RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 FAM133AQ8N9E0 248 aa18.22■□□□□ 0.51
CPNE6-208ENST00000558795 ASB2Q96Q27 587 aa18.22■□□□□ 0.51
CPNE6-208ENST00000558795 NKX2-4Q9H2Z4 354 aa18.22■□□□□ 0.51
CPNE6-208ENST00000558795 RNF146Q9NTX7 359 aa18.22■□□□□ 0.51
CPNE6-208ENST00000558795 GBF1Q92538 1859 aa18.22■□□□□ 0.51
CPNE6-208ENST00000558795 ZFYP08048 801 aaPredicted RBP18.21■□□□□ 0.51
CPNE6-208ENST00000558795 MRPS5P82675 430 aaKnown RBP18.21■□□□□ 0.51
CPNE6-208ENST00000558795 PDE4BQ07343 736 aa18.21■□□□□ 0.51
CPNE6-208ENST00000558795 ITGA7Q13683 1181 aa18.21■□□□□ 0.51
CPNE6-208ENST00000558795 FSCN1Q16658 493 aaKnown RBP18.21■□□□□ 0.51
CPNE6-208ENST00000558795 OTOP2Q7RTS6 562 aa18.21■□□□□ 0.51
CPNE6-208ENST00000558795 FAM160B2Q86V87 743 aa18.21■□□□□ 0.51
CPNE6-208ENST00000558795 SLC43A3Q8NBI5 491 aa18.21■□□□□ 0.51
CPNE6-208ENST00000558795 CHURC1Q8WUH1 139 aa18.21■□□□□ 0.51
CPNE6-208ENST00000558795 NACAP1Q9BZK3 213 aa18.21■□□□□ 0.51
CPNE6-208ENST00000558795 A1CFQ9NQ94 594 aaKnown RBP18.21■□□□□ 0.51
CPNE6-208ENST00000558795 CXXC1Q9P0U4 656 aaPredicted RBP18.21■□□□□ 0.51
CPNE6-208ENST00000558795 PLIN4Q96Q06 1357 aa18.2■□□□□ 0.5
CPNE6-208ENST00000558795 SLC3A2P08195 630 aaKnown RBP18.2■□□□□ 0.5
CPNE6-208ENST00000558795 ADGRE1Q14246 886 aa18.2■□□□□ 0.5
CPNE6-208ENST00000558795 LRRFIP1Q32MZ4 808 aaKnown RBP18.2■□□□□ 0.5
CPNE6-208ENST00000558795 TKFCQ3LXA3 575 aa18.2■□□□□ 0.5
CPNE6-208ENST00000558795 NEDD1Q8NHV4 660 aa18.2■□□□□ 0.5
CPNE6-208ENST00000558795 ADAMTS19Q8TE59 1207 aa18.2■□□□□ 0.5
CPNE6-208ENST00000558795 AGBL1Q96MI9 1066 aa18.2■□□□□ 0.5
CPNE6-208ENST00000558795 TRERF1Q96PN7 1200 aa18.2■□□□□ 0.5
CPNE6-208ENST00000558795 SEZ6LQ9BYH1 1024 aa18.2■□□□□ 0.5
CPNE6-208ENST00000558795 GNEQ9Y223 722 aaKnown RBP18.2■□□□□ 0.5
CPNE6-208ENST00000558795 ASTN1O14525 1302 aa18.2■□□□□ 0.5
CPNE6-208ENST00000558795 SOWAHBA6NEL2 793 aa18.19■□□□□ 0.5
CPNE6-208ENST00000558795 LRRC37A2A6NM11 1700 aa18.19■□□□□ 0.5
CPNE6-208ENST00000558795 PATL2C9JE40 543 aaKnown RBP18.19■□□□□ 0.5
CPNE6-208ENST00000558795 M0R2C6 588 aa18.19■□□□□ 0.5
CPNE6-208ENST00000558795 DYNC1LI2O43237 492 aaPredicted RBP18.19■□□□□ 0.5
CPNE6-208ENST00000558795 ALAS1P13196 640 aa18.19■□□□□ 0.5
CPNE6-208ENST00000558795 SLC1A4P43007 532 aa18.19■□□□□ 0.5
CPNE6-208ENST00000558795 CCL23P55773 120 aa18.19■□□□□ 0.5
CPNE6-208ENST00000558795 RPUSD2Q8IZ73 545 aaKnown RBP18.19■□□□□ 0.5
CPNE6-208ENST00000558795 IFNL3Q8IZI9 196 aa18.19■□□□□ 0.5
CPNE6-208ENST00000558795 STAG1Q8WVM7 1258 aa18.19■□□□□ 0.5
CPNE6-208ENST00000558795 CHMP4CQ96CF2 233 aa18.19■□□□□ 0.5
CPNE6-208ENST00000558795 GMCL1Q96IK5 515 aa18.19■□□□□ 0.5
CPNE6-208ENST00000558795 TSPYL2Q9H2G4 693 aaPredicted RBP18.19■□□□□ 0.5
CPNE6-208ENST00000558795 UMODL1Q5DID0 1318 aa18.19■□□□□ 0.5
CPNE6-208ENST00000558795 SMPD1P17405 629 aa18.18■□□□□ 0.5
CPNE6-208ENST00000558795 TFAP4Q01664 338 aa18.18■□□□□ 0.5
CPNE6-208ENST00000558795 PPP4R3BQ5MIZ7 849 aa18.18■□□□□ 0.5
CPNE6-208ENST00000558795 IQSEC1Q6DN90 963 aa18.18■□□□□ 0.5
CPNE6-208ENST00000558795 UHRF1Q96T88 793 aaPredicted RBP18.18■□□□□ 0.5
CPNE6-208ENST00000558795 NOC4LQ9BVI4 516 aaKnown RBP18.18■□□□□ 0.5
CPNE6-208ENST00000558795 TRPV6Q9H1D0 765 aa18.18■□□□□ 0.5
CPNE6-208ENST00000558795 YBX2Q9Y2T7 364 aaKnown RBP18.18■□□□□ 0.5
CPNE6-208ENST00000558795 SLC4A7Q9Y6M7 1214 aa18.18■□□□□ 0.5
CPNE6-208ENST00000558795 ZNF536O15090 1300 aa18.18■□□□□ 0.5
CPNE6-208ENST00000558795 MCCP23508 829 aa18.17■□□□□ 0.5
CPNE6-208ENST00000558795 TSHZ3Q63HK5 1081 aa18.17■□□□□ 0.5
CPNE6-208ENST00000558795 PPP2R2DQ66LE6 453 aa18.17■□□□□ 0.5
CPNE6-208ENST00000558795 EEPD1Q7L9B9 569 aa18.17■□□□□ 0.5
CPNE6-208ENST00000558795 FBXO16Q8IX29 292 aaPredicted RBP18.17■□□□□ 0.5
CPNE6-208ENST00000558795 NAPBQ9H115 298 aa18.17■□□□□ 0.5
CPNE6-208ENST00000558795 Q9Y3F1 56 aa18.17■□□□□ 0.5
CPNE6-208ENST00000558795 ZBBXA8MT70 800 aa18.16■□□□□ 0.5
CPNE6-208ENST00000558795 B4GALT4O60513 344 aa18.16■□□□□ 0.5
CPNE6-208ENST00000558795 PSMC6P62333 389 aa18.16■□□□□ 0.5
CPNE6-208ENST00000558795 KCTD1Q719H9 257 aa18.16■□□□□ 0.5
CPNE6-208ENST00000558795 PDGFCQ9NRA1 345 aa18.16■□□□□ 0.5
CPNE6-208ENST00000558795 STX8Q9UNK0 236 aa18.16■□□□□ 0.5
CPNE6-208ENST00000558795 GRIN2DO15399 1336 aa18.16■□□□□ 0.5
CPNE6-208ENST00000558795 PLA2G6O60733 806 aa18.15■□□□□ 0.5
CPNE6-208ENST00000558795 PTGS1P23219 599 aa18.15■□□□□ 0.5
CPNE6-208ENST00000558795 RABGGTBP53611 331 aa18.15■□□□□ 0.5
CPNE6-208ENST00000558795 PPARAQ07869 468 aa18.15■□□□□ 0.5
CPNE6-208ENST00000558795 NSMFQ6X4W1 530 aa18.15■□□□□ 0.5
CPNE6-208ENST00000558795 KIAA1211Q6ZU35 1233 aa18.15■□□□□ 0.5
CPNE6-208ENST00000558795 MICALL1Q8N3F8 863 aa18.15■□□□□ 0.5
CPNE6-208ENST00000558795 WNT8AQ9H1J5 351 aa18.15■□□□□ 0.5
CPNE6-208ENST00000558795 VTA1Q9NP79 307 aa18.15■□□□□ 0.5
CPNE6-208ENST00000558795 CYP39A1Q9NYL5 469 aa18.15■□□□□ 0.5
CPNE6-208ENST00000558795 CCPG1Q9ULG6 757 aa18.15■□□□□ 0.5
CPNE6-208ENST00000558795 PCDHA11Q9Y5I1 949 aa18.15■□□□□ 0.5
CPNE6-208ENST00000558795 DDX49Q9Y6V7 483 aaKnown RBP18.15■□□□□ 0.5
CPNE6-208ENST00000558795 TSPY2A6NKD2 308 aa18.14■□□□□ 0.49
CPNE6-208ENST00000558795 SUPT20HL2P0C7V6 817 aa18.14■□□□□ 0.49
CPNE6-208ENST00000558795 SNAP25P60880 206 aa18.14■□□□□ 0.49
CPNE6-208ENST00000558795 MUM1L1Q5H9M0 696 aa18.14■□□□□ 0.49
CPNE6-208ENST00000558795 RCSD1Q6JBY9 416 aa18.14■□□□□ 0.49
CPNE6-208ENST00000558795 TAPT1Q6NXT6 567 aa18.14■□□□□ 0.49
CPNE6-208ENST00000558795 SCLYQ96I15 445 aa18.14■□□□□ 0.49
CPNE6-208ENST00000558795 PRR12Q9ULL5 1215 aa18.14■□□□□ 0.49
CPNE6-208ENST00000558795 PCDHB15Q9Y5E8 787 aa18.14■□□□□ 0.49
CPNE6-208ENST00000558795 PFKMP08237 780 aa18.13■□□□□ 0.49
CPNE6-208ENST00000558795 MYOGP15173 224 aa18.13■□□□□ 0.49
CPNE6-208ENST00000558795 ATP2A2P16615 1042 aaKnown RBP18.13■□□□□ 0.49
CPNE6-208ENST00000558795 ERICH6BQ5W0A0 696 aa18.13■□□□□ 0.49
CPNE6-208ENST00000558795 SEC62Q99442 399 aaKnown RBP18.13■□□□□ 0.49
CPNE6-208ENST00000558795 ALDH8A1Q9H2A2 487 aaPredicted RBP18.13■□□□□ 0.49
CPNE6-208ENST00000558795 POLR3EQ9NVU0 708 aa18.13■□□□□ 0.49
CPNE6-208ENST00000558795 ADD3Q9UEY8 706 aaKnown RBP18.13■□□□□ 0.49
CPNE6-208ENST00000558795 MTMR7Q9Y216 660 aa18.13■□□□□ 0.49
CPNE6-208ENST00000558795 NCOR1O75376 2440 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms