RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 PTGS1P23219 599 aa18.75■□□□□ 0.59
LMX1B-204ENST00000561065 NT5C2P49902 561 aa18.75■□□□□ 0.59
LMX1B-204ENST00000561065 CCDC144BQ3MJ40 725 aa18.75■□□□□ 0.59
LMX1B-204ENST00000561065 C1orf53Q5VUE5 145 aa18.75■□□□□ 0.59
LMX1B-204ENST00000561065 RNF180Q86T96 592 aa18.75■□□□□ 0.59
LMX1B-204ENST00000561065 TDHQ8IZJ6 230 aa18.75■□□□□ 0.59
LMX1B-204ENST00000561065 UBE2OQ9C0C9 1292 aaKnown RBP18.75■□□□□ 0.59
LMX1B-204ENST00000561065 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.74■□□□□ 0.59
LMX1B-204ENST00000561065 CTAGE5O15320 804 aa18.74■□□□□ 0.59
LMX1B-204ENST00000561065 DUSP11O75319 330 aaKnown RBP18.74■□□□□ 0.59
LMX1B-204ENST00000561065 GOLGA8HP0CJ92 632 aa18.74■□□□□ 0.59
LMX1B-204ENST00000561065 IMMTQ16891 758 aaKnown RBP18.74■□□□□ 0.59
LMX1B-204ENST00000561065 NSMFQ6X4W1 530 aa18.74■□□□□ 0.59
LMX1B-204ENST00000561065 SH3RF1Q7Z6J0 888 aa18.74■□□□□ 0.59
LMX1B-204ENST00000561065 DGKHQ86XP1 1220 aa18.74■□□□□ 0.59
LMX1B-204ENST00000561065 ENAHQ8N8S7 591 aaPredicted RBP18.74■□□□□ 0.59
LMX1B-204ENST00000561065 CLEC4DQ8WXI8 215 aa18.74■□□□□ 0.59
LMX1B-204ENST00000561065 CTNNA3Q9UI47 895 aa18.74■□□□□ 0.59
LMX1B-204ENST00000561065 TNKSO95271 1327 aa18.74■□□□□ 0.59
LMX1B-204ENST00000561065 CHMLP26374 656 aa18.74■□□□□ 0.59
LMX1B-204ENST00000561065 CST5P28325 142 aaPredicted RBP18.74■□□□□ 0.59
LMX1B-204ENST00000561065 PTH1RQ03431 593 aa18.74■□□□□ 0.59
LMX1B-204ENST00000561065 SLC30A10Q6XR72 485 aa18.74■□□□□ 0.59
LMX1B-204ENST00000561065 CENPQQ7L2Z9 268 aaPredicted RBP18.74■□□□□ 0.59
LMX1B-204ENST00000561065 PNMA1Q8ND90 353 aa18.74■□□□□ 0.59
LMX1B-204ENST00000561065 UPF3AQ9H1J1 476 aaKnown RBP18.74■□□□□ 0.59
LMX1B-204ENST00000561065 ZSWIM5Q9P217 1185 aa18.74■□□□□ 0.59
LMX1B-204ENST00000561065 TAF6LQ9Y6J9 622 aa18.74■□□□□ 0.59
LMX1B-204ENST00000561065 COL6A3P12111 3177 aa18.73■□□□□ 0.59
LMX1B-204ENST00000561065 TRIM43BA6NCK2 446 aa18.73■□□□□ 0.59
LMX1B-204ENST00000561065 ACLYP53396 1101 aa18.73■□□□□ 0.59
LMX1B-204ENST00000561065 TLE2Q04725 743 aa18.73■□□□□ 0.59
LMX1B-204ENST00000561065 TMEM63BQ5T3F8 832 aa18.73■□□□□ 0.59
LMX1B-204ENST00000561065 IQCA1Q86XH1 822 aa18.73■□□□□ 0.59
LMX1B-204ENST00000561065 FBXO16Q8IX29 292 aaPredicted RBP18.73■□□□□ 0.59
LMX1B-204ENST00000561065 ANKS1AQ92625 1134 aa18.73■□□□□ 0.59
LMX1B-204ENST00000561065 TRIM43Q96BQ3 446 aaPredicted RBP18.73■□□□□ 0.59
LMX1B-204ENST00000561065 ZSCAN10Q96SZ4 725 aaPredicted RBP18.73■□□□□ 0.59
LMX1B-204ENST00000561065 PRDM5Q9NQX1 630 aaPredicted RBP18.73■□□□□ 0.59
LMX1B-204ENST00000561065 WDR19Q8NEZ3 1342 aa18.72■□□□□ 0.59
LMX1B-204ENST00000561065 ITGB8P26012 769 aa18.72■□□□□ 0.59
LMX1B-204ENST00000561065 GJA9P57773 515 aa18.72■□□□□ 0.59
LMX1B-204ENST00000561065 BAATQ14032 418 aaPredicted RBP18.72■□□□□ 0.59
LMX1B-204ENST00000561065 KCNA10Q16322 511 aa18.72■□□□□ 0.59
LMX1B-204ENST00000561065 LRIT3Q3SXY7 679 aa18.72■□□□□ 0.59
LMX1B-204ENST00000561065 CYB5R4Q7L1T6 521 aa18.72■□□□□ 0.59
LMX1B-204ENST00000561065 MORC4Q8TE76 937 aa18.72■□□□□ 0.59
LMX1B-204ENST00000561065 TSEN34Q9BSV6 310 aaKnown RBP18.72■□□□□ 0.59
LMX1B-204ENST00000561065 UBA5Q9GZZ9 404 aa18.72■□□□□ 0.59
LMX1B-204ENST00000561065 PDGFCQ9NRA1 345 aa18.72■□□□□ 0.59
LMX1B-204ENST00000561065 ASB14A6NK59 587 aa18.71■□□□□ 0.59
LMX1B-204ENST00000561065 CENPBP07199 599 aaPredicted RBP18.71■□□□□ 0.59
LMX1B-204ENST00000561065 C6orf222P0C671 652 aaPredicted RBP18.71■□□□□ 0.59
LMX1B-204ENST00000561065 GPATCH4Q5T3I0 446 aaKnown RBP18.71■□□□□ 0.59
LMX1B-204ENST00000561065 TAPT1Q6NXT6 567 aa18.71■□□□□ 0.59
LMX1B-204ENST00000561065 EEPD1Q7L9B9 569 aa18.71■□□□□ 0.59
LMX1B-204ENST00000561065 KAT14Q9H8E8 782 aa18.71■□□□□ 0.59
LMX1B-204ENST00000561065 GNEQ9Y223 722 aaKnown RBP18.71■□□□□ 0.59
LMX1B-204ENST00000561065 MOXD2PA6NHM9 499 aa18.7■□□□□ 0.58
LMX1B-204ENST00000561065 SGSM2O43147 1006 aa18.7■□□□□ 0.58
LMX1B-204ENST00000561065 PQBP1O60828 265 aaKnown RBP18.7■□□□□ 0.58
LMX1B-204ENST00000561065 CYP21A2P08686 494 aa18.7■□□□□ 0.58
LMX1B-204ENST00000561065 ALDH5A1P51649 535 aaPredicted RBP18.7■□□□□ 0.58
LMX1B-204ENST00000561065 NKX3-2P78367 333 aa18.7■□□□□ 0.58
LMX1B-204ENST00000561065 SEC23AQ15436 765 aa18.7■□□□□ 0.58
LMX1B-204ENST00000561065 KRT23Q9C075 422 aa18.7■□□□□ 0.58
LMX1B-204ENST00000561065 STARD7Q9NQZ5 370 aa18.7■□□□□ 0.58
LMX1B-204ENST00000561065 PTPDC1A2A3K4 754 aa18.69■□□□□ 0.58
LMX1B-204ENST00000561065 ASGR1P07306 291 aa18.69■□□□□ 0.58
LMX1B-204ENST00000561065 CLTBP09497 229 aa18.69■□□□□ 0.58
LMX1B-204ENST00000561065 SMPD1P17405 629 aa18.69■□□□□ 0.58
LMX1B-204ENST00000561065 BEX3Q00994 111 aa18.69■□□□□ 0.58
LMX1B-204ENST00000561065 TNFAIP2Q03169 654 aa18.69■□□□□ 0.58
LMX1B-204ENST00000561065 CDC37Q16543 378 aaPredicted RBP18.69■□□□□ 0.58
LMX1B-204ENST00000561065 USH1GQ495M9 461 aa18.69■□□□□ 0.58
LMX1B-204ENST00000561065 CCDC178Q5BJE1 867 aa18.69■□□□□ 0.58
LMX1B-204ENST00000561065 STOX1Q6ZVD7 989 aa18.69■□□□□ 0.58
LMX1B-204ENST00000561065 SKAP1Q86WV1 359 aa18.69■□□□□ 0.58
LMX1B-204ENST00000561065 BADQ92934 168 aa18.69■□□□□ 0.58
LMX1B-204ENST00000561065 CCDC136Q96JN2 1154 aa18.69■□□□□ 0.58
LMX1B-204ENST00000561065 LBHD1Q9BQE6 289 aaPredicted RBP18.69■□□□□ 0.58
LMX1B-204ENST00000561065 CNNM2Q9H8M5 875 aa18.69■□□□□ 0.58
LMX1B-204ENST00000561065 PRKAG2Q9UGJ0 569 aa18.69■□□□□ 0.58
LMX1B-204ENST00000561065 CALML3P27482 149 aa18.68■□□□□ 0.58
LMX1B-204ENST00000561065 RPS6P62753 249 aaKnown RBP18.68■□□□□ 0.58
LMX1B-204ENST00000561065 ASPRV1Q53RT3 343 aa18.68■□□□□ 0.58
LMX1B-204ENST00000561065 ANKRD33Q7Z3H0 272 aa18.68■□□□□ 0.58
LMX1B-204ENST00000561065 TLK2Q86UE8 772 aa18.68■□□□□ 0.58
LMX1B-204ENST00000561065 FAAP100Q0VG06 881 aa18.67■□□□□ 0.58
LMX1B-204ENST00000561065 GNASQ5JWF2 1037 aa18.67■□□□□ 0.58
LMX1B-204ENST00000561065 C9orf50Q5SZB4 431 aa18.67■□□□□ 0.58
LMX1B-204ENST00000561065 RNF207Q6ZRF8 634 aa18.67■□□□□ 0.58
LMX1B-204ENST00000561065 ADGRF4Q8IZF3 695 aa18.67■□□□□ 0.58
LMX1B-204ENST00000561065 STAG2Q8N3U4 1231 aa18.67■□□□□ 0.58
LMX1B-204ENST00000561065 NUP133Q8WUM0 1156 aa18.67■□□□□ 0.58
LMX1B-204ENST00000561065 UBAC1Q9BSL1 405 aa18.67■□□□□ 0.58
LMX1B-204ENST00000561065 SENP2Q9HC62 589 aa18.67■□□□□ 0.58
LMX1B-204ENST00000561065 VTA1Q9NP79 307 aa18.67■□□□□ 0.58
LMX1B-204ENST00000561065 CDH23Q9H251 3354 aa18.67■□□□□ 0.58
LMX1B-204ENST00000561065 KIAA1217Q5T5P2 1943 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms