RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 SHCBP1Q8NEM2 672 aa11.9□□□□□ -0.5
LRRC28-221ENST00000561276 GTF3C6Q969F1 213 aa11.9□□□□□ -0.5
LRRC28-221ENST00000561276 TMX3Q96JJ7 454 aa11.9□□□□□ -0.5
LRRC28-221ENST00000561276 TRERF1Q96PN7 1200 aa11.9□□□□□ -0.5
LRRC28-221ENST00000561276 AMNQ9BXJ7 453 aa11.9□□□□□ -0.5
LRRC28-221ENST00000561276 ARHGAP39Q9C0H5 1083 aa11.9□□□□□ -0.5
LRRC28-221ENST00000561276 MROH8Q9H579 483 aa11.9□□□□□ -0.5
LRRC28-221ENST00000561276 EFCC1Q9HA90 598 aa11.9□□□□□ -0.5
LRRC28-221ENST00000561276 SH2B1Q9NRF2 756 aaPredicted RBP11.9□□□□□ -0.5
LRRC28-221ENST00000561276 SEC63Q9UGP8 760 aaKnown RBP11.9□□□□□ -0.5
LRRC28-221ENST00000561276 PNMA2Q9UL42 364 aa11.9□□□□□ -0.5
LRRC28-221ENST00000561276 PCDHA1Q9Y5I3 950 aa11.9□□□□□ -0.5
LRRC28-221ENST00000561276 DOCK3Q8IZD9 2030 aa11.89□□□□□ -0.51
LRRC28-221ENST00000561276 FMNL1O95466 1100 aaPredicted RBP11.89□□□□□ -0.51
LRRC28-221ENST00000561276 CTDNEP1O95476 244 aa11.89□□□□□ -0.51
LRRC28-221ENST00000561276 TAL1P17542 331 aaPredicted RBP11.89□□□□□ -0.51
LRRC28-221ENST00000561276 CTGFP29279 349 aa11.89□□□□□ -0.51
LRRC28-221ENST00000561276 MAPK4P31152 587 aa11.89□□□□□ -0.51
LRRC28-221ENST00000561276 CAP1Q01518 475 aa11.89□□□□□ -0.51
LRRC28-221ENST00000561276 AKAP17AQ02040 695 aaKnown RBP11.89□□□□□ -0.51
LRRC28-221ENST00000561276 CCDC83Q8IWF9 413 aa11.89□□□□□ -0.51
LRRC28-221ENST00000561276 CD99L2Q8TCZ2 262 aa11.89□□□□□ -0.51
LRRC28-221ENST00000561276 COA7Q96BR5 231 aa11.89□□□□□ -0.51
LRRC28-221ENST00000561276 ERO1AQ96HE7 468 aa11.89□□□□□ -0.51
LRRC28-221ENST00000561276 SLC26A6Q9BXS9 759 aa11.89□□□□□ -0.51
LRRC28-221ENST00000561276 HOMER2Q9NSB8 354 aa11.89□□□□□ -0.51
LRRC28-221ENST00000561276 STRNO43815 780 aa11.88□□□□□ -0.51
LRRC28-221ENST00000561276 CDKL5O76039 1030 aa11.88□□□□□ -0.51
LRRC28-221ENST00000561276 COPB2P35606 906 aa11.88□□□□□ -0.51
LRRC28-221ENST00000561276 FCGRTP55899 365 aa11.88□□□□□ -0.51
LRRC28-221ENST00000561276 ST3GAL1Q11201 340 aa11.88□□□□□ -0.51
LRRC28-221ENST00000561276 TRAF1Q13077 416 aa11.88□□□□□ -0.51
LRRC28-221ENST00000561276 PKN1Q16512 942 aa11.88□□□□□ -0.51
LRRC28-221ENST00000561276 TKFCQ3LXA3 575 aa11.88□□□□□ -0.51
LRRC28-221ENST00000561276 MUM1L1Q5H9M0 696 aa11.88□□□□□ -0.51
LRRC28-221ENST00000561276 GPR142Q7Z601 462 aa11.88□□□□□ -0.51
LRRC28-221ENST00000561276 PLEKHH3Q7Z736 793 aa11.88□□□□□ -0.51
LRRC28-221ENST00000561276 TRIM22Q8IYM9 498 aa11.88□□□□□ -0.51
LRRC28-221ENST00000561276 CHST13Q8NET6 341 aa11.88□□□□□ -0.51
LRRC28-221ENST00000561276 SNX21Q969T3 373 aa11.88□□□□□ -0.51
LRRC28-221ENST00000561276 TRIM47Q96LD4 638 aa11.88□□□□□ -0.51
LRRC28-221ENST00000561276 RNF26Q9BY78 433 aaPredicted RBP11.88□□□□□ -0.51
LRRC28-221ENST00000561276 CWC22Q9HCG8 908 aaKnown RBP11.88□□□□□ -0.51
LRRC28-221ENST00000561276 IVNS1ABPQ9Y6Y0 642 aa11.88□□□□□ -0.51
LRRC28-221ENST00000561276 PLXNA1Q9UIW2 1896 aa11.88□□□□□ -0.51
LRRC28-221ENST00000561276 ABCB11O95342 1321 aa11.87□□□□□ -0.51
LRRC28-221ENST00000561276 TNPO2O14787 897 aaKnown RBP11.87□□□□□ -0.51
LRRC28-221ENST00000561276 FCER1AP12319 257 aa11.87□□□□□ -0.51
LRRC28-221ENST00000561276 SCG2P13521 617 aa11.87□□□□□ -0.51
LRRC28-221ENST00000561276 PTPREP23469 700 aa11.87□□□□□ -0.51
LRRC28-221ENST00000561276 ARHGEF6Q15052 776 aa11.87□□□□□ -0.51
LRRC28-221ENST00000561276 PFKFB3Q16875 520 aaPredicted RBP11.87□□□□□ -0.51
LRRC28-221ENST00000561276 HEATR3Q7Z4Q2 680 aa11.87□□□□□ -0.51
LRRC28-221ENST00000561276 NSUN7Q8NE18 718 aaKnown RBP11.87□□□□□ -0.51
LRRC28-221ENST00000561276 CLEC4DQ8WXI8 215 aa11.87□□□□□ -0.51
LRRC28-221ENST00000561276 TBC1D5Q92609 795 aa11.87□□□□□ -0.51
LRRC28-221ENST00000561276 ACAD9Q9H845 621 aa11.87□□□□□ -0.51
LRRC28-221ENST00000561276 RNF146Q9NTX7 359 aa11.87□□□□□ -0.51
LRRC28-221ENST00000561276 RBM27Q9P2N5 1060 aaKnown RBP11.87□□□□□ -0.51
LRRC28-221ENST00000561276 FBXO40Q9UH90 709 aa11.87□□□□□ -0.51
LRRC28-221ENST00000561276 MRPL11Q9Y3B7 192 aaKnown RBP11.87□□□□□ -0.51
LRRC28-221ENST00000561276 RBBP6Q7Z6E9 1792 aaKnown RBP11.87□□□□□ -0.51
LRRC28-221ENST00000561276 NFIBO00712 420 aa11.86□□□□□ -0.51
LRRC28-221ENST00000561276 DEXIO95424 95 aa11.86□□□□□ -0.51
LRRC28-221ENST00000561276 GNRH1P01148 92 aa11.86□□□□□ -0.51
LRRC28-221ENST00000561276 FDPSP14324 419 aaKnown RBP11.86□□□□□ -0.51
LRRC28-221ENST00000561276 WWC2Q6AWC2 1192 aa11.86□□□□□ -0.51
LRRC28-221ENST00000561276 ANKRD35Q8N283 1001 aa11.86□□□□□ -0.51
LRRC28-221ENST00000561276 GPKOWQ92917 476 aaPredicted RBP eCLIP11.86□□□□□ -0.51
LRRC28-221ENST00000561276 DDX11Q96FC9 970 aa11.86□□□□□ -0.51
LRRC28-221ENST00000561276 LLPHQ9BRT6 129 aaKnown RBP11.86□□□□□ -0.51
LRRC28-221ENST00000561276 ORC3Q9UBD5 711 aaPredicted RBP11.86□□□□□ -0.51
LRRC28-221ENST00000561276 GJD2Q9UKL4 321 aa11.86□□□□□ -0.51
LRRC28-221ENST00000561276 GABRQQ9UN88 632 aa11.86□□□□□ -0.51
LRRC28-221ENST00000561276 PTPDC1A2A3K4 754 aa11.85□□□□□ -0.51
LRRC28-221ENST00000561276 SLC15A5A6NIM6 579 aa11.85□□□□□ -0.51
LRRC28-221ENST00000561276 K7ELQ4 463 aaPredicted RBP11.85□□□□□ -0.51
LRRC28-221ENST00000561276 JAK2O60674 1132 aa11.85□□□□□ -0.51
LRRC28-221ENST00000561276 CFBP00751 764 aa11.85□□□□□ -0.51
LRRC28-221ENST00000561276 HOXD10P28358 340 aa11.85□□□□□ -0.51
LRRC28-221ENST00000561276 KCTD2Q14681 263 aa11.85□□□□□ -0.51
LRRC28-221ENST00000561276 MORN1Q5T089 497 aa11.85□□□□□ -0.51
LRRC28-221ENST00000561276 NSMFQ6X4W1 530 aa11.85□□□□□ -0.51
LRRC28-221ENST00000561276 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.85□□□□□ -0.51
LRRC28-221ENST00000561276 DPP9Q86TI2 863 aa11.85□□□□□ -0.51
LRRC28-221ENST00000561276 MCF2L2Q86YR7 1114 aa11.85□□□□□ -0.51
LRRC28-221ENST00000561276 ABRAQ8N0Z2 381 aa11.85□□□□□ -0.51
LRRC28-221ENST00000561276 RGS22Q8NE09 1264 aa11.85□□□□□ -0.51
LRRC28-221ENST00000561276 SMARCC2Q8TAQ2 1214 aa11.85□□□□□ -0.51
LRRC28-221ENST00000561276 AIFM3Q96NN9 605 aa11.85□□□□□ -0.51
LRRC28-221ENST00000561276 MMP19Q99542 508 aa11.85□□□□□ -0.51
LRRC28-221ENST00000561276 NUDT12Q9BQG2 462 aa11.85□□□□□ -0.51
LRRC28-221ENST00000561276 BARHL2Q9NY43 387 aa11.85□□□□□ -0.51
LRRC28-221ENST00000561276 SMCO2A6NFE2 343 aa11.84□□□□□ -0.51
LRRC28-221ENST00000561276 hCG_1984214I3L0E3 225 aa11.84□□□□□ -0.51
LRRC28-221ENST00000561276 STXBP3O00186 592 aa11.84□□□□□ -0.51
LRRC28-221ENST00000561276 OPLAHO14841 1288 aa11.84□□□□□ -0.51
LRRC28-221ENST00000561276 COBLO75128 1261 aa11.84□□□□□ -0.51
LRRC28-221ENST00000561276 PGK2P07205 417 aa11.84□□□□□ -0.51
LRRC28-221ENST00000561276 ADORA2AP29274 412 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms