RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 MEIS3Q99687 375 aa12.46□□□□□ -0.41
APH1B-208ENST00000560353 ALDH8A1Q9H2A2 487 aaPredicted RBP12.46□□□□□ -0.41
APH1B-208ENST00000560353 GPR108Q9NPR9 543 aa12.46□□□□□ -0.41
APH1B-208ENST00000560353 MCM9Q9NXL9 1143 aa12.46□□□□□ -0.41
APH1B-208ENST00000560353 PRKAG3Q9UGI9 489 aa12.46□□□□□ -0.41
APH1B-208ENST00000560353 C5orf42Q9H799 3197 aa12.45□□□□□ -0.42
APH1B-208ENST00000560353 BAIAP3O94812 1187 aa12.45□□□□□ -0.42
APH1B-208ENST00000560353 GNAI3P08754 354 aa12.45□□□□□ -0.42
APH1B-208ENST00000560353 CLEC10AQ8IUN9 316 aa12.45□□□□□ -0.42
APH1B-208ENST00000560353 CCDC144CPQ8IYA2 1237 aa12.45□□□□□ -0.42
APH1B-208ENST00000560353 ANKRD35Q8N283 1001 aa12.45□□□□□ -0.42
APH1B-208ENST00000560353 EFCAB3Q8N7B9 438 aa12.45□□□□□ -0.42
APH1B-208ENST00000560353 GDPD5Q8WTR4 605 aa12.45□□□□□ -0.42
APH1B-208ENST00000560353 DBNDD2Q9BQY9 259 aa12.45□□□□□ -0.42
APH1B-208ENST00000560353 FTOQ9C0B1 505 aaKnown RBP eCLIP12.45□□□□□ -0.42
APH1B-208ENST00000560353 KATNBL1Q9H079 304 aa12.45□□□□□ -0.42
APH1B-208ENST00000560353 SUGCTQ9HAC7 445 aa12.45□□□□□ -0.42
APH1B-208ENST00000560353 GOPCQ9HD26 462 aa12.45□□□□□ -0.42
APH1B-208ENST00000560353 RIPK3Q9Y572 518 aa12.45□□□□□ -0.42
APH1B-208ENST00000560353 ZNF318Q5VUA4 2279 aa12.45□□□□□ -0.42
APH1B-208ENST00000560353 ASTN1O14525 1302 aa12.44□□□□□ -0.42
APH1B-208ENST00000560353 CYP2C9P11712 490 aa12.44□□□□□ -0.42
APH1B-208ENST00000560353 KCNJ6P48051 423 aa12.44□□□□□ -0.42
APH1B-208ENST00000560353 PSMC6P62333 389 aa12.44□□□□□ -0.42
APH1B-208ENST00000560353 PKN1Q16512 942 aa12.44□□□□□ -0.42
APH1B-208ENST00000560353 TNNI3KQ59H18 835 aa12.44□□□□□ -0.42
APH1B-208ENST00000560353 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.44□□□□□ -0.42
APH1B-208ENST00000560353 SPRED2Q7Z698 418 aa12.44□□□□□ -0.42
APH1B-208ENST00000560353 TLK2Q86UE8 772 aa12.44□□□□□ -0.42
APH1B-208ENST00000560353 RETREG2Q8NC44 543 aa12.44□□□□□ -0.42
APH1B-208ENST00000560353 NEK9Q8TD19 979 aa12.44□□□□□ -0.42
APH1B-208ENST00000560353 ANKS1AQ92625 1134 aa12.44□□□□□ -0.42
APH1B-208ENST00000560353 CCDC17Q96LX7 622 aa12.44□□□□□ -0.42
APH1B-208ENST00000560353 ZBED2Q9BTP6 218 aa12.44□□□□□ -0.42
APH1B-208ENST00000560353 CRNKL1Q9BZJ0 848 aaKnown RBP12.44□□□□□ -0.42
APH1B-208ENST00000560353 SMC4Q9NTJ3 1288 aa12.44□□□□□ -0.42
APH1B-208ENST00000560353 TRMT13Q9NUP7 481 aaKnown RBP12.44□□□□□ -0.42
APH1B-208ENST00000560353 FBXO40Q9UH90 709 aa12.44□□□□□ -0.42
APH1B-208ENST00000560353 GNEQ9Y223 722 aaKnown RBP12.44□□□□□ -0.42
APH1B-208ENST00000560353 FPGT-TNNI3KV9GXZ4 949 aa12.44□□□□□ -0.42
APH1B-208ENST00000560353 TNKSO95271 1327 aa12.43□□□□□ -0.42
APH1B-208ENST00000560353 LCHNA4D1U4 455 aa12.43□□□□□ -0.42
APH1B-208ENST00000560353 ATP2A1O14983 1001 aa12.43□□□□□ -0.42
APH1B-208ENST00000560353 DYNC1LI2O43237 492 aaPredicted RBP12.43□□□□□ -0.42
APH1B-208ENST00000560353 GFRA3O60609 400 aa12.43□□□□□ -0.42
APH1B-208ENST00000560353 EEF2P13639 858 aaKnown RBP12.43□□□□□ -0.42
APH1B-208ENST00000560353 AKR1B1P15121 316 aa12.43□□□□□ -0.42
APH1B-208ENST00000560353 SLC4A3P48751 1232 aa12.43□□□□□ -0.42
APH1B-208ENST00000560353 ERVK-21P61565 698 aa12.43□□□□□ -0.42
APH1B-208ENST00000560353 ZP2Q05996 745 aa12.43□□□□□ -0.42
APH1B-208ENST00000560353 FAM83BQ5T0W9 1011 aa12.43□□□□□ -0.42
APH1B-208ENST00000560353 PRSS33Q8NF86 280 aa12.43□□□□□ -0.42
APH1B-208ENST00000560353 FGD4Q96M96 766 aa12.43□□□□□ -0.42
APH1B-208ENST00000560353 TGS1Q96RS0 853 aaKnown RBP12.43□□□□□ -0.42
APH1B-208ENST00000560353 SLF1Q9BQI6 1058 aa12.43□□□□□ -0.42
APH1B-208ENST00000560353 RIOK1Q9BRS2 568 aaKnown RBP12.43□□□□□ -0.42
APH1B-208ENST00000560353 API5Q9BZZ5 524 aaKnown RBP12.43□□□□□ -0.42
APH1B-208ENST00000560353 KANSL2Q9H9L4 492 aa12.43□□□□□ -0.42
APH1B-208ENST00000560353 MRS2Q9HD23 443 aa12.43□□□□□ -0.42
APH1B-208ENST00000560353 Q9Y3F1 56 aa12.43□□□□□ -0.42
APH1B-208ENST00000560353 MAGEB6P1A0A0J9YX57 407 aa12.42□□□□□ -0.42
APH1B-208ENST00000560353 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.42□□□□□ -0.42
APH1B-208ENST00000560353 RAD21O60216 631 aa12.42□□□□□ -0.42
APH1B-208ENST00000560353 ZBED4O75132 1171 aa12.42□□□□□ -0.42
APH1B-208ENST00000560353 IQCF3P0C7M6 154 aa12.42□□□□□ -0.42
APH1B-208ENST00000560353 IQSEC1Q6DN90 963 aa12.42□□□□□ -0.42
APH1B-208ENST00000560353 ADHFE1Q8IWW8 467 aa12.42□□□□□ -0.42
APH1B-208ENST00000560353 PRPF38AQ8NAV1 312 aaKnown RBP12.42□□□□□ -0.42
APH1B-208ENST00000560353 RAD9AQ99638 391 aa12.42□□□□□ -0.42
APH1B-208ENST00000560353 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.42□□□□□ -0.42
APH1B-208ENST00000560353 CTNNA3Q9UI47 895 aa12.42□□□□□ -0.42
APH1B-208ENST00000560353 MTUS1Q9ULD2 1270 aa12.42□□□□□ -0.42
APH1B-208ENST00000560353 CTDP1Q9Y5B0 961 aaPredicted RBP12.42□□□□□ -0.42
APH1B-208ENST00000560353 COL11A1P12107 1806 aaPredicted RBP12.41□□□□□ -0.42
APH1B-208ENST00000560353 H3BQ06 376 aaPredicted RBP12.41□□□□□ -0.42
APH1B-208ENST00000560353 SMPD1P17405 629 aa12.41□□□□□ -0.42
APH1B-208ENST00000560353 BMP8AQ7Z5Y6 402 aa12.41□□□□□ -0.42
APH1B-208ENST00000560353 CPXCR1Q8N123 301 aa12.41□□□□□ -0.42
APH1B-208ENST00000560353 CHST13Q8NET6 341 aa12.41□□□□□ -0.42
APH1B-208ENST00000560353 NOB1Q9ULX3 412 aaKnown RBP12.41□□□□□ -0.42
APH1B-208ENST00000560353 PARP14Q460N5 1801 aa12.41□□□□□ -0.42
APH1B-208ENST00000560353 ASB14A6NK59 587 aa12.4□□□□□ -0.42
APH1B-208ENST00000560353 CYP2D6P10635 497 aa12.4□□□□□ -0.42
APH1B-208ENST00000560353 BFSP2Q13515 415 aa12.4□□□□□ -0.42
APH1B-208ENST00000560353 HERC4Q5GLZ8 1057 aaPredicted RBP12.4□□□□□ -0.42
APH1B-208ENST00000560353 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.4□□□□□ -0.42
APH1B-208ENST00000560353 DYNLL2Q96FJ2 89 aa12.4□□□□□ -0.42
APH1B-208ENST00000560353 IRF2BPLQ9H1B7 796 aa12.4□□□□□ -0.42
APH1B-208ENST00000560353 DCP1AQ9NPI6 582 aaPredicted RBP12.4□□□□□ -0.42
APH1B-208ENST00000560353 POLR3EQ9NVU0 708 aa12.4□□□□□ -0.42
APH1B-208ENST00000560353 COL4A4P53420 1690 aaPredicted RBP12.39□□□□□ -0.43
APH1B-208ENST00000560353 USP17L12C9JPN9 530 aa12.39□□□□□ -0.43
APH1B-208ENST00000560353 USP17L21D6R901 530 aa12.39□□□□□ -0.43
APH1B-208ENST00000560353 IRS1P35568 1242 aa12.39□□□□□ -0.43
APH1B-208ENST00000560353 WDR5P61964 334 aaKnown RBP12.39□□□□□ -0.43
APH1B-208ENST00000560353 CNTN2Q02246 1040 aa12.39□□□□□ -0.43
APH1B-208ENST00000560353 OS9Q13438 667 aaPredicted RBP12.39□□□□□ -0.43
APH1B-208ENST00000560353 PTPROQ16827 1216 aa12.39□□□□□ -0.43
APH1B-208ENST00000560353 LRRFIP1Q32MZ4 808 aaKnown RBP12.39□□□□□ -0.43
APH1B-208ENST00000560353 ERMP1Q7Z2K6 904 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms