RNA–Protein interactions for RNA: ENST00000558953.1

MARK3-216, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-216ENST00000558953 SAP30BPQ9UHR5 308 aaKnown RBP7.44□□□□□ -1.22
MARK3-216ENST00000558953 RCAN3Q9UKA8 241 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 ZBTB21Q9ULJ3 1066 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 GABRQQ9UN88 632 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 COG6Q9Y2V7 657 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 NDUFB9Q9Y6M9 179 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 HTTP42858 3142 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 SCO2A0A1W2PP80 73 aa7.43□□□□□ -1.22
MARK3-216ENST00000558953 APBB1O00213 710 aa7.43□□□□□ -1.22
MARK3-216ENST00000558953 LILRB3O75022 631 aa7.43□□□□□ -1.22
MARK3-216ENST00000558953 ADH1AP07327 375 aa7.43□□□□□ -1.22
MARK3-216ENST00000558953 IFIT2P09913 472 aaKnown RBP7.43□□□□□ -1.22
MARK3-216ENST00000558953 CAPN2P17655 700 aa7.43□□□□□ -1.22
MARK3-216ENST00000558953 HOXA7P31268 230 aaPredicted RBP7.43□□□□□ -1.22
MARK3-216ENST00000558953 PTGIRP43119 386 aa7.43□□□□□ -1.22
MARK3-216ENST00000558953 GJA8P48165 433 aa7.43□□□□□ -1.22
MARK3-216ENST00000558953 IRX3P78415 501 aaPredicted RBP7.43□□□□□ -1.22
MARK3-216ENST00000558953 JAG1P78504 1218 aa7.43□□□□□ -1.22
MARK3-216ENST00000558953 PPP2R2DQ66LE6 453 aa7.43□□□□□ -1.22
MARK3-216ENST00000558953 RNF208Q9H0X6 261 aa7.43□□□□□ -1.22
MARK3-216ENST00000558953 EHD4Q9H223 541 aa7.43□□□□□ -1.22
MARK3-216ENST00000558953 DNAJC18Q9H819 358 aa7.43□□□□□ -1.22
MARK3-216ENST00000558953 MORF4L1Q9UBU8 362 aa7.43□□□□□ -1.22
MARK3-216ENST00000558953 SERPINB13Q9UIV8 391 aa7.43□□□□□ -1.22
MARK3-216ENST00000558953 NAV1Q8NEY1 1877 aa7.43□□□□□ -1.22
MARK3-216ENST00000558953 GOLIM4O00461 696 aa7.42□□□□□ -1.22
MARK3-216ENST00000558953 INHAP05111 366 aa7.42□□□□□ -1.22
MARK3-216ENST00000558953 NEFLP07196 543 aa7.42□□□□□ -1.22
MARK3-216ENST00000558953 ELNP15502 786 aa7.42□□□□□ -1.22
MARK3-216ENST00000558953 PDE6AP16499 860 aa7.42□□□□□ -1.22
MARK3-216ENST00000558953 RFC5P40937 340 aa7.42□□□□□ -1.22
MARK3-216ENST00000558953 MAP2K3P46734 347 aa7.42□□□□□ -1.22
MARK3-216ENST00000558953 PDE3AQ14432 1141 aa7.42□□□□□ -1.22
MARK3-216ENST00000558953 SLC9C2Q5TAH2 1124 aa7.42□□□□□ -1.22
MARK3-216ENST00000558953 TATDN1Q6P1N9 297 aa7.42□□□□□ -1.22
MARK3-216ENST00000558953 USP17L2Q6R6M4 530 aa7.42□□□□□ -1.22
MARK3-216ENST00000558953 KRTAP19-1Q8IUB9 90 aa7.42□□□□□ -1.22
MARK3-216ENST00000558953 SIRT2Q8IXJ6 389 aa7.42□□□□□ -1.22
MARK3-216ENST00000558953 U2AF1L4Q8WU68 220 aaKnown RBP7.42□□□□□ -1.22
MARK3-216ENST00000558953 GTF3C2Q8WUA4 911 aaPredicted RBP7.42□□□□□ -1.22
MARK3-216ENST00000558953 SHISA4Q96DD7 197 aa7.42□□□□□ -1.22
MARK3-216ENST00000558953 P2RX7Q99572 595 aaKnown RBP7.42□□□□□ -1.22
MARK3-216ENST00000558953 RIOK1Q9BRS2 568 aaKnown RBP7.42□□□□□ -1.22
MARK3-216ENST00000558953 CRNKL1Q9BZJ0 848 aaKnown RBP7.42□□□□□ -1.22
MARK3-216ENST00000558953 MYH7P12883 1935 aa7.42□□□□□ -1.22
MARK3-216ENST00000558953 MYH8P13535 1937 aa7.42□□□□□ -1.22
MARK3-216ENST00000558953 DDX60LQ5H9U9 1706 aaKnown RBP7.41□□□□□ -1.22
MARK3-216ENST00000558953 SGPL1O95470 568 aa7.41□□□□□ -1.22
MARK3-216ENST00000558953 GH2P01242 217 aa7.41□□□□□ -1.22
MARK3-216ENST00000558953 POLR3DP05423 398 aaPredicted RBP7.41□□□□□ -1.22
MARK3-216ENST00000558953 RNF144AP50876 292 aaPredicted RBP7.41□□□□□ -1.22
MARK3-216ENST00000558953 USP14P54578 494 aa7.41□□□□□ -1.22
MARK3-216ENST00000558953 HERVK_113P62684 666 aa7.41□□□□□ -1.22
MARK3-216ENST00000558953 MCM6Q14566 821 aa7.41□□□□□ -1.22
MARK3-216ENST00000558953 ABCB5Q2M3G0 1257 aa7.41□□□□□ -1.22
MARK3-216ENST00000558953 SHROOM1Q2M3G4 852 aaPredicted RBP7.41□□□□□ -1.22
MARK3-216ENST00000558953 CERKLQ49MI3 558 aaPredicted RBP7.41□□□□□ -1.22
MARK3-216ENST00000558953 GPRC5AQ8NFJ5 357 aa7.41□□□□□ -1.22
MARK3-216ENST00000558953 C12orf42Q96LP6 360 aa7.41□□□□□ -1.22
MARK3-216ENST00000558953 DNAJC2Q99543 621 aaKnown RBP7.41□□□□□ -1.22
MARK3-216ENST00000558953 FEZ1Q99689 392 aa7.41□□□□□ -1.22
MARK3-216ENST00000558953 ARHGAP9Q9BRR9 750 aa7.41□□□□□ -1.22
MARK3-216ENST00000558953 HTATIP2Q9BUP3 242 aa7.41□□□□□ -1.22
MARK3-216ENST00000558953 BCL11AQ9H165 835 aa7.41□□□□□ -1.22
MARK3-216ENST00000558953 SUV39H2Q9H5I1 410 aa7.41□□□□□ -1.22
MARK3-216ENST00000558953 CABP5Q9NP86 173 aa7.41□□□□□ -1.22
MARK3-216ENST00000558953 ZNF532Q9HCE3 1301 aa7.41□□□□□ -1.22
MARK3-216ENST00000558953 PLXNB2O15031 1838 aa7.41□□□□□ -1.22
MARK3-216ENST00000558953 TRIOBPQ9H2D6 2365 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 USP17L15C9J2P7 530 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 USP17L13C9JLJ4 530 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 USP17L11C9JVI0 530 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 USP17L18D6R9N7 530 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 USP17L22D6RA61 530 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 USP17L17D6RBQ6 530 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 USP17L19D6RCP7 530 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 USP17L20D6RJB6 530 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 FARP2O94887 1054 aaPredicted RBP7.4□□□□□ -1.22
MARK3-216ENST00000558953 TFRCP02786 760 aaKnown RBP7.4□□□□□ -1.22
MARK3-216ENST00000558953 HMGCRP04035 888 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 ATP5JP18859 108 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 MAPK4P31152 587 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 SHMT1P34896 483 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 PLCD1P51178 756 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 USP17L24Q0WX57 530 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 DOC2BQ14184 412 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 RAB3GAP1Q15042 981 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 HABP4Q5JVS0 413 aaKnown RBP7.4□□□□□ -1.22
MARK3-216ENST00000558953 LINC00114Q6XXX2 140 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 UBE2Q1Q7Z7E8 422 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 CCAR1Q8IX12 1150 aaKnown RBP7.4□□□□□ -1.22
MARK3-216ENST00000558953 KDF1Q8NAX2 398 aaPredicted RBP7.4□□□□□ -1.22
MARK3-216ENST00000558953 DPF3Q92784 378 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 DEFB118Q96PH6 123 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 LRRCC1Q9C099 1032 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.4□□□□□ -1.22
MARK3-216ENST00000558953 KIAA1683Q9H0B3 1180 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 PAK6Q9NQU5 681 aaPredicted RBP7.4□□□□□ -1.22
MARK3-216ENST00000558953 PAG1Q9NWQ8 432 aa7.4□□□□□ -1.22
MARK3-216ENST00000558953 MCM9Q9NXL9 1143 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms