RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 PLA2G6O60733 806 aa22.1■■□□□ 1.13
TPM1-226ENST00000560959 CCL23P55773 120 aa22.1■■□□□ 1.13
TPM1-226ENST00000560959 PPP2R2DQ66LE6 453 aa22.1■■□□□ 1.13
TPM1-226ENST00000560959 SLFN13Q68D06 897 aa22.1■■□□□ 1.13
TPM1-226ENST00000560959 FAM160B2Q86V87 743 aa22.1■■□□□ 1.13
TPM1-226ENST00000560959 FAM122AQ96E09 287 aa22.1■■□□□ 1.13
TPM1-226ENST00000560959 COG6Q9Y2V7 657 aa22.1■■□□□ 1.13
TPM1-226ENST00000560959 ARIH1Q9Y4X5 557 aaPredicted RBP22.1■■□□□ 1.13
TPM1-226ENST00000560959 DYNC1LI2O43237 492 aaPredicted RBP22.09■■□□□ 1.13
TPM1-226ENST00000560959 B4GALT4O60513 344 aa22.09■■□□□ 1.13
TPM1-226ENST00000560959 SUPT20HL2P0C7V6 817 aa22.09■■□□□ 1.13
TPM1-226ENST00000560959 SMPD1P17405 629 aa22.09■■□□□ 1.13
TPM1-226ENST00000560959 STAT2P52630 851 aa22.09■■□□□ 1.13
TPM1-226ENST00000560959 APPBP2Q92624 585 aa22.09■■□□□ 1.13
TPM1-226ENST00000560959 OSBP2Q969R2 916 aa22.09■■□□□ 1.13
TPM1-226ENST00000560959 AGBL1Q96MI9 1066 aa22.09■■□□□ 1.13
TPM1-226ENST00000560959 BCL11AQ9H165 835 aa22.09■■□□□ 1.13
TPM1-226ENST00000560959 TRPV6Q9H1D0 765 aa22.09■■□□□ 1.13
TPM1-226ENST00000560959 WNT8AQ9H1J5 351 aa22.09■■□□□ 1.13
TPM1-226ENST00000560959 HOMER2Q9NSB8 354 aa22.09■■□□□ 1.13
TPM1-226ENST00000560959 ZNF536O15090 1300 aa22.08■■□□□ 1.13
TPM1-226ENST00000560959 TMEM232C9JQI7 657 aa22.08■■□□□ 1.13
TPM1-226ENST00000560959 ERC2O15083 957 aa22.08■■□□□ 1.13
TPM1-226ENST00000560959 RABGGTBP53611 331 aa22.08■■□□□ 1.13
TPM1-226ENST00000560959 TAPT1Q6NXT6 567 aa22.08■■□□□ 1.13
TPM1-226ENST00000560959 STK11IPQ8N1F8 1099 aa22.08■■□□□ 1.13
TPM1-226ENST00000560959 KBTBD3Q8NAB2 608 aa22.08■■□□□ 1.13
TPM1-226ENST00000560959 NEDD1Q8NHV4 660 aa22.08■■□□□ 1.13
TPM1-226ENST00000560959 STAG1Q8WVM7 1258 aa22.08■■□□□ 1.13
TPM1-226ENST00000560959 VWCEQ96DN2 955 aa22.08■■□□□ 1.13
TPM1-226ENST00000560959 GMCL1Q96IK5 515 aa22.08■■□□□ 1.13
TPM1-226ENST00000560959 LRRCC1Q9C099 1032 aa22.08■■□□□ 1.13
TPM1-226ENST00000560959 RNF146Q9NTX7 359 aa22.08■■□□□ 1.13
TPM1-226ENST00000560959 PLIN4Q96Q06 1357 aa22.08■■□□□ 1.12
TPM1-226ENST00000560959 ZFYP08048 801 aaPredicted RBP22.07■■□□□ 1.12
TPM1-226ENST00000560959 ATP2A2P16615 1042 aaKnown RBP22.07■■□□□ 1.12
TPM1-226ENST00000560959 PPP4R3BQ5MIZ7 849 aa22.07■■□□□ 1.12
TPM1-226ENST00000560959 MORC4Q8TE76 937 aa22.07■■□□□ 1.12
TPM1-226ENST00000560959 TRERF1Q96PN7 1200 aa22.07■■□□□ 1.12
TPM1-226ENST00000560959 ALDH8A1Q9H2A2 487 aaPredicted RBP22.07■■□□□ 1.12
TPM1-226ENST00000560959 ECHDC1Q9NTX5 307 aa22.07■■□□□ 1.12
TPM1-226ENST00000560959 PATL2C9JE40 543 aaKnown RBP22.06■■□□□ 1.12
TPM1-226ENST00000560959 LRRC47Q8N1G4 583 aaKnown RBP22.06■■□□□ 1.12
TPM1-226ENST00000560959 EPB41L4AQ9HCS5 686 aaPredicted RBP22.06■■□□□ 1.12
TPM1-226ENST00000560959 VTA1Q9NP79 307 aa22.06■■□□□ 1.12
TPM1-226ENST00000560959 MCM3APO60318 1980 aa22.06■■□□□ 1.12
TPM1-226ENST00000560959 RNF113AO15541 343 aaKnown RBP22.05■■□□□ 1.12
TPM1-226ENST00000560959 PRDM1O75626 825 aa22.05■■□□□ 1.12
TPM1-226ENST00000560959 TSPY3P0CV98 308 aa22.05■■□□□ 1.12
TPM1-226ENST00000560959 TSPY8P0CW00 308 aa22.05■■□□□ 1.12
TPM1-226ENST00000560959 SLC1A4P43007 532 aa22.05■■□□□ 1.12
TPM1-226ENST00000560959 TDO2P48775 406 aa22.05■■□□□ 1.12
TPM1-226ENST00000560959 HNRNPUQ00839 825 aaKnown RBP eCLIP22.05■■□□□ 1.12
TPM1-226ENST00000560959 PDE4BQ07343 736 aa22.05■■□□□ 1.12
TPM1-226ENST00000560959 TMEM67Q5HYA8 995 aa22.05■■□□□ 1.12
TPM1-226ENST00000560959 PHOSPHO2Q8TCD6 241 aa22.05■■□□□ 1.12
TPM1-226ENST00000560959 PDGFCQ9NRA1 345 aa22.05■■□□□ 1.12
TPM1-226ENST00000560959 CYP39A1Q9NYL5 469 aa22.05■■□□□ 1.12
TPM1-226ENST00000560959 COG5Q9UP83 839 aa22.05■■□□□ 1.12
TPM1-226ENST00000560959 MYH7P12883 1935 aa22.04■■□□□ 1.12
TPM1-226ENST00000560959 REV3LO60673 3130 aa22.04■■□□□ 1.12
TPM1-226ENST00000560959 LOC102724159A0A0B4J2E5 919 aa22.04■■□□□ 1.12
TPM1-226ENST00000560959 ZBBXA8MT70 800 aa22.04■■□□□ 1.12
TPM1-226ENST00000560959 GPAA1O43292 621 aa22.04■■□□□ 1.12
TPM1-226ENST00000560959 GTPBP6O43824 516 aaPredicted RBP22.04■■□□□ 1.12
TPM1-226ENST00000560959 MYOGP15173 224 aa22.04■■□□□ 1.12
TPM1-226ENST00000560959 PWP2Q15269 919 aaKnown RBP22.04■■□□□ 1.12
TPM1-226ENST00000560959 DUSP28Q4G0W2 176 aa22.04■■□□□ 1.12
TPM1-226ENST00000560959 POLR3EQ9NVU0 708 aa22.04■■□□□ 1.12
TPM1-226ENST00000560959 MTCH2Q9Y6C9 303 aa22.04■■□□□ 1.12
TPM1-226ENST00000560959 APPP05067 770 aa22.03■■□□□ 1.12
TPM1-226ENST00000560959 RFC2P35250 354 aa22.03■■□□□ 1.12
TPM1-226ENST00000560959 PSMC6P62333 389 aa22.03■■□□□ 1.12
TPM1-226ENST00000560959 TFF2Q03403 129 aa22.03■■□□□ 1.12
TPM1-226ENST00000560959 IFNL3Q8IZI9 196 aa22.03■■□□□ 1.12
TPM1-226ENST00000560959 SCLYQ96I15 445 aa22.03■■□□□ 1.12
TPM1-226ENST00000560959 TRANK1O15050 2925 aa22.02■■□□□ 1.12
TPM1-226ENST00000560959 SLC3A2P08195 630 aaKnown RBP22.02■■□□□ 1.12
TPM1-226ENST00000560959 ACTN1P12814 892 aa22.02■■□□□ 1.12
TPM1-226ENST00000560959 ALAS1P13196 640 aa22.02■■□□□ 1.12
TPM1-226ENST00000560959 HOXD11P31277 338 aaPredicted RBP22.02■■□□□ 1.12
TPM1-226ENST00000560959 TTLL4Q14679 1199 aa22.02■■□□□ 1.12
TPM1-226ENST00000560959 LRRFIP1Q32MZ4 808 aaKnown RBP22.02■■□□□ 1.12
TPM1-226ENST00000560959 RCSD1Q6JBY9 416 aa22.02■■□□□ 1.12
TPM1-226ENST00000560959 KIAA1211Q6ZU35 1233 aa22.02■■□□□ 1.12
TPM1-226ENST00000560959 NECAB3Q96P71 396 aaPredicted RBP22.02■■□□□ 1.12
TPM1-226ENST00000560959 NACAP1Q9BZK3 213 aa22.02■■□□□ 1.12
TPM1-226ENST00000560959 MYH4Q9Y623 1939 aa22.02■■□□□ 1.11
TPM1-226ENST00000560959 MCCP23508 829 aa22.01■■□□□ 1.11
TPM1-226ENST00000560959 TFAP4Q01664 338 aa22.01■■□□□ 1.11
TPM1-226ENST00000560959 IKQ13123 557 aaPredicted RBP22.01■■□□□ 1.11
TPM1-226ENST00000560959 FBXO16Q8IX29 292 aaPredicted RBP22.01■■□□□ 1.11
TPM1-226ENST00000560959 MICALL1Q8N3F8 863 aa22.01■■□□□ 1.11
TPM1-226ENST00000560959 SLC9A7Q96T83 725 aa22.01■■□□□ 1.11
TPM1-226ENST00000560959 TNKSO95271 1327 aa22.01■■□□□ 1.11
TPM1-226ENST00000560959 RBM47A0AV96 593 aaKnown RBP22■■□□□ 1.11
TPM1-226ENST00000560959 CA3P07451 260 aa22■■□□□ 1.11
TPM1-226ENST00000560959 CPT1AP50416 773 aa22■■□□□ 1.11
TPM1-226ENST00000560959 PURAQ00577 322 aaKnown RBP22■■□□□ 1.11
TPM1-226ENST00000560959 SKIV2LQ15477 1246 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms