RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 FAM184BQ9ULE4 1060 aa20.88■□□□□ 0.93
HDDC3-205ENST00000559898 A0A1W2PPC1 479 aa20.87■□□□□ 0.93
HDDC3-205ENST00000559898 CTAGE5O15320 804 aa20.87■□□□□ 0.93
HDDC3-205ENST00000559898 ICAM1P05362 532 aa20.87■□□□□ 0.93
HDDC3-205ENST00000559898 MFAP1P55081 439 aaKnown RBP20.87■□□□□ 0.93
HDDC3-205ENST00000559898 TLE2Q04725 743 aa20.87■□□□□ 0.93
HDDC3-205ENST00000559898 EEPD1Q7L9B9 569 aa20.87■□□□□ 0.93
HDDC3-205ENST00000559898 PRDM5Q9NQX1 630 aaPredicted RBP20.87■□□□□ 0.93
HDDC3-205ENST00000559898 ZSWIM5Q9P217 1185 aa20.87■□□□□ 0.93
HDDC3-205ENST00000559898 KCNA10Q16322 511 aa20.86■□□□□ 0.93
HDDC3-205ENST00000559898 RNF180Q86T96 592 aa20.86■□□□□ 0.93
HDDC3-205ENST00000559898 TDHQ8IZJ6 230 aa20.86■□□□□ 0.93
HDDC3-205ENST00000559898 CLEC4DQ8WXI8 215 aa20.86■□□□□ 0.93
HDDC3-205ENST00000559898 ESR2Q92731 530 aa20.86■□□□□ 0.93
HDDC3-205ENST00000559898 HIP1O00291 1037 aa20.85■□□□□ 0.93
HDDC3-205ENST00000559898 ACLYP53396 1101 aa20.85■□□□□ 0.93
HDDC3-205ENST00000559898 BEX3Q00994 111 aa20.85■□□□□ 0.93
HDDC3-205ENST00000559898 BAATQ14032 418 aaPredicted RBP20.85■□□□□ 0.93
HDDC3-205ENST00000559898 TKFCQ3LXA3 575 aa20.85■□□□□ 0.93
HDDC3-205ENST00000559898 SLC30A10Q6XR72 485 aa20.85■□□□□ 0.93
HDDC3-205ENST00000559898 Q7L0L9 218 aa20.85■□□□□ 0.93
HDDC3-205ENST00000559898 CYB5R4Q7L1T6 521 aa20.85■□□□□ 0.93
HDDC3-205ENST00000559898 FBXO16Q8IX29 292 aaPredicted RBP20.85■□□□□ 0.93
HDDC3-205ENST00000559898 ENAHQ8N8S7 591 aaPredicted RBP20.85■□□□□ 0.93
HDDC3-205ENST00000559898 TTC14Q96N46 770 aa20.85■□□□□ 0.93
HDDC3-205ENST00000559898 ABHD16BQ9H3Z7 469 aa20.85■□□□□ 0.93
HDDC3-205ENST00000559898 RNF41Q9H4P4 317 aaPredicted RBP20.85■□□□□ 0.93
HDDC3-205ENST00000559898 LAMA2P24043 3122 aaKnown RBP20.84■□□□□ 0.93
HDDC3-205ENST00000559898 DUSP11O75319 330 aaKnown RBP20.84■□□□□ 0.93
HDDC3-205ENST00000559898 CHMLP26374 656 aa20.84■□□□□ 0.93
HDDC3-205ENST00000559898 BADQ92934 168 aa20.84■□□□□ 0.93
HDDC3-205ENST00000559898 PQBP1O60828 265 aaKnown RBP20.83■□□□□ 0.93
HDDC3-205ENST00000559898 C6orf222P0C671 652 aaPredicted RBP20.83■□□□□ 0.93
HDDC3-205ENST00000559898 PCP11498 1178 aaKnown RBP20.83■□□□□ 0.93
HDDC3-205ENST00000559898 TAPT1Q6NXT6 567 aa20.83■□□□□ 0.93
HDDC3-205ENST00000559898 DGKHQ86XP1 1220 aa20.83■□□□□ 0.93
HDDC3-205ENST00000559898 PNMA1Q8ND90 353 aa20.83■□□□□ 0.93
HDDC3-205ENST00000559898 TBC1D5Q92609 795 aa20.83■□□□□ 0.93
HDDC3-205ENST00000559898 ZSCAN10Q96SZ4 725 aaPredicted RBP20.83■□□□□ 0.93
HDDC3-205ENST00000559898 UPF3AQ9H1J1 476 aaKnown RBP20.83■□□□□ 0.93
HDDC3-205ENST00000559898 SENP2Q9HC62 589 aa20.83■□□□□ 0.93
HDDC3-205ENST00000559898 TNKSO95271 1327 aa20.82■□□□□ 0.92
HDDC3-205ENST00000559898 ASGR1P07306 291 aa20.82■□□□□ 0.92
HDDC3-205ENST00000559898 SMPD1P17405 629 aa20.82■□□□□ 0.92
HDDC3-205ENST00000559898 GJA9P57773 515 aa20.82■□□□□ 0.92
HDDC3-205ENST00000559898 IMMTQ16891 758 aaKnown RBP20.82■□□□□ 0.92
HDDC3-205ENST00000559898 C9orf50Q5SZB4 431 aa20.82■□□□□ 0.92
HDDC3-205ENST00000559898 C1orf53Q5VUE5 145 aa20.82■□□□□ 0.92
HDDC3-205ENST00000559898 GNEQ9Y223 722 aaKnown RBP20.82■□□□□ 0.92
HDDC3-205ENST00000559898 MYH6P13533 1939 aa20.82■□□□□ 0.92
HDDC3-205ENST00000559898 PTPDC1A2A3K4 754 aa20.81■□□□□ 0.92
HDDC3-205ENST00000559898 EPHB4P54760 987 aa20.81■□□□□ 0.92
HDDC3-205ENST00000559898 COL9A3Q14050 684 aaPredicted RBP20.81■□□□□ 0.92
HDDC3-205ENST00000559898 LRIT3Q3SXY7 679 aa20.81■□□□□ 0.92
HDDC3-205ENST00000559898 USH1GQ495M9 461 aa20.81■□□□□ 0.92
HDDC3-205ENST00000559898 STAG2Q8N3U4 1231 aa20.81■□□□□ 0.92
HDDC3-205ENST00000559898 ANKS1AQ92625 1134 aa20.81■□□□□ 0.92
HDDC3-205ENST00000559898 TSEN34Q9BSV6 310 aaKnown RBP20.81■□□□□ 0.92
HDDC3-205ENST00000559898 STARD7Q9NQZ5 370 aa20.81■□□□□ 0.92
HDDC3-205ENST00000559898 CYP21A2P08686 494 aa20.8■□□□□ 0.92
HDDC3-205ENST00000559898 CALML3P27482 149 aa20.8■□□□□ 0.92
HDDC3-205ENST00000559898 CST5P28325 142 aaPredicted RBP20.8■□□□□ 0.92
HDDC3-205ENST00000559898 ALDH5A1P51649 535 aaPredicted RBP20.8■□□□□ 0.92
HDDC3-205ENST00000559898 TNFAIP2Q03169 654 aa20.8■□□□□ 0.92
HDDC3-205ENST00000559898 FAAP100Q0VG06 881 aa20.8■□□□□ 0.92
HDDC3-205ENST00000559898 SEC23AQ15436 765 aa20.8■□□□□ 0.92
HDDC3-205ENST00000559898 SHHQ15465 462 aa20.8■□□□□ 0.92
HDDC3-205ENST00000559898 STOX1Q6ZVD7 989 aa20.8■□□□□ 0.92
HDDC3-205ENST00000559898 LBHD1Q9BQE6 289 aaPredicted RBP20.8■□□□□ 0.92
HDDC3-205ENST00000559898 ASB14A6NK59 587 aa20.79■□□□□ 0.92
HDDC3-205ENST00000559898 CLTBP09497 229 aa20.79■□□□□ 0.92
HDDC3-205ENST00000559898 SLC35G1Q2M3R5 365 aa20.79■□□□□ 0.92
HDDC3-205ENST00000559898 GNASQ5JWF2 1037 aa20.79■□□□□ 0.92
HDDC3-205ENST00000559898 ADGRF4Q8IZF3 695 aa20.79■□□□□ 0.92
HDDC3-205ENST00000559898 MORC4Q8TE76 937 aa20.79■□□□□ 0.92
HDDC3-205ENST00000559898 KAT14Q9H8E8 782 aa20.79■□□□□ 0.92
HDDC3-205ENST00000559898 PRKAG2Q9UGJ0 569 aa20.79■□□□□ 0.92
HDDC3-205ENST00000559898 CDC37Q16543 378 aaPredicted RBP20.78■□□□□ 0.92
HDDC3-205ENST00000559898 NOL8Q76FK4 1167 aaKnown RBP20.78■□□□□ 0.92
HDDC3-205ENST00000559898 CHST3Q7LGC8 479 aa20.78■□□□□ 0.92
HDDC3-205ENST00000559898 IQCA1Q86XH1 822 aa20.78■□□□□ 0.92
HDDC3-205ENST00000559898 VAT1LQ9HCJ6 419 aa20.78■□□□□ 0.92
HDDC3-205ENST00000559898 CTNNA3Q9UI47 895 aa20.78■□□□□ 0.92
HDDC3-205ENST00000559898 MOXD2PA6NHM9 499 aa20.77■□□□□ 0.92
HDDC3-205ENST00000559898 RBAK-RBAKDNI3L0D1 243 aa20.77■□□□□ 0.92
HDDC3-205ENST00000559898 SGSM2O43147 1006 aa20.77■□□□□ 0.92
HDDC3-205ENST00000559898 DYNC1LI2O43237 492 aaPredicted RBP20.77■□□□□ 0.92
HDDC3-205ENST00000559898 CDK7P50613 346 aa20.77■□□□□ 0.92
HDDC3-205ENST00000559898 RPS6P62753 249 aaKnown RBP20.77■□□□□ 0.92
HDDC3-205ENST00000559898 RNF207Q6ZRF8 634 aa20.77■□□□□ 0.92
HDDC3-205ENST00000559898 TLK2Q86UE8 772 aa20.77■□□□□ 0.92
HDDC3-205ENST00000559898 KRT23Q9C075 422 aa20.77■□□□□ 0.92
HDDC3-205ENST00000559898 COL20A1Q9P218 1284 aa20.77■□□□□ 0.92
HDDC3-205ENST00000559898 GRIN2DO15399 1336 aa20.77■□□□□ 0.91
HDDC3-205ENST00000559898 RAD50Q92878 1312 aa20.77■□□□□ 0.91
HDDC3-205ENST00000559898 NKX3-2P78367 333 aa20.76■□□□□ 0.91
HDDC3-205ENST00000559898 QRICH1Q2TAL8 776 aa20.76■□□□□ 0.91
HDDC3-205ENST00000559898 GPATCH4Q5T3I0 446 aaKnown RBP20.76■□□□□ 0.91
HDDC3-205ENST00000559898 CXCL17Q6UXB2 119 aa20.76■□□□□ 0.91
HDDC3-205ENST00000559898 KIAA1211Q6ZU35 1233 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms