RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 RBM12Q9NTZ6 932 aaKnown RBP7.36□□□□□ -1.23
ZEB1-217ENST00000559858 LRWD1Q9UFC0 647 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 SWAP70Q9UH65 585 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.36□□□□□ -1.23
ZEB1-217ENST00000559858 TECPR2O15040 1411 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 NWD1Q149M9 1564 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 A0A087X0B3 334 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 A6NHS1 94 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 IFIT3O14879 490 aaKnown RBP7.36□□□□□ -1.23
ZEB1-217ENST00000559858 ORC4O43929 436 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 RANBP6O60518 1105 aaKnown RBP7.36□□□□□ -1.23
ZEB1-217ENST00000559858 FMNL1O95466 1100 aaPredicted RBP7.36□□□□□ -1.23
ZEB1-217ENST00000559858 FERP16591 822 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 RXRAP19793 462 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 DRD4P21917 467 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 PPP2R2AP63151 447 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 CYP27A1Q02318 531 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 RABL6Q3YEC7 729 aaPredicted RBP7.36□□□□□ -1.23
ZEB1-217ENST00000559858 ODF2Q5BJF6 829 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 AGBL2Q5U5Z8 902 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 ANKS4BQ8N8V4 417 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 DRAXINQ8NBI3 349 aaPredicted RBP7.36□□□□□ -1.23
ZEB1-217ENST00000559858 CCDC197Q8NCU1 140 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 CNKSR1Q969H4 720 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 LTV1Q96GA3 475 aaPredicted RBP7.36□□□□□ -1.23
ZEB1-217ENST00000559858 EPSTI1Q96J88 318 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 ZNF570Q96NI8 536 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 MOV10L1Q9BXT6 1211 aaKnown RBP7.36□□□□□ -1.23
ZEB1-217ENST00000559858 NDST4Q9H3R1 872 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 SH2D4AQ9H788 454 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 EID1Q9Y6B2 187 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 MYO5AQ9Y4I1 1855 aaKnown RBP7.36□□□□□ -1.23
ZEB1-217ENST00000559858 H7C1W4 665 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 FOXP2O15409 715 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 CAND2O75155 1236 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 RTN3O95197 1032 aaPredicted RBP7.36□□□□□ -1.23
ZEB1-217ENST00000559858 MOCS3O95396 460 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 CCND1P24385 295 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 EEF1GP26641 437 aaKnown RBP7.36□□□□□ -1.23
ZEB1-217ENST00000559858 SNX1Q13596 522 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 ZNF268Q14587 947 aaPredicted RBP7.36□□□□□ -1.23
ZEB1-217ENST00000559858 CWF19L1Q69YN2 538 aaKnown RBP7.36□□□□□ -1.23
ZEB1-217ENST00000559858 NFXL1Q6ZNB6 911 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 PNMA8AQ86V59 439 aaPredicted RBP7.36□□□□□ -1.23
ZEB1-217ENST00000559858 MICU3Q86XE3 530 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 EIF1ADQ8N9N8 165 aaKnown RBP7.36□□□□□ -1.23
ZEB1-217ENST00000559858 SMCR8Q8TEV9 937 aaPredicted RBP7.36□□□□□ -1.23
ZEB1-217ENST00000559858 CASKIN2Q8WXE0 1202 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 TMEM87BQ96K49 555 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 CCDC42Q96M95 316 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 PAIP2Q9BPZ3 127 aaKnown RBP7.36□□□□□ -1.23
ZEB1-217ENST00000559858 SLC5A4Q9NY91 659 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.36□□□□□ -1.233e-8■■■■□ 21.3
ZEB1-217ENST00000559858 SMARCAL1Q9NZC9 954 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 TSKSQ9UJT2 592 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 L3MBTL1Q9Y468 752 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 CAPN6Q9Y6Q1 641 aa7.36□□□□□ -1.23
ZEB1-217ENST00000559858 SETD1BQ9UPS6 1966 aaKnown RBP7.36□□□□□ -1.23
ZEB1-217ENST00000559858 TRIM75PA6NK02 468 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 DIAPH2O60879 1101 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 SRGNP10124 158 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 TRIM21P19474 475 aaKnown RBP7.35□□□□□ -1.23
ZEB1-217ENST00000559858 TMOD1P28289 359 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 CXCR5P32302 372 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 PAPOLAP51003 745 aaKnown RBP7.35□□□□□ -1.23
ZEB1-217ENST00000559858 MKRN4PQ13434 485 aaPredicted RBP7.35□□□□□ -1.23
ZEB1-217ENST00000559858 ZNF658Q5TYW1 1059 aaPredicted RBP7.35□□□□□ -1.23
ZEB1-217ENST00000559858 CYB5R4Q7L1T6 521 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 IRF2BP1Q8IU81 584 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 RPUSD2Q8IZ73 545 aaKnown RBP7.35□□□□□ -1.23
ZEB1-217ENST00000559858 AGAP11Q8TF27 550 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 SYMPKQ92797 1274 aaKnown RBP7.35□□□□□ -1.23
ZEB1-217ENST00000559858 FERMT2Q96AC1 680 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 LRRC45Q96CN5 670 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 METTL22Q9BUU2 404 aaPredicted RBP7.35□□□□□ -1.23
ZEB1-217ENST00000559858 IFIH1Q9BYX4 1025 aaKnown RBP7.35□□□□□ -1.23
ZEB1-217ENST00000559858 MLXIPQ9HAP2 919 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 SENP2Q9HC62 589 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 FAM217BQ9NTX9 383 aaPredicted RBP7.35□□□□□ -1.23
ZEB1-217ENST00000559858 RMND1Q9NWS8 449 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 MAGEC2Q9UBF1 373 aaPredicted RBP7.35□□□□□ -1.23
ZEB1-217ENST00000559858 KCNJ14Q9UNX9 436 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 SLC12A4Q9UP95 1085 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 PCDHA13Q9Y5I0 950 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 DDX60Q8IY21 1712 aaKnown RBP7.35□□□□□ -1.23
ZEB1-217ENST00000559858 PDS5AQ29RF7 1337 aaKnown RBP7.35□□□□□ -1.23
ZEB1-217ENST00000559858 ESYT3A0FGR9 886 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 PHF20L1A8MW92 1017 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 GTPBP6O43824 516 aaPredicted RBP7.35□□□□□ -1.23
ZEB1-217ENST00000559858 BMP15O95972 392 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 LINGO3P0C6S8 592 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 CSB-PGBD3P0DP91 1061 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 ALADP13716 330 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 IFNAR1P17181 557 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 TIMM10P62072 90 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 ROR2Q01974 943 aaKnown RBP7.35□□□□□ -1.23
ZEB1-217ENST00000559858 PSMD2Q13200 908 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 CACNA2D4Q7Z3S7 1137 aa7.35□□□□□ -1.23
ZEB1-217ENST00000559858 APLFQ8IW19 511 aaPredicted RBP7.35□□□□□ -1.23
ZEB1-217ENST00000559858 TRIM22Q8IYM9 498 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms