RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 RLFQ13129 1914 aa8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 A0A0G2JLL6 359 aaPredicted RBP8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 SMCO2A6NFE2 343 aa8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 DDX11L8A8MPP1 907 aa8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 NCLP19338 710 aaKnown RBP8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 GNA11P29992 359 aa8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 KRT85P78386 507 aa8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 NOM1Q5C9Z4 860 aaKnown RBP8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 EARS2Q5JPH6 523 aaKnown RBP8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 PPP1R18Q6NYC8 613 aa8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 CATSPERGQ6ZRH7 1159 aa8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 PRRT2Q7Z6L0 340 aaPredicted RBP8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 FBXO11Q86XK2 927 aa8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 C2orf69Q8N8R5 385 aa8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 TMEM87AQ8NBN3 555 aa8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 OPTNQ96CV9 577 aa8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 USP28Q96RU2 1077 aa8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 SLF1Q9BQI6 1058 aa8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 AMNQ9BXJ7 453 aa8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 TANGO6Q9C0B7 1094 aa8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 GPBP1L1Q9HC44 474 aaPredicted RBP8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 GDPD2Q9HCC8 539 aa8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 C6orf50Q9HD87 102 aa8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 LMBRD1Q9NUN5 540 aa8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 PPP1R9AQ9ULJ8 1098 aa8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 PCDHA1Q9Y5I3 950 aa8.31□□□□□ -1.08
HMBOX1-214ENST00000560357 LOC285556D6RIA3 1793 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 FAM205CA6NFA0 338 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 USP17L15C9J2P7 530 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 USP17L13C9JLJ4 530 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 USP17L11C9JVI0 530 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 USP17L18D6R9N7 530 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 USP17L22D6RA61 530 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 USP17L17D6RBQ6 530 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 USP17L19D6RCP7 530 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 USP17L20D6RJB6 530 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 GOLGA6L22H0YM25 854 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 KIF3CO14782 793 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 PRPF40AO75400 957 aaKnown RBP8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 FLOT1O75955 427 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 FDX1P10109 184 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 GJA5P36382 358 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 TOB1P50616 345 aaPredicted RBP8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 ADCY7P51828 1080 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 USP17L24Q0WX57 530 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 TRAF1Q13077 416 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 MOGSQ13724 837 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 COG2Q14746 738 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 PROCA1Q8NCQ7 364 aaPredicted RBP8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 RASGRP4Q8TDF6 673 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 LEO1Q8WVC0 666 aaPredicted RBP8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 FTOQ9C0B1 505 aaKnown RBP eCLIP8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 SLC38A10Q9HBR0 1119 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 RIC8AQ9NPQ8 531 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 RTEL1Q9NZ71 1219 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 RCOR1Q9UKL0 485 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 CFAP45Q9UL16 551 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 PCDHA6Q9UN73 950 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 ADAMTS5Q9UNA0 930 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 PCDHA8Q9Y5H6 950 aa8.3□□□□□ -1.08
HMBOX1-214ENST00000560357 ZNF536O15090 1300 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 OPLAHO14841 1288 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 FIBPO43427 364 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 ZBED4O75132 1171 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 ICAM1P05362 532 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 TAL1P17542 331 aaPredicted RBP8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 HOXA7P31268 230 aaPredicted RBP8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 NASPP49321 788 aaPredicted RBP8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 CLK2P49760 499 aaKnown RBP8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 MRPL12P52815 198 aaKnown RBP8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 CEBPZQ03701 1054 aaKnown RBP8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 SNAPC2Q13487 334 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 USH1GQ495M9 461 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 RILPL1Q5EBL4 403 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 TREML2Q5T2D2 321 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 ANO1Q5XXA6 986 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 CCDC174Q6PII3 467 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 GADL1Q6ZQY3 521 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 PIK3AP1Q6ZUJ8 805 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 EFCAB3Q8N7B9 438 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 REPS2Q8NFH8 660 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 BICD2Q8TD16 824 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 CUL5Q93034 780 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 ATG4CQ96DT6 458 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 SPATA32Q96LK8 384 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 SCAND2PQ9GZW5 306 aaPredicted RBP8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 PSTPIP2Q9H939 334 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 PLSCR2Q9NRY7 297 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 POLR3EQ9NVU0 708 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 HOXC10Q9NYD6 342 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 BIN2Q9UBW5 565 aaPredicted RBP8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 BOLA1Q9Y3E2 137 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 CLIC4Q9Y696 253 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 ELP1O95163 1332 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 MYPNQ86TC9 1320 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 PASKQ96RG2 1323 aa8.29□□□□□ -1.08
HMBOX1-214ENST00000560357 VWA5AO00534 786 aa8.28□□□□□ -1.08
HMBOX1-214ENST00000560357 MEIS2O14770 477 aa8.28□□□□□ -1.08
HMBOX1-214ENST00000560357 GADD45BO75293 160 aaPredicted RBP8.28□□□□□ -1.08
HMBOX1-214ENST00000560357 YEATS4O95619 227 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms