RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 PRRT2Q7Z6L0 340 aaPredicted RBP19.83■□□□□ 0.76
CHRNA3-206ENST00000559658 TBC1D5Q92609 795 aa19.83■□□□□ 0.76
CHRNA3-206ENST00000559658 PSTPIP2Q9H939 334 aa19.83■□□□□ 0.76
CHRNA3-206ENST00000559658 SLC38A10Q9HBR0 1119 aa19.83■□□□□ 0.76
CHRNA3-206ENST00000559658 RAVER2Q9HCJ3 691 aaKnown RBP19.83■□□□□ 0.76
CHRNA3-206ENST00000559658 CCDC194A0A1B0GVG4 234 aa19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 MEIS2O14770 477 aa19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 EDIL3O43854 480 aa19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 YEATS4O95619 227 aa19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 GRIN1Q05586 938 aa19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 PPIL2Q13356 520 aa19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 ZNF174Q15697 407 aa19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 ATL3Q6DD88 541 aa19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 GADL1Q6ZQY3 521 aa19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 CATSPERGQ6ZRH7 1159 aa19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 CPXCR1Q8N123 301 aa19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 CUL5Q93034 780 aa19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 PCDHA7Q9UN72 937 aa19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 KCNH4Q9UQ05 1017 aa19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 RBBP6Q7Z6E9 1792 aaKnown RBP19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 SPTLC2O15270 562 aa19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 HOXA13P31271 388 aaPredicted RBP19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 UBE2HP62256 183 aa19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 SLC39A14Q15043 492 aa19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 TTC38Q5R3I4 469 aa19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 FAM177A1Q8N128 213 aaPredicted RBP19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 RBM46Q8TBY0 533 aaKnown RBP19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 GZF1Q9H116 711 aaPredicted RBP19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.82■□□□□ 0.76
CHRNA3-206ENST00000559658 VWA5AO00534 786 aa19.81■□□□□ 0.76
CHRNA3-206ENST00000559658 ME1P48163 572 aa19.81■□□□□ 0.76
CHRNA3-206ENST00000559658 REPS2Q8NFH8 660 aa19.81■□□□□ 0.76
CHRNA3-206ENST00000559658 CCPG1Q9ULG6 757 aa19.81■□□□□ 0.76
CHRNA3-206ENST00000559658 SPDYE16A6NNV3 312 aaPredicted RBP19.8■□□□□ 0.76
CHRNA3-206ENST00000559658 ICAM1P05362 532 aa19.8■□□□□ 0.76
CHRNA3-206ENST00000559658 LIG1P18858 919 aa19.8■□□□□ 0.76
CHRNA3-206ENST00000559658 KLHL40Q2TBA0 621 aa19.8■□□□□ 0.76
CHRNA3-206ENST00000559658 TBCKQ8TEA7 893 aa19.8■□□□□ 0.76
CHRNA3-206ENST00000559658 CLIC6Q96NY7 704 aa19.8■□□□□ 0.76
CHRNA3-206ENST00000559658 GOLPH3LQ9H4A5 285 aa19.8■□□□□ 0.76
CHRNA3-206ENST00000559658 HOMER2Q9NSB8 354 aa19.8■□□□□ 0.76
CHRNA3-206ENST00000559658 DSG3P32926 999 aa19.79■□□□□ 0.76
CHRNA3-206ENST00000559658 MCM7P33993 719 aa19.79■□□□□ 0.76
CHRNA3-206ENST00000559658 AXDND1Q5T1B0 1012 aaPredicted RBP19.79■□□□□ 0.76
CHRNA3-206ENST00000559658 KRT25Q7Z3Z0 450 aa19.79■□□□□ 0.76
CHRNA3-206ENST00000559658 SLC10A4Q96EP9 437 aa19.79■□□□□ 0.76
CHRNA3-206ENST00000559658 RIPK3Q9Y572 518 aa19.79■□□□□ 0.76
CHRNA3-206ENST00000559658 NFIBO00712 420 aa19.79■□□□□ 0.76
CHRNA3-206ENST00000559658 KIF3CO14782 793 aa19.79■□□□□ 0.76
CHRNA3-206ENST00000559658 NONOQ15233 471 aaKnown RBP eCLIP19.79■□□□□ 0.76
CHRNA3-206ENST00000559658 CSPP1Q1MSJ5 1256 aa19.79■□□□□ 0.76
CHRNA3-206ENST00000559658 MUM1L1Q5H9M0 696 aa19.79■□□□□ 0.76
CHRNA3-206ENST00000559658 CAVIN1Q6NZI2 390 aaKnown RBP19.79■□□□□ 0.76
CHRNA3-206ENST00000559658 BICD2Q8TD16 824 aa19.79■□□□□ 0.76
CHRNA3-206ENST00000559658 GPBP1L1Q9HC44 474 aaPredicted RBP19.79■□□□□ 0.76
CHRNA3-206ENST00000559658 TMEM63CQ9P1W3 806 aa19.79■□□□□ 0.76
CHRNA3-206ENST00000559658 NOL7Q9UMY1 257 aaKnown RBP19.79■□□□□ 0.76
CHRNA3-206ENST00000559658 TMEM132BQ14DG7 1078 aa19.78■□□□□ 0.76
CHRNA3-206ENST00000559658 KCNG4Q8TDN1 519 aa19.78■□□□□ 0.76
CHRNA3-206ENST00000559658 ANP32EQ9BTT0 268 aa19.78■□□□□ 0.76
CHRNA3-206ENST00000559658 ADAMTS5Q9UNA0 930 aa19.78■□□□□ 0.76
CHRNA3-206ENST00000559658 CXCL11O14625 94 aa19.77■□□□□ 0.76
CHRNA3-206ENST00000559658 ALAS1P13196 640 aa19.77■□□□□ 0.76
CHRNA3-206ENST00000559658 PTMSP20962 102 aa19.77■□□□□ 0.76
CHRNA3-206ENST00000559658 MRPL12P52815 198 aaKnown RBP19.77■□□□□ 0.76
CHRNA3-206ENST00000559658 COG2Q14746 738 aa19.77■□□□□ 0.76
CHRNA3-206ENST00000559658 LETM2Q2VYF4 491 aa19.77■□□□□ 0.76
CHRNA3-206ENST00000559658 C2orf69Q8N8R5 385 aa19.77■□□□□ 0.76
CHRNA3-206ENST00000559658 PROCA1Q8NCQ7 364 aaPredicted RBP19.77■□□□□ 0.76
CHRNA3-206ENST00000559658 CLEC4DQ8WXI8 215 aa19.77■□□□□ 0.76
CHRNA3-206ENST00000559658 FBXO2Q9UK22 296 aaPredicted RBP19.77■□□□□ 0.76
CHRNA3-206ENST00000559658 ZNF214Q9UL59 606 aaPredicted RBP19.77■□□□□ 0.76
CHRNA3-206ENST00000559658 CFBP00751 764 aa19.77■□□□□ 0.76
CHRNA3-206ENST00000559658 SPECC1Q5M775 1068 aa19.77■□□□□ 0.76
CHRNA3-206ENST00000559658 GPAT2Q6NUI2 795 aa19.77■□□□□ 0.76
CHRNA3-206ENST00000559658 ANO3Q9BYT9 981 aa19.77■□□□□ 0.76
CHRNA3-206ENST00000559658 TMEM60Q9H2L4 133 aa19.77■□□□□ 0.76
CHRNA3-206ENST00000559658 ABCB11O95342 1321 aa19.76■□□□□ 0.75
CHRNA3-206ENST00000559658 TDP2O95551 362 aa19.76■□□□□ 0.75
CHRNA3-206ENST00000559658 TRAPPC10P48553 1259 aa19.76■□□□□ 0.75
CHRNA3-206ENST00000559658 FKBP1BP68106 108 aa19.76■□□□□ 0.75
CHRNA3-206ENST00000559658 PTGDRQ13258 359 aa19.76■□□□□ 0.75
CHRNA3-206ENST00000559658 PASKQ96RG2 1323 aa19.75■□□□□ 0.75
CHRNA3-206ENST00000559658 IL17AQ16552 155 aa19.75■□□□□ 0.75
CHRNA3-206ENST00000559658 NEK8Q86SG6 692 aa19.75■□□□□ 0.75
CHRNA3-206ENST00000559658 C4orf32Q8N8J7 132 aa19.75■□□□□ 0.75
CHRNA3-206ENST00000559658 MS4A4AQ96JQ5 239 aa19.75■□□□□ 0.75
CHRNA3-206ENST00000559658 COL20A1Q9P218 1284 aa19.75■□□□□ 0.75
CHRNA3-206ENST00000559658 AGTPBP1Q9UPW5 1226 aa19.75■□□□□ 0.75
CHRNA3-206ENST00000559658 SLC37A4O43826 429 aa19.75■□□□□ 0.75
CHRNA3-206ENST00000559658 ZBED4O75132 1171 aa19.75■□□□□ 0.75
CHRNA3-206ENST00000559658 PPP6R2O75170 966 aa19.75■□□□□ 0.75
CHRNA3-206ENST00000559658 MBD3O95983 291 aa19.75■□□□□ 0.75
CHRNA3-206ENST00000559658 SNRNP48Q6IEG0 339 aaKnown RBP19.75■□□□□ 0.75
CHRNA3-206ENST00000559658 SHC4Q6S5L8 630 aa19.75■□□□□ 0.75
CHRNA3-206ENST00000559658 FCHSD1Q86WN1 690 aa19.75■□□□□ 0.75
CHRNA3-206ENST00000559658 CCAR1Q8IX12 1150 aaKnown RBP19.75■□□□□ 0.75
CHRNA3-206ENST00000559658 ASCC2Q9H1I8 757 aaPredicted RBP19.75■□□□□ 0.75
CHRNA3-206ENST00000559658 R3HDMLQ9H3Y0 253 aa19.75■□□□□ 0.75
CHRNA3-206ENST00000559658 BTBD7Q9P203 1132 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms