RNA–Protein interactions for RNA: ENST00000559321.1

LINC02253-201, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 2 BASIC

Gene LINC02253, Length 448 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-201ENST00000559321 HOXC12P31275 282 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 GRIA2P42262 883 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 CTSOP43234 321 aaPredicted RBP3.41□□□□□ -1.86
LINC02253-201ENST00000559321 RXRGP48443 463 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 GTF2A2P52657 109 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 GFRA1P56159 465 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 FAM193AP78312 1265 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 ATP11AP98196 1134 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 SFSWAPQ12872 951 aaKnown RBP3.41□□□□□ -1.86
LINC02253-201ENST00000559321 CCDC96Q2M329 555 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 CCDC93Q567U6 631 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 INTS11Q5TA45 600 aaKnown RBP3.41□□□□□ -1.86
LINC02253-201ENST00000559321 MZT2BQ6NZ67 158 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 RSPO2Q6UXX9 243 aaPredicted RBP3.41□□□□□ -1.86
LINC02253-201ENST00000559321 BRINP3Q76B58 766 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 GIMAP8Q8ND71 665 aaPredicted RBP3.41□□□□□ -1.86
LINC02253-201ENST00000559321 GPBAR1Q8TDU6 330 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 POF1BQ8WVV4 589 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 GCC1Q96CN9 775 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 ACSBG1Q96GR2 724 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 SGCZQ96LD1 299 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 NAA15Q9BXJ9 866 aaKnown RBP3.41□□□□□ -1.86
LINC02253-201ENST00000559321 RNF38Q9H0F5 515 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.41□□□□□ -1.86
LINC02253-201ENST00000559321 UNC45AQ9H3U1 944 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 IFT122Q9HBG6 1241 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 CABP5Q9NP86 173 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 PRDM6Q9NQX0 595 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 SAMD15Q9P1V8 674 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 DDX20Q9UHI6 824 aaKnown RBP3.41□□□□□ -1.86
LINC02253-201ENST00000559321 NOL7Q9UMY1 257 aaKnown RBP3.41□□□□□ -1.86
LINC02253-201ENST00000559321 FAM50BQ9Y247 325 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 ZKSCAN5Q9Y2L8 839 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 EMC9Q9Y3B6 208 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 PCDHGC4Q9Y5F7 938 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 ITIH6Q6UXX5 1313 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 SYNGAP1Q96PV0 1343 aa3.41□□□□□ -1.86
LINC02253-201ENST00000559321 hCG_1642624A0A1W2PR95 340 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 ZNF891A8MT65 544 aaPredicted RBP3.4□□□□□ -1.87
LINC02253-201ENST00000559321 ARVCFO00192 962 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 CTNND1O60716 968 aaKnown RBP3.4□□□□□ -1.87
LINC02253-201ENST00000559321 IL33O95760 270 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 MT-CO1P00395 513 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 CYP11A1P05108 521 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 CDK8P49336 464 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 TNP2Q05952 138 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 IFIT5Q13325 482 aaKnown RBP3.4□□□□□ -1.87
LINC02253-201ENST00000559321 IKBKEQ14164 716 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 PCBP2Q15366 365 aaKnown RBP eCLIP3.4□□□□□ -1.87
LINC02253-201ENST00000559321 LONRF1Q17RB8 773 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 SLC4A8Q2Y0W8 1093 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 DGKKQ5KSL6 1271 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 ATAT1Q5SQI0 421 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 HP1BP3Q5SSJ5 553 aaPredicted RBP3.4□□□□□ -1.87
LINC02253-201ENST00000559321 FAM182BQ5T319 152 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 IFIT1BQ5T764 474 aaKnown RBP3.4□□□□□ -1.87
LINC02253-201ENST00000559321 TLDC1Q6P9B6 456 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 LIAT1Q6ZQX7 453 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 FAM43BQ6ZT52 329 aaPredicted RBP3.4□□□□□ -1.87
LINC02253-201ENST00000559321 PRICKLE2Q7Z3G6 844 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 RASSF3Q86WH2 238 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 MCATQ8IVS2 390 aaKnown RBP3.4□□□□□ -1.87
LINC02253-201ENST00000559321 MRPL41Q8IXM3 137 aaKnown RBP3.4□□□□□ -1.87
LINC02253-201ENST00000559321 TMEM192Q8IY95 271 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 KRT78Q8N1N4 520 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 ARHGEF39Q8N4T4 335 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 PANK1Q8TE04 598 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 DCAF4Q8WV16 495 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 CCT6BQ92526 530 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 WNT8BQ93098 351 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 ELMO3Q96BJ8 720 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 ACSF2Q96CM8 615 aaPredicted RBP3.4□□□□□ -1.87
LINC02253-201ENST00000559321 C1orf159Q96HA4 380 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 ZC3H10Q96K80 434 aaKnown RBP3.4□□□□□ -1.87
LINC02253-201ENST00000559321 CELF4Q9BZC1 486 aaKnown RBP3.4□□□□□ -1.87
LINC02253-201ENST00000559321 TMEM60Q9H2L4 133 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 CYP26B1Q9NR63 512 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 AAASQ9NRG9 546 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 SAGE1Q9NXZ1 904 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 PRR13Q9NZ81 148 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 MARK1Q9P0L2 795 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 PDP2Q9P2J9 529 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 B4GALT6Q9UBX8 382 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 KLHL3Q9UH77 587 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 EVLQ9UI08 416 aaPredicted RBP3.4□□□□□ -1.87
LINC02253-201ENST00000559321 ZNF652Q9Y2D9 606 aa3.4□□□□□ -1.87
LINC02253-201ENST00000559321 LRRFIP2Q9Y608 721 aaKnown RBP3.4□□□□□ -1.87
LINC02253-201ENST00000559321 KLHL33A6NCF5 533 aa3.39□□□□□ -1.87
LINC02253-201ENST00000559321 SPDYE3A6NKU9 549 aa3.39□□□□□ -1.87
LINC02253-201ENST00000559321 RASA4BC9J798 803 aa3.39□□□□□ -1.87
LINC02253-201ENST00000559321 RASA4O43374 803 aa3.39□□□□□ -1.87
LINC02253-201ENST00000559321 TBX1O43435 398 aa3.39□□□□□ -1.87
LINC02253-201ENST00000559321 CLEC3AO75596 197 aa3.39□□□□□ -1.87
LINC02253-201ENST00000559321 GLRX3O76003 335 aaKnown RBP3.39□□□□□ -1.87
LINC02253-201ENST00000559321 UBOX5O94941 541 aa3.39□□□□□ -1.87
LINC02253-201ENST00000559321 RHOBTB3O94955 611 aa3.39□□□□□ -1.87
LINC02253-201ENST00000559321 ZRANB2O95218 330 aaKnown RBP eCLIP3.39□□□□□ -1.87
LINC02253-201ENST00000559321 CNOT4O95628 575 aaKnown RBP3.39□□□□□ -1.87
LINC02253-201ENST00000559321 CRTAMO95727 393 aa3.39□□□□□ -1.87
LINC02253-201ENST00000559321 ITGA4P13612 1032 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms