53
HERC1-212ENST00000561348 RRP36Q96EU6 259 aaKnown RBP11.74□□□□□ -0.53
HERC1-212ENST00000561348 LARP6Q9BRS8 491 aaKnown RBP11.74□□□□□ -0.53
HERC1-212ENST00000561348 USP26Q9BXU7 913 aa11.74□□□□□ -0.53
HERC1-212ENST00000561348 PNMA2Q9UL42 364 aa11.74□□□□□ -0.53
HERC1-212ENST00000561348 MRPL11Q9Y3B7 192 aaKnown RBP11.74□□□□□ -0.53
HERC1-212ENST00000561348 PCDHA1Q9Y5I3 950 aa11.74□□□□□ -0.53
HERC1-212ENST00000561348 ABCB11O95342 1321 aa11.74□□□□□ -0.53
HERC1-212ENST00000561348 ZNF236Q9UL36 1845 aa11.74□□□□□ -0.53
HERC1-212ENST00000561348 ASB14A6NK59 587 aa11.73□□□□□ -0.53
HERC1-212ENST00000561348 GOLGA8AA7E2F4 631 aa11.73□□□□□ -0.53
HERC1-212ENST00000561348 GOLGA8BA8MQT2 603 aa11.73□□□□□ -0.53
HERC1-212ENST00000561348 ZBTB5O15062 677 aa11.73□□□□□ -0.53
HERC1-212ENST00000561348 SEPT4O43236 478 aa11.73□□□□□ -0.53
HERC1-212ENST00000561348 MCM3APO60318 1980 aa11.73□□□□□ -0.53
HERC1-212ENST00000561348 SNAI1O95863 264 aaPredicted RBP11.73□□□□□ -0.53
HERC1-212ENST00000561348 PGK1P00558 417 aa11.73□□□□□ -0.53
HERC1-212ENST00000561348 LIFRP42702 1097 aa11.73□□□□□ -0.53
HERC1-212ENST00000561348 GNAQP50148 359 aa11.73□□□□□ -0.53
HERC1-212ENST00000561348 PDE4DQ08499 809 aa11.73□□□□□ -0.53
HERC1-212ENST00000561348 ACVR2BQ13705 512 aa11.73□□□□□ -0.53
HERC1-212ENST00000561348 FAM133AQ8N9E0 248 aa11.73□□□□□ -0.53
HERC1-212ENST00000561348 FANCBQ8NB91 859 aa11.73□□□□□ -0.53
HERC1-212ENST00000561348 WDR19Q8NEZ3 1342 aa11.73□□□□□ -0.53
HERC1-212ENST00000561348 CLEC4DQ8WXI8 215 aa11.73□□□□□ -0.53
HERC1-212ENST00000561348 BRF1Q92994 677 aa11.73□□□□□ -0.53
HERC1-212ENST00000561348 FERMT2Q96AC1 680 aa11.73□□□□□ -0.53
HERC1-212ENST00000561348 UPF3BQ9BZI7 483 aaKnown RBP11.73□□□□□ -0.53
HERC1-212ENST00000561348 XPNPEP3Q9NQH7 507 aa11.73□□□□□ -0.53
HERC1-212ENST00000561348 ADD3Q9UEY8 706 aaKnown RBP11.73□□□□□ -0.53
HERC1-212ENST00000561348 BRPF3Q9ULD4 1205 aa11.73□□□□□ -0.53
HERC1-212ENST00000561348 FAM184BQ9ULE4 1060 aa11.73□□□□□ -0.53
HERC1-212ENST00000561348 RBBP6Q7Z6E9 1792 aaKnown RBP11.72□□□□□ -0.53
HERC1-212ENST00000561348 PNMA6FA0A0J9YX94 578 aa11.72□□□□□ -0.53
HERC1-212ENST00000561348 KBTBD13C9JR72 458 aa11.72□□□□□ -0.53
HERC1-212ENST00000561348 CYTH3O43739 400 aa11.72□□□□□ -0.53
HERC1-212ENST00000561348 MSCO60682 206 aa11.72□□□□□ -0.53
HERC1-212ENST00000561348 PPFIA3O75145 1194 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms