RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 SEC63Q9UGP8 760 aaKnown RBP18.62■□□□□ 0.57
PBX1-215ENST00000559240 LCMT1Q9UIC8 334 aa18.62■□□□□ 0.57
PBX1-215ENST00000559240 CLEC11AQ9Y240 323 aa18.62■□□□□ 0.57
PBX1-215ENST00000559240 STXBP3O00186 592 aa18.61■□□□□ 0.57
PBX1-215ENST00000559240 CXCL11O14625 94 aa18.61■□□□□ 0.57
PBX1-215ENST00000559240 STAT2P52630 851 aa18.61■□□□□ 0.57
PBX1-215ENST00000559240 EMILIN3Q9NT22 766 aa18.61■□□□□ 0.57
PBX1-215ENST00000559240 MYPNQ86TC9 1320 aa18.61■□□□□ 0.57
PBX1-215ENST00000559240 PPIL2Q13356 520 aa18.61■□□□□ 0.57
PBX1-215ENST00000559240 KCTD1Q719H9 257 aa18.61■□□□□ 0.57
PBX1-215ENST00000559240 ZNF446Q9NWS9 450 aa18.61■□□□□ 0.57
PBX1-215ENST00000559240 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.61■□□□□ 0.57
PBX1-215ENST00000559240 PNMA2Q9UL42 364 aa18.61■□□□□ 0.57
PBX1-215ENST00000559240 NPY5RQ15761 445 aa18.6■□□□□ 0.57
PBX1-215ENST00000559240 MAP1SQ66K74 1059 aaPredicted RBP18.6■□□□□ 0.57
PBX1-215ENST00000559240 TTBK2Q6IQ55 1244 aa18.6■□□□□ 0.57
PBX1-215ENST00000559240 CCDC82Q8N4S0 544 aa18.6■□□□□ 0.57
PBX1-215ENST00000559240 RANBP17Q9H2T7 1088 aaKnown RBP18.6■□□□□ 0.57
PBX1-215ENST00000559240 UBE2Q2LH0YL09 131 aa18.6■□□□□ 0.57
PBX1-215ENST00000559240 ITGBL1O95965 494 aaPredicted RBP18.6■□□□□ 0.57
PBX1-215ENST00000559240 CYP2C19P33261 490 aa18.6■□□□□ 0.57
PBX1-215ENST00000559240 WWC2Q6AWC2 1192 aa18.6■□□□□ 0.57
PBX1-215ENST00000559240 TMEM87AQ8NBN3 555 aa18.6■□□□□ 0.57
PBX1-215ENST00000559240 PIGSQ96S52 555 aa18.6■□□□□ 0.57
PBX1-215ENST00000559240 ZMYND12Q9H0C1 365 aa18.6■□□□□ 0.57
PBX1-215ENST00000559240 CASQ1P31415 396 aa18.6■□□□□ 0.57
PBX1-215ENST00000559240 SAFBQ15424 915 aaKnown RBP eCLIP18.6■□□□□ 0.57
PBX1-215ENST00000559240 UBA5Q9GZZ9 404 aa18.6■□□□□ 0.57
PBX1-215ENST00000559240 ZHX2Q9Y6X8 837 aa18.6■□□□□ 0.57
PBX1-215ENST00000559240 TMEM232C9JQI7 657 aa18.59■□□□□ 0.57
PBX1-215ENST00000559240 MTMR2Q13614 643 aa18.59■□□□□ 0.57
PBX1-215ENST00000559240 FAM83BQ5T0W9 1011 aa18.59■□□□□ 0.57
PBX1-215ENST00000559240 NEK11Q8NG66 645 aa18.59■□□□□ 0.57
PBX1-215ENST00000559240 TNFRSF25Q93038 417 aa18.59■□□□□ 0.57
PBX1-215ENST00000559240 GLT8D2Q9H1C3 349 aa18.59■□□□□ 0.57
PBX1-215ENST00000559240 M0R2N6 131 aa18.59■□□□□ 0.57
PBX1-215ENST00000559240 DTNBO60941 627 aa18.59■□□□□ 0.57
PBX1-215ENST00000559240 SPP2Q13103 211 aa18.59■□□□□ 0.57
PBX1-215ENST00000559240 E2F4Q16254 413 aa18.59■□□□□ 0.57
PBX1-215ENST00000559240 LRSAM1Q6UWE0 723 aa18.59■□□□□ 0.57
PBX1-215ENST00000559240 DLK2Q6UY11 383 aa18.59■□□□□ 0.57
PBX1-215ENST00000559240 PROCA1Q8NCQ7 364 aaPredicted RBP18.59■□□□□ 0.57
PBX1-215ENST00000559240 MAF1Q9H063 256 aa18.59■□□□□ 0.57
PBX1-215ENST00000559240 PRR12Q9ULL5 1215 aa18.59■□□□□ 0.57
PBX1-215ENST00000559240 VCAM1P19320 739 aa18.58■□□□□ 0.57
PBX1-215ENST00000559240 SPTLC3Q9NUV7 552 aa18.58■□□□□ 0.57
PBX1-215ENST00000559240 A0A0G2JLL6 359 aaPredicted RBP18.58■□□□□ 0.56
PBX1-215ENST00000559240 MYO1CO00159 1063 aa18.58■□□□□ 0.56
PBX1-215ENST00000559240 PRPF40AO75400 957 aaKnown RBP18.58■□□□□ 0.56
PBX1-215ENST00000559240 PRRT2Q7Z6L0 340 aaPredicted RBP18.58■□□□□ 0.56
PBX1-215ENST00000559240 BRMS1Q9HCU9 246 aa18.58■□□□□ 0.56
PBX1-215ENST00000559240 LMBRD1Q9NUN5 540 aa18.58■□□□□ 0.56
PBX1-215ENST00000559240 VPS54Q9P1Q0 977 aa18.58■□□□□ 0.56
PBX1-215ENST00000559240 RBBP6Q7Z6E9 1792 aaKnown RBP18.57■□□□□ 0.56
PBX1-215ENST00000559240 KRT2P35908 639 aa18.57■□□□□ 0.56
PBX1-215ENST00000559240 CCDC84Q86UT8 332 aaPredicted RBP18.57■□□□□ 0.56
PBX1-215ENST00000559240 GPT2Q8TD30 523 aa18.57■□□□□ 0.56
PBX1-215ENST00000559240 NUP88Q99567 741 aaPredicted RBP18.57■□□□□ 0.56
PBX1-215ENST00000559240 PCDHA4Q9UN74 947 aa18.57■□□□□ 0.56
PBX1-215ENST00000559240 ADAMTS5Q9UNA0 930 aa18.57■□□□□ 0.56
PBX1-215ENST00000559240 FZD1Q9UP38 647 aa18.57■□□□□ 0.56
PBX1-215ENST00000559240 MTMR7Q9Y216 660 aa18.57■□□□□ 0.56
PBX1-215ENST00000559240 PPFIA3O75145 1194 aa18.57■□□□□ 0.56
PBX1-215ENST00000559240 MAP2K1Q02750 393 aaPredicted RBP18.57■□□□□ 0.56
PBX1-215ENST00000559240 CDC37Q16543 378 aaPredicted RBP18.57■□□□□ 0.56
PBX1-215ENST00000559240 TMEM63CQ9P1W3 806 aa18.57■□□□□ 0.56
PBX1-215ENST00000559240 SUFUQ9UMX1 484 aa18.57■□□□□ 0.56
PBX1-215ENST00000559240 QRICH1Q2TAL8 776 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 NBPF20Q3BBV1 942 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 MCTP2Q6DN12 878 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 NOSTRINQ8IVI9 506 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 DIS3L2Q8IYB7 885 aaKnown RBP18.56■□□□□ 0.56
PBX1-215ENST00000559240 PRPF38AQ8NAV1 312 aaKnown RBP18.56■□□□□ 0.56
PBX1-215ENST00000559240 CHAMP1Q96JM3 812 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 GBA2Q9HCG7 927 aaPredicted RBP18.56■□□□□ 0.56
PBX1-215ENST00000559240 JRKLQ9Y4A0 524 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 PASKQ96RG2 1323 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 PPP1R11O60927 126 aaPredicted RBP18.56■□□□□ 0.56
PBX1-215ENST00000559240 OTUD7BQ6GQQ9 843 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 BICD2Q8TD16 824 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 SLF1Q9BQI6 1058 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 CPVLQ9H3G5 476 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 GJB4Q9NTQ9 266 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 TMOD4Q9NZQ9 345 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 KIF28PB7ZC32 967 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 TRAF5O00463 557 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 GNA11P29992 359 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 SLC16A2P36021 539 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 TYW1BQ6NUM6 668 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 SPICE1Q8N0Z3 855 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 CEP120Q8N960 986 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 ZNF396Q96N95 335 aaPredicted RBP18.56■□□□□ 0.56
PBX1-215ENST00000559240 AMNQ9BXJ7 453 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 DONSONQ9NYP3 566 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 PPP1R9AQ9ULJ8 1098 aa18.56■□□□□ 0.56
PBX1-215ENST00000559240 ELP1O95163 1332 aa18.55■□□□□ 0.56
PBX1-215ENST00000559240 HOXA7P31268 230 aaPredicted RBP18.55■□□□□ 0.56
PBX1-215ENST00000559240 SAMD3Q8N6K7 520 aa18.55■□□□□ 0.56
PBX1-215ENST00000559240 OAZ1P54368 228 aa18.55■□□□□ 0.56
PBX1-215ENST00000559240 GHRHRQ02643 423 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms