RNA–Protein interactions for RNA: ENST00000560047.1

CRTC3-207, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-207ENST00000560047 CHMP4BP1P59074 171 aa9.9□□□□□ -0.82
CRTC3-207ENST00000560047 DDX10Q13206 875 aaKnown RBP9.9□□□□□ -0.82
CRTC3-207ENST00000560047 NKPD1Q17RQ9 610 aa9.9□□□□□ -0.82
CRTC3-207ENST00000560047 FBXW10Q5XX13 1052 aa9.9□□□□□ -0.82
CRTC3-207ENST00000560047 NLRC3Q7RTR2 1065 aa9.9□□□□□ -0.82
CRTC3-207ENST00000560047 NBPF11Q86T75 865 aa9.9□□□□□ -0.82
CRTC3-207ENST00000560047 VSIG10LQ86VR7 867 aa9.9□□□□□ -0.82
CRTC3-207ENST00000560047 MFSD4AQ8N468 514 aa9.9□□□□□ -0.82
CRTC3-207ENST00000560047 ANTXR1Q9H6X2 564 aa9.9□□□□□ -0.82
CRTC3-207ENST00000560047 IGSF5Q9NSI5 407 aa9.9□□□□□ -0.82
CRTC3-207ENST00000560047 CD163L1Q9NR16 1453 aa9.9□□□□□ -0.83
CRTC3-207ENST00000560047 POLR3AO14802 1390 aaPredicted RBP9.89□□□□□ -0.83
CRTC3-207ENST00000560047 MEIS3P2A8K0S8 358 aa9.89□□□□□ -0.83
CRTC3-207ENST00000560047 SOX9P48436 509 aa9.89□□□□□ -0.83
CRTC3-207ENST00000560047 PRKCQQ04759 706 aa9.89□□□□□ -0.83
CRTC3-207ENST00000560047 SPACA3Q8IXA5 215 aa9.89□□□□□ -0.83
CRTC3-207ENST00000560047 SEC16BQ96JE7 1060 aa9.89□□□□□ -0.83
CRTC3-207ENST00000560047 PPT2Q9UMR5 302 aa9.89□□□□□ -0.83
CRTC3-207ENST00000560047 SLC5A6Q9Y289 635 aa9.89□□□□□ -0.83
CRTC3-207ENST00000560047 CPSF1Q10570 1443 aaKnown RBP9.89□□□□□ -0.83
CRTC3-207ENST00000560047 A0A1W2PP64 1363 aa9.88□□□□□ -0.83
CRTC3-207ENST00000560047 PRR33A8MZF0 331 aa9.88□□□□□ -0.83
CRTC3-207ENST00000560047 ADAMTS4O75173 837 aa9.88□□□□□ -0.83
CRTC3-207ENST00000560047 HDGFL2Q7Z4V5 671 aaPredicted RBP9.88□□□□□ -0.83
CRTC3-207ENST00000560047 BCL7CQ8WUZ0 217 aaPredicted RBP9.88□□□□□ -0.83
CRTC3-207ENST00000560047 HRASLS5Q96KN8 279 aa9.88□□□□□ -0.83
CRTC3-207ENST00000560047 CRBNQ96SW2 442 aa9.88□□□□□ -0.83
CRTC3-207ENST00000560047 TERF2IPQ9NYB0 399 aa9.88□□□□□ -0.83
CRTC3-207ENST00000560047 CAPN6Q9Y6Q1 641 aa9.88□□□□□ -0.83
CRTC3-207ENST00000560047 NPHP3Q7Z494 1330 aa9.87□□□□□ -0.83
CRTC3-207ENST00000560047 TOPAZ1Q8N9V7 1692 aa9.87□□□□□ -0.83
CRTC3-207ENST00000560047 ROBO1Q9Y6N7 1651 aa9.87□□□□□ -0.83
CRTC3-207ENST00000560047 NME1P15531 152 aaKnown RBP9.87□□□□□ -0.83
CRTC3-207ENST00000560047 HSPA1LP34931 641 aa9.87□□□□□ -0.83
CRTC3-207ENST00000560047 CCNFP41002 786 aa9.87□□□□□ -0.83
CRTC3-207ENST00000560047 CLCN7P51798 805 aa9.87□□□□□ -0.83
CRTC3-207ENST00000560047 GNL2Q13823 731 aaKnown RBP9.87□□□□□ -0.83
CRTC3-207ENST00000560047 AOC3Q16853 763 aa9.87□□□□□ -0.83
CRTC3-207ENST00000560047 INTS3Q68E01 1043 aaKnown RBP9.87□□□□□ -0.83
CRTC3-207ENST00000560047 VPS37DQ86XT2 251 aa9.87□□□□□ -0.83
CRTC3-207ENST00000560047 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.87□□□□□ -0.83
CRTC3-207ENST00000560047 RBBP8NLQ8NC74 664 aaPredicted RBP9.87□□□□□ -0.83
CRTC3-207ENST00000560047 RNF141Q8WVD5 230 aa9.87□□□□□ -0.83
CRTC3-207ENST00000560047 FBXL18Q96ME1 805 aa9.87□□□□□ -0.83
CRTC3-207ENST00000560047 KREMEN1Q96MU8 473 aa9.87□□□□□ -0.83
CRTC3-207ENST00000560047 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.87□□□□□ -0.83
CRTC3-207ENST00000560047 KTN1Q86UP2 1357 aaKnown RBP9.87□□□□□ -0.83
CRTC3-207ENST00000560047 ANKRD36BQ8N2N9 1353 aa9.87□□□□□ -0.83
CRTC3-207ENST00000560047 NINLQ9Y2I6 1382 aa9.87□□□□□ -0.83
CRTC3-207ENST00000560047 TTC21BQ7Z4L5 1316 aa9.86□□□□□ -0.83
CRTC3-207ENST00000560047 PIWIL2Q8TC59 973 aaKnown RBP9.86□□□□□ -0.83
CRTC3-207ENST00000560047 FBXO41Q8TF61 875 aa9.86□□□□□ -0.83
CRTC3-207ENST00000560047 KCNH3Q9ULD8 1083 aa9.86□□□□□ -0.83
CRTC3-207ENST00000560047 USP6P35125 1406 aa9.85□□□□□ -0.83
CRTC3-207ENST00000560047 SSH2Q76I76 1423 aa9.85□□□□□ -0.83
CRTC3-207ENST00000560047 TNFRSF10CO14798 259 aa9.85□□□□□ -0.83
CRTC3-207ENST00000560047 UBOX5O94941 541 aa9.85□□□□□ -0.83
CRTC3-207ENST00000560047 NASPP49321 788 aaPredicted RBP9.85□□□□□ -0.83
CRTC3-207ENST00000560047 BNIP3Q12983 259 aa9.85□□□□□ -0.83
CRTC3-207ENST00000560047 CDKAL1Q5VV42 579 aa9.85□□□□□ -0.83
CRTC3-207ENST00000560047 NME9Q86XW9 330 aa9.85□□□□□ -0.83
CRTC3-207ENST00000560047 FLCNQ8NFG4 579 aa9.85□□□□□ -0.83
CRTC3-207ENST00000560047 ASB11Q8WXH4 323 aa9.85□□□□□ -0.83
CRTC3-207ENST00000560047 TM9SF2Q99805 663 aa9.85□□□□□ -0.83
CRTC3-207ENST00000560047 ASPNQ9BXN1 380 aa9.85□□□□□ -0.83
CRTC3-207ENST00000560047 CAPN10Q9HC96 672 aa9.85□□□□□ -0.83
CRTC3-207ENST00000560047 MYOM1P52179 1685 aa9.85□□□□□ -0.83
CRTC3-207ENST00000560047 PXDNQ92626 1479 aa9.85□□□□□ -0.83
CRTC3-207ENST00000560047 ITSN1Q15811 1721 aa9.85□□□□□ -0.83
CRTC3-207ENST00000560047 SPATA31A3Q5VYP0 1347 aa9.84□□□□□ -0.83
CRTC3-207ENST00000560047 FYB1O15117 783 aa9.84□□□□□ -0.83
CRTC3-207ENST00000560047 TNK2Q07912 1038 aa9.84□□□□□ -0.83
CRTC3-207ENST00000560047 CNGB1Q14028 1251 aaPredicted RBP9.84□□□□□ -0.83
CRTC3-207ENST00000560047 HSPA12BQ96MM6 686 aa9.84□□□□□ -0.83
CRTC3-207ENST00000560047 SRRTQ9BXP5 876 aaKnown RBP9.84□□□□□ -0.83
CRTC3-207ENST00000560047 KIF1AQ12756 1690 aa9.83□□□□□ -0.84
CRTC3-207ENST00000560047 NSD3Q9BZ95 1437 aa9.83□□□□□ -0.84
CRTC3-207ENST00000560047 POLR2BP30876 1174 aaKnown RBP9.83□□□□□ -0.84
CRTC3-207ENST00000560047 GP2P55259 537 aaKnown RBP9.83□□□□□ -0.84
CRTC3-207ENST00000560047 EIF6P56537 245 aaKnown RBP9.83□□□□□ -0.84
CRTC3-207ENST00000560047 CCDC81Q6ZN84 652 aa9.83□□□□□ -0.84
CRTC3-207ENST00000560047 SPRED2Q7Z698 418 aa9.83□□□□□ -0.84
CRTC3-207ENST00000560047 TP53INP2Q8IXH6 220 aa9.83□□□□□ -0.84
CRTC3-207ENST00000560047 TAB3Q8N5C8 712 aaPredicted RBP9.83□□□□□ -0.84
CRTC3-207ENST00000560047 CPLX3Q8WVH0 158 aa9.83□□□□□ -0.84
CRTC3-207ENST00000560047 LRRC59Q96AG4 307 aaKnown RBP9.83□□□□□ -0.84
CRTC3-207ENST00000560047 Q96M66 194 aa9.83□□□□□ -0.84
CRTC3-207ENST00000560047 SLC9A7Q96T83 725 aa9.83□□□□□ -0.84
CRTC3-207ENST00000560047 KNSTRNQ9Y448 316 aa9.83□□□□□ -0.84
CRTC3-207ENST00000560047 ST14Q9Y5Y6 855 aa9.83□□□□□ -0.84
CRTC3-207ENST00000560047 EDC4Q6P2E9 1401 aaKnown RBP9.82□□□□□ -0.84
CRTC3-207ENST00000560047 NHSL1Q5SYE7 1610 aa9.82□□□□□ -0.84
CRTC3-207ENST00000560047 AHDC1Q5TGY3 1603 aaPredicted RBP9.82□□□□□ -0.84
CRTC3-207ENST00000560047 ATF4P18848 351 aaPredicted RBP9.82□□□□□ -0.84
CRTC3-207ENST00000560047 RNF4P78317 190 aa9.82□□□□□ -0.84
CRTC3-207ENST00000560047 AGBL5Q8NDL9 886 aa9.82□□□□□ -0.84
CRTC3-207ENST00000560047 VWCEQ96DN2 955 aa9.82□□□□□ -0.84
CRTC3-207ENST00000560047 DHRS1Q96LJ7 313 aa9.82□□□□□ -0.84
CRTC3-207ENST00000560047 PAK6Q9NQU5 681 aaPredicted RBP9.82□□□□□ -0.84
CRTC3-207ENST00000560047 STRIP2Q9ULQ0 834 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms