RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 PFKFB3Q16875 520 aaPredicted RBP14.16□□□□□ -0.14
USP8-209ENST00000560297 USH1GQ495M9 461 aa14.16□□□□□ -0.14
USP8-209ENST00000560297 ABRAQ8N0Z2 381 aa14.16□□□□□ -0.14
USP8-209ENST00000560297 SAMD3Q8N6K7 520 aa14.16□□□□□ -0.14
USP8-209ENST00000560297 RGS22Q8NE09 1264 aa14.16□□□□□ -0.14
USP8-209ENST00000560297 ZNF296Q8WUU4 475 aaPredicted RBP14.16□□□□□ -0.14
USP8-209ENST00000560297 PORCNQ9H237 461 aa14.16□□□□□ -0.14
USP8-209ENST00000560297 RIPK3Q9Y572 518 aa14.16□□□□□ -0.14
USP8-209ENST00000560297 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.16□□□□□ -0.14
USP8-209ENST00000560297 IVNS1ABPQ9Y6Y0 642 aa14.16□□□□□ -0.14
USP8-209ENST00000560297 STK36Q9NRP7 1315 aa14.15□□□□□ -0.14
USP8-209ENST00000560297 hCG_1642624A0A1W2PR95 340 aa14.15□□□□□ -0.14
USP8-209ENST00000560297 FOXN1O15353 648 aa14.15□□□□□ -0.14
USP8-209ENST00000560297 PPP1R11O60927 126 aaPredicted RBP14.15□□□□□ -0.14
USP8-209ENST00000560297 FCER1AP12319 257 aa14.15□□□□□ -0.14
USP8-209ENST00000560297 PSMC4P43686 418 aa14.15□□□□□ -0.14
USP8-209ENST00000560297 CUL4AQ13619 759 aa14.15□□□□□ -0.14
USP8-209ENST00000560297 PKN1Q16512 942 aa14.15□□□□□ -0.14
USP8-209ENST00000560297 WDR78Q5VTH9 848 aa14.15□□□□□ -0.14
USP8-209ENST00000560297 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.15□□□□□ -0.14
USP8-209ENST00000560297 PLEKHH3Q7Z736 793 aa14.15□□□□□ -0.14
USP8-209ENST00000560297 MCF2L2Q86YR7 1114 aa14.15□□□□□ -0.14
USP8-209ENST00000560297 TEX2Q8IWB9 1127 aa14.15□□□□□ -0.14
USP8-209ENST00000560297 FAM177A1Q8N128 213 aaPredicted RBP14.15□□□□□ -0.14
USP8-209ENST00000560297 NSUN7Q8NE18 718 aaKnown RBP14.15□□□□□ -0.14
USP8-209ENST00000560297 CCDC12Q8WUD4 166 aaPredicted RBP14.15□□□□□ -0.14
USP8-209ENST00000560297 COA7Q96BR5 231 aa14.15□□□□□ -0.14
USP8-209ENST00000560297 ACAD9Q9H845 621 aa14.15□□□□□ -0.14
USP8-209ENST00000560297 EFCC1Q9HA90 598 aa14.15□□□□□ -0.14
USP8-209ENST00000560297 SH3GLB2Q9NR46 395 aa14.15□□□□□ -0.14
USP8-209ENST00000560297 HOMER2Q9NSB8 354 aa14.15□□□□□ -0.14
USP8-209ENST00000560297 RNF146Q9NTX7 359 aa14.15□□□□□ -0.14
USP8-209ENST00000560297 BARHL2Q9NY43 387 aa14.15□□□□□ -0.14
USP8-209ENST00000560297 MAP3K20Q9NYL2 800 aaKnown RBP14.15□□□□□ -0.14
USP8-209ENST00000560297 ORC3Q9UBD5 711 aaPredicted RBP14.15□□□□□ -0.14
USP8-209ENST00000560297 TSKSQ9UJT2 592 aa14.15□□□□□ -0.14
USP8-209ENST00000560297 RLFQ13129 1914 aa14.15□□□□□ -0.14
USP8-209ENST00000560297 PTPDC1A2A3K4 754 aa14.14□□□□□ -0.15
USP8-209ENST00000560297 SLC15A5A6NIM6 579 aa14.14□□□□□ -0.15
USP8-209ENST00000560297 TNPO2O14787 897 aaKnown RBP14.14□□□□□ -0.15
USP8-209ENST00000560297 HSPA8P11142 646 aaKnown RBP14.14□□□□□ -0.15
USP8-209ENST00000560297 XBP1P17861 261 aa14.14□□□□□ -0.15
USP8-209ENST00000560297 ST3GAL1Q11201 340 aa14.14□□□□□ -0.15
USP8-209ENST00000560297 KCTD2Q14681 263 aa14.14□□□□□ -0.15
USP8-209ENST00000560297 HEATR3Q7Z4Q2 680 aa14.14□□□□□ -0.15
USP8-209ENST00000560297 GPR142Q7Z601 462 aa14.14□□□□□ -0.15
USP8-209ENST00000560297 SMARCC2Q8TAQ2 1214 aa14.14□□□□□ -0.15
USP8-209ENST00000560297 CLEC4DQ8WXI8 215 aa14.14□□□□□ -0.15
USP8-209ENST00000560297 INTS4Q96HW7 963 aaKnown RBP14.14□□□□□ -0.15
USP8-209ENST00000560297 GLT8D2Q9H1C3 349 aa14.14□□□□□ -0.15
USP8-209ENST00000560297 KIF3AQ9Y496 699 aa14.14□□□□□ -0.15
USP8-209ENST00000560297 PPFIA3O75145 1194 aa14.13□□□□□ -0.15
USP8-209ENST00000560297 PTPREP23469 700 aa14.13□□□□□ -0.15
USP8-209ENST00000560297 BECN1Q14457 450 aa14.13□□□□□ -0.15
USP8-209ENST00000560297 MUM1L1Q5H9M0 696 aa14.13□□□□□ -0.15
USP8-209ENST00000560297 WWC2Q6AWC2 1192 aa14.13□□□□□ -0.15
USP8-209ENST00000560297 PPP1R18Q6NYC8 613 aa14.13□□□□□ -0.15
USP8-209ENST00000560297 ANKRD35Q8N283 1001 aa14.13□□□□□ -0.15
USP8-209ENST00000560297 CD99L2Q8TCZ2 262 aa14.13□□□□□ -0.15
USP8-209ENST00000560297 DDX11Q96FC9 970 aa14.13□□□□□ -0.15
USP8-209ENST00000560297 TRIM47Q96LD4 638 aa14.13□□□□□ -0.15
USP8-209ENST00000560297 MMP19Q99542 508 aa14.13□□□□□ -0.15
USP8-209ENST00000560297 SLC5A4Q9NY91 659 aa14.13□□□□□ -0.15
USP8-209ENST00000560297 PFASO15067 1338 aa14.13□□□□□ -0.15
USP8-209ENST00000560297 STXBP3O00186 592 aa14.12□□□□□ -0.15
USP8-209ENST00000560297 JAK2O60674 1132 aa14.12□□□□□ -0.15
USP8-209ENST00000560297 FDPSP14324 419 aaKnown RBP14.12□□□□□ -0.15
USP8-209ENST00000560297 MRPL12P52815 198 aaKnown RBP14.12□□□□□ -0.15
USP8-209ENST00000560297 LBX1P52954 281 aa14.12□□□□□ -0.15
USP8-209ENST00000560297 NAPAP54920 295 aa14.12□□□□□ -0.15
USP8-209ENST00000560297 PRMT2P55345 433 aa14.12□□□□□ -0.15
USP8-209ENST00000560297 FAM184AQ8NB25 1140 aa14.12□□□□□ -0.15
USP8-209ENST00000560297 CCDC148Q8NFR7 591 aa14.12□□□□□ -0.15
USP8-209ENST00000560297 SOCS4Q8WXH5 440 aa14.12□□□□□ -0.15
USP8-209ENST00000560297 GPKOWQ92917 476 aaPredicted RBP eCLIP14.12□□□□□ -0.15
USP8-209ENST00000560297 NUDT12Q9BQG2 462 aa14.12□□□□□ -0.15
USP8-209ENST00000560297 PSTPIP2Q9H939 334 aa14.12□□□□□ -0.15
USP8-209ENST00000560297 ESYT2A0FGR8 921 aa14.11□□□□□ -0.15
USP8-209ENST00000560297 GCOM1H8Y6P7 765 aaPredicted RBP14.11□□□□□ -0.15
USP8-209ENST00000560297 NFIBO00712 420 aa14.11□□□□□ -0.15
USP8-209ENST00000560297 POLR2MP0CAP2 368 aa14.11□□□□□ -0.15
USP8-209ENST00000560297 CTGFP29279 349 aa14.11□□□□□ -0.15
USP8-209ENST00000560297 GNA11P29992 359 aa14.11□□□□□ -0.15
USP8-209ENST00000560297 GHRHRQ02643 423 aa14.11□□□□□ -0.15
USP8-209ENST00000560297 GRB14Q14449 540 aa14.11□□□□□ -0.15
USP8-209ENST00000560297 MORN1Q5T089 497 aa14.11□□□□□ -0.15
USP8-209ENST00000560297 GALNT17Q6IS24 598 aa14.11□□□□□ -0.15
USP8-209ENST00000560297 NSMFQ6X4W1 530 aa14.11□□□□□ -0.15
USP8-209ENST00000560297 RNF207Q6ZRF8 634 aa14.11□□□□□ -0.15
USP8-209ENST00000560297 DPP9Q86TI2 863 aa14.11□□□□□ -0.15
USP8-209ENST00000560297 CUL5Q93034 780 aa14.11□□□□□ -0.15
USP8-209ENST00000560297 ALG1Q9BT22 464 aa14.11□□□□□ -0.15
USP8-209ENST00000560297 ARHGAP39Q9C0H5 1083 aa14.11□□□□□ -0.15
USP8-209ENST00000560297 ZMYND12Q9H0C1 365 aa14.11□□□□□ -0.15
USP8-209ENST00000560297 C6orf50Q9HD87 102 aa14.11□□□□□ -0.15
USP8-209ENST00000560297 A1CFQ9NQ94 594 aaKnown RBP14.11□□□□□ -0.15
USP8-209ENST00000560297 CYP39A1Q9NYL5 469 aa14.11□□□□□ -0.15
USP8-209ENST00000560297 BAZ2BQ9UIF8 2168 aaKnown RBP14.11□□□□□ -0.15
USP8-209ENST00000560297 GJD2Q9UKL4 321 aa14.11□□□□□ -0.15
USP8-209ENST00000560297 SMC3Q9UQE7 1217 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms