RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 GOLGA8HP0CJ92 632 aa9.1□□□□□ -0.95
SMAD3-212ENST00000559937 GCFC2P16383 781 aaKnown RBP9.1□□□□□ -0.95
SMAD3-212ENST00000559937 CASP1P29466 404 aa9.1□□□□□ -0.95
SMAD3-212ENST00000559937 FXR2P51116 673 aaKnown RBP eCLIP9.1□□□□□ -0.95
SMAD3-212ENST00000559937 COPB1P53618 953 aaKnown RBP9.1□□□□□ -0.95
SMAD3-212ENST00000559937 STX17P56962 302 aa9.1□□□□□ -0.95
SMAD3-212ENST00000559937 ZNF543Q08ER8 600 aa9.1□□□□□ -0.95
SMAD3-212ENST00000559937 KRT31Q15323 416 aa9.1□□□□□ -0.95
SMAD3-212ENST00000559937 SLC15A2Q16348 729 aa9.1□□□□□ -0.95
SMAD3-212ENST00000559937 TMEM266Q2M3C6 531 aa9.1□□□□□ -0.95
SMAD3-212ENST00000559937 MCTP2Q6DN12 878 aa9.1□□□□□ -0.95
SMAD3-212ENST00000559937 CNNM4Q6P4Q7 775 aa9.1□□□□□ -0.95
SMAD3-212ENST00000559937 COL23A1Q86Y22 540 aaPredicted RBP9.1□□□□□ -0.95
SMAD3-212ENST00000559937 HOMER1Q86YM7 354 aa9.1□□□□□ -0.95
SMAD3-212ENST00000559937 IGSF22Q8N9C0 903 aa9.1□□□□□ -0.95
SMAD3-212ENST00000559937 GIMAP8Q8ND71 665 aaPredicted RBP9.1□□□□□ -0.95
SMAD3-212ENST00000559937 MTMR8Q96EF0 704 aa9.1□□□□□ -0.95
SMAD3-212ENST00000559937 CALML4Q96GE6 196 aa9.1□□□□□ -0.95
SMAD3-212ENST00000559937 DHTKD1Q96HY7 919 aaPredicted RBP9.1□□□□□ -0.95
SMAD3-212ENST00000559937 ZDHHC15Q96MV8 337 aa9.1□□□□□ -0.95
SMAD3-212ENST00000559937 RAB34Q9BZG1 259 aa9.1□□□□□ -0.95
SMAD3-212ENST00000559937 LRRC27Q9C0I9 530 aa9.1□□□□□ -0.95
SMAD3-212ENST00000559937 PDGFDQ9GZP0 370 aaPredicted RBP9.1□□□□□ -0.95
SMAD3-212ENST00000559937 BLZF1Q9H2G9 400 aa9.1□□□□□ -0.95
SMAD3-212ENST00000559937 DDX4Q9NQI0 724 aaKnown RBP9.1□□□□□ -0.95
SMAD3-212ENST00000559937 PARP3Q9Y6F1 533 aa9.1□□□□□ -0.95
SMAD3-212ENST00000559937 A0A1W2PQC6 194 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 BICDL2A1A5D9 508 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 KCNJ18B7U540 433 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 G3V3G9 751 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 RIMBP2O15034 1052 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 TEX33O43247 280 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 CCNT1O60563 726 aaKnown RBP9.09□□□□□ -0.95
SMAD3-212ENST00000559937 CCDC175P0C221 793 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 AKR1B1P15121 316 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 PLCG1P19174 1290 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 CCNE1P24864 410 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 SHMT1P34896 483 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 PRCPP42785 496 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 KCNJ12Q14500 433 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 PDIA5Q14554 519 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 LETM2Q2VYF4 491 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 KMT5BQ4FZB7 885 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 TCP11X2Q5H9J9 407 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 DCAF8Q5TAQ9 597 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 STRIP1Q5VSL9 837 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 CDC42EP5Q6NZY7 148 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 FOXR2Q6PJQ5 311 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 SYT10Q6XYQ8 523 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 TEX2Q8IWB9 1127 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 FAM114A1Q8IWE2 563 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 SMYD4Q8IYR2 804 aaPredicted RBP9.09□□□□□ -0.95
SMAD3-212ENST00000559937 ZNF397Q8NF99 534 aaPredicted RBP9.09□□□□□ -0.95
SMAD3-212ENST00000559937 RASSF8Q8NHQ8 419 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 TBCKQ8TEA7 893 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 TSC1Q92574 1164 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 STAMQ92783 540 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 MKL1Q969V6 931 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 IQCDQ96DY2 449 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 MTMR9Q96QG7 549 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 FEZ1Q99689 392 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 IDI2Q9BXS1 227 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 RIC8AQ9NPQ8 531 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 EXOC1Q9NV70 894 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 STK32BQ9NY57 414 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 NYAP2Q9P242 653 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 DNAI1Q9UI46 699 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 ZNF215Q9UL58 517 aaPredicted RBP9.09□□□□□ -0.95
SMAD3-212ENST00000559937 KIF13BQ9NQT8 1826 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 LOXHD1Q8IVV2 1947 aa9.09□□□□□ -0.95
SMAD3-212ENST00000559937 PVALEFA0A1B0GWK0 134 aa9.08□□□□□ -0.96
SMAD3-212ENST00000559937 LGALS16A8MUM7 142 aa9.08□□□□□ -0.96
SMAD3-212ENST00000559937 N4BP3O15049 544 aa9.08□□□□□ -0.96
SMAD3-212ENST00000559937 CRKP46108 304 aa9.08□□□□□ -0.96
SMAD3-212ENST00000559937 CLK2P49760 499 aaKnown RBP9.08□□□□□ -0.96
SMAD3-212ENST00000559937 MRPL12P52815 198 aaKnown RBP9.08□□□□□ -0.96
SMAD3-212ENST00000559937 ADKP55263 362 aaKnown RBP9.08□□□□□ -0.96
SMAD3-212ENST00000559937 RBL2Q08999 1139 aa9.08□□□□□ -0.96
SMAD3-212ENST00000559937 PICALMQ13492 652 aa9.08□□□□□ -0.96
SMAD3-212ENST00000559937 TUBB2AQ13885 445 aa9.08□□□□□ -0.96
SMAD3-212ENST00000559937 SEPT2Q15019 361 aa9.08□□□□□ -0.96
SMAD3-212ENST00000559937 CALCRLQ16602 461 aa9.08□□□□□ -0.96
SMAD3-212ENST00000559937 HSP90AA4PQ58FG1 418 aa9.08□□□□□ -0.96
SMAD3-212ENST00000559937 CC2D2BQ6DHV5 1058 aa9.08□□□□□ -0.96
SMAD3-212ENST00000559937 PPP4R3AQ6IN85 833 aa9.08□□□□□ -0.96
SMAD3-212ENST00000559937 APOBEC3HQ6NTF7 200 aaKnown RBP9.08□□□□□ -0.96
SMAD3-212ENST00000559937 TMTC1Q8IUR5 882 aa9.08□□□□□ -0.96
SMAD3-212ENST00000559937 DCAF4Q8WV16 495 aa9.08□□□□□ -0.96
SMAD3-212ENST00000559937 TUBB2BQ9BVA1 445 aa9.08□□□□□ -0.96
SMAD3-212ENST00000559937 TRIM9Q9C026 710 aa9.08□□□□□ -0.96
SMAD3-212ENST00000559937 UBA5Q9GZZ9 404 aa9.08□□□□□ -0.96
SMAD3-212ENST00000559937 JMJD4Q9H9V9 463 aa9.08□□□□□ -0.96
SMAD3-212ENST00000559937 SYNPO2Q9UMS6 1093 aa9.08□□□□□ -0.96
SMAD3-212ENST00000559937 MTMR7Q9Y216 660 aa9.08□□□□□ -0.96
SMAD3-212ENST00000559937 GDAQ9Y2T3 454 aa9.08□□□□□ -0.96
SMAD3-212ENST00000559937 ABCB11O95342 1321 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 GOLGB1Q14789 3259 aaKnown RBP9.07□□□□□ -0.96
SMAD3-212ENST00000559937 PP2D1A8MPX8 630 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 ZBTB5O15062 677 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 GYPCP04921 128 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms