RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 SRRDQ9UH36 339 aa20.21■□□□□ 0.83
TPM1-214ENST00000558544 PNMA2Q9UL42 364 aa20.21■□□□□ 0.83
TPM1-214ENST00000558544 PPFIA3O75145 1194 aa20.2■□□□□ 0.82
TPM1-214ENST00000558544 HOXD10P28358 340 aa20.2■□□□□ 0.82
TPM1-214ENST00000558544 GRB14Q14449 540 aa20.2■□□□□ 0.82
TPM1-214ENST00000558544 NTRK3Q16288 839 aa20.2■□□□□ 0.82
TPM1-214ENST00000558544 NECAB1Q8N987 351 aa20.2■□□□□ 0.82
TPM1-214ENST00000558544 PHKBQ93100 1093 aa20.2■□□□□ 0.82
TPM1-214ENST00000558544 TSHZ2Q9NRE2 1034 aa20.2■□□□□ 0.82
TPM1-214ENST00000558544 FBXO40Q9UH90 709 aa20.2■□□□□ 0.82
TPM1-214ENST00000558544 LIMCH1Q9UPQ0 1083 aa20.2■□□□□ 0.82
TPM1-214ENST00000558544 ABCB11O95342 1321 aa20.19■□□□□ 0.82
TPM1-214ENST00000558544 CENPFP49454 3210 aa20.19■□□□□ 0.82
TPM1-214ENST00000558544 SLC15A5A6NIM6 579 aa20.19■□□□□ 0.82
TPM1-214ENST00000558544 CPLX1O14810 134 aa20.19■□□□□ 0.82
TPM1-214ENST00000558544 CD2BP2O95400 341 aaKnown RBP20.19■□□□□ 0.82
TPM1-214ENST00000558544 FCER1AP12319 257 aa20.19■□□□□ 0.82
TPM1-214ENST00000558544 FLT3LGP49771 235 aa20.19■□□□□ 0.82
TPM1-214ENST00000558544 KCTD2Q14681 263 aa20.19■□□□□ 0.82
TPM1-214ENST00000558544 MORN1Q5T089 497 aa20.19■□□□□ 0.82
TPM1-214ENST00000558544 SOCS4Q8WXH5 440 aa20.19■□□□□ 0.82
TPM1-214ENST00000558544 GTF3C6Q969F1 213 aa20.19■□□□□ 0.82
TPM1-214ENST00000558544 NUDT12Q9BQG2 462 aa20.19■□□□□ 0.82
TPM1-214ENST00000558544 GJD2Q9UKL4 321 aa20.19■□□□□ 0.82
TPM1-214ENST00000558544 NFIBO00712 420 aa20.18■□□□□ 0.82
TPM1-214ENST00000558544 STRNO43815 780 aa20.18■□□□□ 0.82
TPM1-214ENST00000558544 IFNAR1P17181 557 aa20.18■□□□□ 0.82
TPM1-214ENST00000558544 ADORA2AP29274 412 aa20.18■□□□□ 0.82
TPM1-214ENST00000558544 CLEC4DQ8WXI8 215 aa20.18■□□□□ 0.82
TPM1-214ENST00000558544 PCDHA1Q9Y5I3 950 aa20.18■□□□□ 0.82
TPM1-214ENST00000558544 V9GY48 417 aaPredicted RBP20.18■□□□□ 0.82
TPM1-214ENST00000558544 MCM3APO60318 1980 aa20.17■□□□□ 0.82
TPM1-214ENST00000558544 MAP2K5Q13163 448 aa20.17■□□□□ 0.82
TPM1-214ENST00000558544 CPLX2Q6PUV4 134 aaKnown RBP20.17■□□□□ 0.82
TPM1-214ENST00000558544 NSMFQ6X4W1 530 aa20.17■□□□□ 0.82
TPM1-214ENST00000558544 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.17■□□□□ 0.82
TPM1-214ENST00000558544 ABRAQ8N0Z2 381 aa20.17■□□□□ 0.82
TPM1-214ENST00000558544 ANKRD35Q8N283 1001 aa20.17■□□□□ 0.82
TPM1-214ENST00000558544 IL27Q8NEV9 243 aa20.17■□□□□ 0.82
TPM1-214ENST00000558544 GPKOWQ92917 476 aaPredicted RBP eCLIP20.17■□□□□ 0.82
TPM1-214ENST00000558544 SLC26A6Q9BXS9 759 aa20.17■□□□□ 0.82
TPM1-214ENST00000558544 A1CFQ9NQ94 594 aaKnown RBP20.17■□□□□ 0.82
TPM1-214ENST00000558544 PTPN22Q9Y2R2 807 aa20.17■□□□□ 0.82
TPM1-214ENST00000558544 PTCH2Q9Y6C5 1203 aa20.17■□□□□ 0.82
TPM1-214ENST00000558544 PGK2P07205 417 aa20.16■□□□□ 0.82
TPM1-214ENST00000558544 CYP2B6P20813 491 aa20.16■□□□□ 0.82
TPM1-214ENST00000558544 RGS2P41220 211 aa20.16■□□□□ 0.82
TPM1-214ENST00000558544 PRMT2P55345 433 aa20.16■□□□□ 0.82
TPM1-214ENST00000558544 ST3GAL1Q11201 340 aa20.16■□□□□ 0.82
TPM1-214ENST00000558544 RAET1EQ8TD07 263 aa20.16■□□□□ 0.82
TPM1-214ENST00000558544 USP6NLQ92738 828 aa20.16■□□□□ 0.82
TPM1-214ENST00000558544 RNF26Q9BY78 433 aaPredicted RBP20.16■□□□□ 0.82
TPM1-214ENST00000558544 MRPL11Q9Y3B7 192 aaKnown RBP20.16■□□□□ 0.82
TPM1-214ENST00000558544 PRPF3O43395 683 aaKnown RBP20.15■□□□□ 0.82
TPM1-214ENST00000558544 DTNBO60941 627 aa20.15■□□□□ 0.82
TPM1-214ENST00000558544 AKAP17AQ02040 695 aaKnown RBP20.15■□□□□ 0.82
TPM1-214ENST00000558544 TRAF1Q13077 416 aa20.15■□□□□ 0.82
TPM1-214ENST00000558544 WWC2Q6AWC2 1192 aa20.15■□□□□ 0.82
TPM1-214ENST00000558544 HEATR3Q7Z4Q2 680 aa20.15■□□□□ 0.82
TPM1-214ENST00000558544 DPP9Q86TI2 863 aa20.15■□□□□ 0.82
TPM1-214ENST00000558544 DDX11Q96FC9 970 aa20.15■□□□□ 0.82
TPM1-214ENST00000558544 ZSCAN31Q96LW9 406 aaPredicted RBP20.15■□□□□ 0.82
TPM1-214ENST00000558544 APBA2Q99767 749 aa20.15■□□□□ 0.82
TPM1-214ENST00000558544 PTPDC1A2A3K4 754 aa20.14■□□□□ 0.81
TPM1-214ENST00000558544 COBLO75128 1261 aa20.14■□□□□ 0.81
TPM1-214ENST00000558544 CTDNEP1O95476 244 aa20.14■□□□□ 0.81
TPM1-214ENST00000558544 SSRP1Q08945 709 aaKnown RBP20.14■□□□□ 0.81
TPM1-214ENST00000558544 SLC30A10Q6XR72 485 aa20.14■□□□□ 0.81
TPM1-214ENST00000558544 CCDC83Q8IWF9 413 aa20.14■□□□□ 0.81
TPM1-214ENST00000558544 SH2B1Q9NRF2 756 aaPredicted RBP20.14■□□□□ 0.81
TPM1-214ENST00000558544 PFASO15067 1338 aa20.14■□□□□ 0.81
TPM1-214ENST00000558544 OPLAHO14841 1288 aa20.13■□□□□ 0.81
TPM1-214ENST00000558544 CDKL5O76039 1030 aa20.13■□□□□ 0.81
TPM1-214ENST00000558544 IRF5Q13568 498 aa20.13■□□□□ 0.81
TPM1-214ENST00000558544 PKN1Q16512 942 aa20.13■□□□□ 0.81
TPM1-214ENST00000558544 PKN2Q16513 984 aaKnown RBP20.13■□□□□ 0.81
TPM1-214ENST00000558544 PFKFB3Q16875 520 aaPredicted RBP20.13■□□□□ 0.81
TPM1-214ENST00000558544 COL13A1Q5TAT6 717 aaPredicted RBP20.13■□□□□ 0.81
TPM1-214ENST00000558544 FBXO46Q6PJ61 603 aaPredicted RBP20.13■□□□□ 0.81
TPM1-214ENST00000558544 RNF207Q6ZRF8 634 aa20.13■□□□□ 0.81
TPM1-214ENST00000558544 TRIM22Q8IYM9 498 aa20.13■□□□□ 0.81
TPM1-214ENST00000558544 NPLOC4Q8TAT6 608 aa20.13■□□□□ 0.81
TPM1-214ENST00000558544 TBC1D5Q92609 795 aa20.13■□□□□ 0.81
TPM1-214ENST00000558544 CYP39A1Q9NYL5 469 aa20.13■□□□□ 0.81
TPM1-214ENST00000558544 RBM27Q9P2N5 1060 aaKnown RBP20.13■□□□□ 0.81
TPM1-214ENST00000558544 LRRC37A2A6NM11 1700 aa20.13■□□□□ 0.81
TPM1-214ENST00000558544 DNAJC25-GNG10A0A024R161 153 aa20.12■□□□□ 0.81
TPM1-214ENST00000558544 SCG2P13521 617 aa20.12■□□□□ 0.81
TPM1-214ENST00000558544 MCM2P49736 904 aa20.12■□□□□ 0.81
TPM1-214ENST00000558544 BAATQ14032 418 aaPredicted RBP20.12■□□□□ 0.81
TPM1-214ENST00000558544 CCL14Q16627 93 aa20.12■□□□□ 0.81
TPM1-214ENST00000558544 MCOLN1Q9GZU1 580 aa20.12■□□□□ 0.81
TPM1-214ENST00000558544 POTEB2H3BUK9 544 aa20.11■□□□□ 0.81
TPM1-214ENST00000558544 STXBP3O00186 592 aa20.11■□□□□ 0.81
TPM1-214ENST00000558544 ADCY3O60266 1144 aa20.11■□□□□ 0.81
TPM1-214ENST00000558544 CFBP00751 764 aa20.11■□□□□ 0.81
TPM1-214ENST00000558544 HOXC6P09630 235 aa20.11■□□□□ 0.81
TPM1-214ENST00000558544 ELNP15502 786 aa20.11■□□□□ 0.81
TPM1-214ENST00000558544 CALML3P27482 149 aa20.11■□□□□ 0.81
TPM1-214ENST00000558544 NAPAP54920 295 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms