RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 NTRK3Q16288 839 aa13.31□□□□□ -0.28
SNX1-204ENST00000559061 CHST13Q8NET6 341 aa13.31□□□□□ -0.28
SNX1-204ENST00000559061 TBC1D5Q92609 795 aa13.31□□□□□ -0.28
SNX1-204ENST00000559061 SHISA4Q96DD7 197 aa13.31□□□□□ -0.28
SNX1-204ENST00000559061 TRERF1Q96PN7 1200 aa13.31□□□□□ -0.28
SNX1-204ENST00000559061 MMP19Q99542 508 aa13.31□□□□□ -0.28
SNX1-204ENST00000559061 NUDT12Q9BQG2 462 aa13.31□□□□□ -0.28
SNX1-204ENST00000559061 C22orf23Q9BZE7 217 aa13.31□□□□□ -0.28
SNX1-204ENST00000559061 ALDH8A1Q9H2A2 487 aaPredicted RBP13.31□□□□□ -0.28
SNX1-204ENST00000559061 PDRG1Q9NUG6 133 aa13.31□□□□□ -0.28
SNX1-204ENST00000559061 TPCN1Q9ULQ1 816 aa13.31□□□□□ -0.28
SNX1-204ENST00000559061 hCG_1642624A0A1W2PR95 340 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 DTNBO60941 627 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 CALM1P0DP23 149 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 CALM2P0DP24 149 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 CALM3P0DP25 149 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 HOXD10P28358 340 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 GRK4P32298 578 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 COPB2P35606 906 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 ADD1P35611 737 aaKnown RBP13.3□□□□□ -0.28
SNX1-204ENST00000559061 RGS2P41220 211 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 SLC4A3P48751 1232 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 AK2P54819 239 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 MTFR1Q15390 333 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 RTN1Q16799 776 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 USH1GQ495M9 461 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 MAP3K21Q5TCX8 1036 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 SLC30A10Q6XR72 485 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 FAM133AQ8N9E0 248 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 TRPV1Q8NER1 839 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 CTCFLQ8NI51 663 aaPredicted RBP13.3□□□□□ -0.28
SNX1-204ENST00000559061 RAET1EQ8TD07 263 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 PXYLP1Q8TE99 480 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 TBC1D32Q96NH3 1257 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 ACAD9Q9H845 621 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 NCOA5Q9HCD5 579 aaKnown RBP13.3□□□□□ -0.28
SNX1-204ENST00000559061 COL20A1Q9P218 1284 aa13.3□□□□□ -0.28
SNX1-204ENST00000559061 SOWAHBA6NEL2 793 aa13.29□□□□□ -0.28
SNX1-204ENST00000559061 GOLGA8AA7E2F4 631 aa13.29□□□□□ -0.28
SNX1-204ENST00000559061 ZBTB5O15062 677 aa13.29□□□□□ -0.28
SNX1-204ENST00000559061 STRNO43815 780 aa13.29□□□□□ -0.28
SNX1-204ENST00000559061 INHAP05111 366 aa13.29□□□□□ -0.28
SNX1-204ENST00000559061 FCER1AP12319 257 aa13.29□□□□□ -0.28
SNX1-204ENST00000559061 SMARCA1P28370 1054 aa13.29□□□□□ -0.28
SNX1-204ENST00000559061 CNTN2Q02246 1040 aa13.29□□□□□ -0.28
SNX1-204ENST00000559061 ARHGEF6Q15052 776 aa13.29□□□□□ -0.28
SNX1-204ENST00000559061 TKFCQ3LXA3 575 aa13.29□□□□□ -0.28
SNX1-204ENST00000559061 TYW1BQ6NUM6 668 aa13.29□□□□□ -0.28
SNX1-204ENST00000559061 HOMER1Q86YM7 354 aa13.29□□□□□ -0.28
SNX1-204ENST00000559061 SLAIN1Q8ND83 568 aa13.29□□□□□ -0.28
SNX1-204ENST00000559061 PIBF1Q8WXW3 757 aa13.29□□□□□ -0.28
SNX1-204ENST00000559061 MAML3Q96JK9 1138 aa13.29□□□□□ -0.28
SNX1-204ENST00000559061 CYP39A1Q9NYL5 469 aa13.29□□□□□ -0.28
SNX1-204ENST00000559061 ADAMTS3O15072 1205 aa13.28□□□□□ -0.28
SNX1-204ENST00000559061 CD2BP2O95400 341 aaKnown RBP13.28□□□□□ -0.28
SNX1-204ENST00000559061 KIF5BP33176 963 aa13.28□□□□□ -0.28
SNX1-204ENST00000559061 GHRHRQ02643 423 aa13.28□□□□□ -0.28
SNX1-204ENST00000559061 SLC9C1Q4G0N8 1177 aa13.28□□□□□ -0.28
SNX1-204ENST00000559061 FBXO11Q86XK2 927 aa13.28□□□□□ -0.28
SNX1-204ENST00000559061 CCDC82Q8N4S0 544 aa13.28□□□□□ -0.28
SNX1-204ENST00000559061 KATNBL1Q9H079 304 aa13.28□□□□□ -0.28
SNX1-204ENST00000559061 IVNS1ABPQ9Y6Y0 642 aa13.28□□□□□ -0.28
SNX1-204ENST00000559061 MKI67P46013 3256 aaKnown RBP13.27□□□□□ -0.28
SNX1-204ENST00000559061 PNMA6FA0A0J9YX94 578 aa13.27□□□□□ -0.29
SNX1-204ENST00000559061 DHX16O60231 1041 aaKnown RBP13.27□□□□□ -0.29
SNX1-204ENST00000559061 PPFIA3O75145 1194 aa13.27□□□□□ -0.29
SNX1-204ENST00000559061 CTDNEP1O95476 244 aa13.27□□□□□ -0.29
SNX1-204ENST00000559061 HMGCRP04035 888 aa13.27□□□□□ -0.29
SNX1-204ENST00000559061 CYP2C19P33261 490 aa13.27□□□□□ -0.29
SNX1-204ENST00000559061 METAP2P50579 478 aaKnown RBP eCLIP13.27□□□□□ -0.29
SNX1-204ENST00000559061 CCT2P78371 535 aaKnown RBP13.27□□□□□ -0.29
SNX1-204ENST00000559061 CACNB2Q08289 660 aaPredicted RBP13.27□□□□□ -0.29
SNX1-204ENST00000559061 SCRN1Q12765 414 aa13.27□□□□□ -0.29
SNX1-204ENST00000559061 BAATQ14032 418 aaPredicted RBP13.27□□□□□ -0.29
SNX1-204ENST00000559061 KCTD2Q14681 263 aa13.27□□□□□ -0.29
SNX1-204ENST00000559061 PKN1Q16512 942 aa13.27□□□□□ -0.29
SNX1-204ENST00000559061 ME3Q16798 604 aa13.27□□□□□ -0.29
SNX1-204ENST00000559061 OLFML2BQ68BL8 750 aa13.27□□□□□ -0.29
SNX1-204ENST00000559061 CCAR1Q8IX12 1150 aaKnown RBP13.27□□□□□ -0.29
SNX1-204ENST00000559061 ZNF274Q96GC6 653 aaPredicted RBP13.27□□□□□ -0.29
SNX1-204ENST00000559061 LZTS2Q9BRK4 669 aa13.27□□□□□ -0.29
SNX1-204ENST00000559061 UNC93B1Q9H1C4 597 aa13.27□□□□□ -0.29
SNX1-204ENST00000559061 RBM28Q9NW13 759 aaKnown RBP13.27□□□□□ -0.29
SNX1-204ENST00000559061 FBXO40Q9UH90 709 aa13.27□□□□□ -0.29
SNX1-204ENST00000559061 CTDP1Q9Y5B0 961 aaPredicted RBP13.27□□□□□ -0.29
SNX1-204ENST00000559061 ABCB11O95342 1321 aa13.27□□□□□ -0.29
SNX1-204ENST00000559061 POTEFA5A3E0 1075 aa13.26□□□□□ -0.29
SNX1-204ENST00000559061 SNAI1O95863 264 aaPredicted RBP13.26□□□□□ -0.29
SNX1-204ENST00000559061 MYCP01106 439 aaPredicted RBP13.26□□□□□ -0.29
SNX1-204ENST00000559061 CYBAP13498 195 aa13.26□□□□□ -0.29
SNX1-204ENST00000559061 CCND3P30281 292 aaPredicted RBP13.26□□□□□ -0.29
SNX1-204ENST00000559061 GNAQP50148 359 aa13.26□□□□□ -0.29
SNX1-204ENST00000559061 NEK4P51957 841 aa13.26□□□□□ -0.29
SNX1-204ENST00000559061 RPS6P62753 249 aaKnown RBP13.26□□□□□ -0.29
SNX1-204ENST00000559061 WWC2Q6AWC2 1192 aa13.26□□□□□ -0.29
SNX1-204ENST00000559061 NSMFQ6X4W1 530 aa13.26□□□□□ -0.29
SNX1-204ENST00000559061 GPKOWQ92917 476 aaPredicted RBP eCLIP13.26□□□□□ -0.29
SNX1-204ENST00000559061 AMNQ9BXJ7 453 aa13.26□□□□□ -0.29
SNX1-204ENST00000559061 DIS3Q9Y2L1 958 aaKnown RBP13.26□□□□□ -0.29
SNX1-204ENST00000559061 PFASO15067 1338 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms