RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 PPP1R11O60927 126 aaPredicted RBP23.56■■□□□ 1.36
TSPAN3-207ENST00000559494 CDC27P30260 824 aa23.56■■□□□ 1.36
TSPAN3-207ENST00000559494 RCAN1P53805 252 aa23.56■■□□□ 1.36
TSPAN3-207ENST00000559494 RTN1Q16799 776 aa23.56■■□□□ 1.36
TSPAN3-207ENST00000559494 USH1GQ495M9 461 aa23.56■■□□□ 1.36
TSPAN3-207ENST00000559494 TMTC3Q6ZXV5 915 aa23.56■■□□□ 1.36
TSPAN3-207ENST00000559494 FBXO11Q86XK2 927 aa23.56■■□□□ 1.36
TSPAN3-207ENST00000559494 TRIB2Q92519 343 aa23.56■■□□□ 1.36
TSPAN3-207ENST00000559494 KIF2CQ99661 725 aa23.56■■□□□ 1.36
TSPAN3-207ENST00000559494 APBA2Q99767 749 aa23.56■■□□□ 1.36
TSPAN3-207ENST00000559494 ALDH8A1Q9H2A2 487 aaPredicted RBP23.56■■□□□ 1.36
TSPAN3-207ENST00000559494 FLRT1Q9NZU1 646 aa23.56■■□□□ 1.36
TSPAN3-207ENST00000559494 DNAJC25-GNG10A0A024R161 153 aa23.55■■□□□ 1.36
TSPAN3-207ENST00000559494 PDIA3P30101 505 aaKnown RBP23.55■■□□□ 1.36
TSPAN3-207ENST00000559494 RBM25P49756 843 aaKnown RBP23.55■■□□□ 1.36
TSPAN3-207ENST00000559494 ZNF792Q3KQV3 632 aa23.55■■□□□ 1.36
TSPAN3-207ENST00000559494 HOMER1Q86YM7 354 aa23.55■■□□□ 1.36
TSPAN3-207ENST00000559494 ANKRD35Q8N283 1001 aa23.55■■□□□ 1.36
TSPAN3-207ENST00000559494 CCDC82Q8N4S0 544 aa23.55■■□□□ 1.36
TSPAN3-207ENST00000559494 PIBF1Q8WXW3 757 aa23.55■■□□□ 1.36
TSPAN3-207ENST00000559494 DDX11Q96FC9 970 aa23.55■■□□□ 1.36
TSPAN3-207ENST00000559494 BACH2Q9BYV9 841 aa23.55■■□□□ 1.36
TSPAN3-207ENST00000559494 A1CFQ9NQ94 594 aaKnown RBP23.55■■□□□ 1.36
TSPAN3-207ENST00000559494 RBM28Q9NW13 759 aaKnown RBP23.55■■□□□ 1.36
TSPAN3-207ENST00000559494 PNMA6FA0A0J9YX94 578 aa23.54■■□□□ 1.36
TSPAN3-207ENST00000559494 NFIBO00712 420 aa23.54■■□□□ 1.36
TSPAN3-207ENST00000559494 ADD1P35611 737 aaKnown RBP23.54■■□□□ 1.36
TSPAN3-207ENST00000559494 TRIM32Q13049 653 aa23.54■■□□□ 1.36
TSPAN3-207ENST00000559494 ZNF333Q96JL9 665 aa23.54■■□□□ 1.36
TSPAN3-207ENST00000559494 BIN2Q9UBW5 565 aaPredicted RBP23.54■■□□□ 1.36
TSPAN3-207ENST00000559494 ZNF236Q9UL36 1845 aa23.54■■□□□ 1.36
TSPAN3-207ENST00000559494 KIAA0100Q14667 2235 aaKnown RBP23.53■■□□□ 1.36
TSPAN3-207ENST00000559494 IGHA2P01877 340 aa23.53■■□□□ 1.36
TSPAN3-207ENST00000559494 METAP2P50579 478 aaKnown RBP eCLIP23.53■■□□□ 1.36
TSPAN3-207ENST00000559494 NEK4P51957 841 aa23.53■■□□□ 1.36
TSPAN3-207ENST00000559494 FUT2Q10981 343 aa23.53■■□□□ 1.36
TSPAN3-207ENST00000559494 AMNQ9BXJ7 453 aa23.53■■□□□ 1.36
TSPAN3-207ENST00000559494 SLC5A4Q9NY91 659 aa23.53■■□□□ 1.36
TSPAN3-207ENST00000559494 ABCB11O95342 1321 aa23.52■■□□□ 1.36
TSPAN3-207ENST00000559494 HMGCRP04035 888 aa23.52■■□□□ 1.36
TSPAN3-207ENST00000559494 INHAP05111 366 aa23.52■■□□□ 1.36
TSPAN3-207ENST00000559494 PPP2R5BQ15173 497 aa23.52■■□□□ 1.36
TSPAN3-207ENST00000559494 NSMFQ6X4W1 530 aa23.52■■□□□ 1.36
TSPAN3-207ENST00000559494 TRMT44Q8IYL2 757 aaKnown RBP23.52■■□□□ 1.36
TSPAN3-207ENST00000559494 TBC1D5Q92609 795 aa23.52■■□□□ 1.36
TSPAN3-207ENST00000559494 RRP36Q96EU6 259 aaKnown RBP23.52■■□□□ 1.36
TSPAN3-207ENST00000559494 ZNF274Q96GC6 653 aaPredicted RBP23.52■■□□□ 1.36
TSPAN3-207ENST00000559494 MAML3Q96JK9 1138 aa23.52■■□□□ 1.36
TSPAN3-207ENST00000559494 CYP39A1Q9NYL5 469 aa23.52■■□□□ 1.36
TSPAN3-207ENST00000559494 DIS3Q9Y2L1 958 aaKnown RBP23.52■■□□□ 1.36
TSPAN3-207ENST00000559494 MYCP01106 439 aaPredicted RBP23.51■■□□□ 1.35
TSPAN3-207ENST00000559494 AK2P54819 239 aa23.51■■□□□ 1.35
TSPAN3-207ENST00000559494 CNTN2Q02246 1040 aa23.51■■□□□ 1.35
TSPAN3-207ENST00000559494 BAATQ14032 418 aaPredicted RBP23.51■■□□□ 1.35
TSPAN3-207ENST00000559494 MTFR1Q15390 333 aa23.51■■□□□ 1.35
TSPAN3-207ENST00000559494 PCDHA1Q9Y5I3 950 aa23.51■■□□□ 1.35
TSPAN3-207ENST00000559494 NID2Q14112 1375 aa23.5■■□□□ 1.35
TSPAN3-207ENST00000559494 hCG_1642624A0A1W2PR95 340 aa23.5■■□□□ 1.35
TSPAN3-207ENST00000559494 CCT2P78371 535 aaKnown RBP23.5■■□□□ 1.35
TSPAN3-207ENST00000559494 OLFML2BQ68BL8 750 aa23.5■■□□□ 1.35
TSPAN3-207ENST00000559494 FAM133AQ8N9E0 248 aa23.5■■□□□ 1.35
TSPAN3-207ENST00000559494 FGD4Q96M96 766 aa23.5■■□□□ 1.35
TSPAN3-207ENST00000559494 UPF2Q9HAU5 1272 aaKnown RBP23.5■■□□□ 1.35
TSPAN3-207ENST00000559494 MRPL11Q9Y3B7 192 aaKnown RBP23.5■■□□□ 1.35
TSPAN3-207ENST00000559494 PLXNA1Q9UIW2 1896 aa23.5■■□□□ 1.35
TSPAN3-207ENST00000559494 PFASO15067 1338 aa23.49■■□□□ 1.35
TSPAN3-207ENST00000559494 CNTNAP5Q8WYK1 1306 aa23.49■■□□□ 1.35
TSPAN3-207ENST00000559494 CCDC196A0A1B0GTZ2 297 aa23.49■■□□□ 1.35
TSPAN3-207ENST00000559494 CCDC85CA6NKD9 419 aa23.49■■□□□ 1.35
TSPAN3-207ENST00000559494 POTEB2H3BUK9 544 aa23.49■■□□□ 1.35
TSPAN3-207ENST00000559494 UBXN2AP68543 259 aa23.49■■□□□ 1.35
TSPAN3-207ENST00000559494 RGS22Q8NE09 1264 aa23.49■■□□□ 1.35
TSPAN3-207ENST00000559494 PURBQ96QR8 312 aaKnown RBP23.49■■□□□ 1.35
TSPAN3-207ENST00000559494 NCOA5Q9HCD5 579 aaKnown RBP23.49■■□□□ 1.35
TSPAN3-207ENST00000559494 TPCN1Q9ULQ1 816 aa23.49■■□□□ 1.35
TSPAN3-207ENST00000559494 V9GY48 417 aaPredicted RBP23.49■■□□□ 1.35
TSPAN3-207ENST00000559494 SOWAHBA6NEL2 793 aa23.48■■□□□ 1.35
TSPAN3-207ENST00000559494 OPLAHO14841 1288 aa23.48■■□□□ 1.35
TSPAN3-207ENST00000559494 CYP2C19P33261 490 aa23.48■■□□□ 1.35
TSPAN3-207ENST00000559494 CACNB2Q08289 660 aaPredicted RBP23.48■■□□□ 1.35
TSPAN3-207ENST00000559494 MAP3K21Q5TCX8 1036 aa23.48■■□□□ 1.35
TSPAN3-207ENST00000559494 RNF207Q6ZRF8 634 aa23.48■■□□□ 1.35
TSPAN3-207ENST00000559494 PTPDC1A2A3K4 754 aa23.47■■□□□ 1.35
TSPAN3-207ENST00000559494 RPS6P62753 249 aaKnown RBP23.47■■□□□ 1.35
TSPAN3-207ENST00000559494 STK3Q13188 491 aa23.47■■□□□ 1.35
TSPAN3-207ENST00000559494 ANKRD1Q15327 319 aa23.47■■□□□ 1.35
TSPAN3-207ENST00000559494 NTRK3Q16288 839 aa23.47■■□□□ 1.35
TSPAN3-207ENST00000559494 MFSD14CQ5VZR4 134 aa23.47■■□□□ 1.35
TSPAN3-207ENST00000559494 SLC30A10Q6XR72 485 aa23.47■■□□□ 1.35
TSPAN3-207ENST00000559494 TBC1D32Q96NH3 1257 aa23.47■■□□□ 1.35
TSPAN3-207ENST00000559494 UNC93B1Q9H1C4 597 aa23.47■■□□□ 1.35
TSPAN3-207ENST00000559494 SEC63Q9UGP8 760 aaKnown RBP23.47■■□□□ 1.35
TSPAN3-207ENST00000559494 CCL5P13501 91 aa23.46■■□□□ 1.35
TSPAN3-207ENST00000559494 PRKAR2AP13861 404 aaKnown RBP23.46■■□□□ 1.35
TSPAN3-207ENST00000559494 TRAF1Q13077 416 aa23.46■■□□□ 1.35
TSPAN3-207ENST00000559494 ZNF467Q7Z7K2 595 aaPredicted RBP23.46■■□□□ 1.35
TSPAN3-207ENST00000559494 TINF2Q9BSI4 451 aa23.46■■□□□ 1.35
TSPAN3-207ENST00000559494 ASTN1O14525 1302 aa23.45■■□□□ 1.35
TSPAN3-207ENST00000559494 CALML3P27482 149 aa23.45■■□□□ 1.34
TSPAN3-207ENST00000559494 PRAMEF19Q5SWL8 479 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms