RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 HMX2A2RU54 273 aa7.9□□□□□ -1.14
ZEB1-211ENST00000558440 EIF4EBP3O60516 100 aaPredicted RBP7.9□□□□□ -1.14
ZEB1-211ENST00000558440 RAD17O75943 681 aa7.9□□□□□ -1.14
ZEB1-211ENST00000558440 HUNKP57058 714 aa7.9□□□□□ -1.14
ZEB1-211ENST00000558440 ZDHHC13Q8IUH4 622 aa7.9□□□□□ -1.14
ZEB1-211ENST00000558440 ZNF34Q8IZ26 560 aa7.9□□□□□ -1.14
ZEB1-211ENST00000558440 UTP14AQ9BVJ6 771 aaKnown RBP7.9□□□□□ -1.14
ZEB1-211ENST00000558440 RTFDC1Q9BY42 306 aaPredicted RBP7.9□□□□□ -1.14
ZEB1-211ENST00000558440 PGAP2Q9UHJ9 254 aa7.9□□□□□ -1.14
ZEB1-211ENST00000558440 H7C1D1 291 aa7.89□□□□□ -1.15
ZEB1-211ENST00000558440 BBOX1O75936 387 aa7.89□□□□□ -1.15
ZEB1-211ENST00000558440 DLGAP3O95886 979 aa7.89□□□□□ -1.15
ZEB1-211ENST00000558440 TGFB1P01137 390 aa7.89□□□□□ -1.15
ZEB1-211ENST00000558440 PPP2R1AP30153 589 aa7.89□□□□□ -1.15
ZEB1-211ENST00000558440 GRIA4P48058 902 aa7.89□□□□□ -1.15
ZEB1-211ENST00000558440 CD97P48960 835 aa7.89□□□□□ -1.15
ZEB1-211ENST00000558440 EIF4A1P60842 406 aaKnown RBP7.89□□□□□ -1.15
ZEB1-211ENST00000558440 KIAA2012Q0VF49 1180 aa7.89□□□□□ -1.15
ZEB1-211ENST00000558440 ORC1Q13415 861 aa7.89□□□□□ -1.15
ZEB1-211ENST00000558440 KIAA0319Q5VV43 1072 aa7.89□□□□□ -1.15
ZEB1-211ENST00000558440 BEND4Q6ZU67 534 aa7.89□□□□□ -1.15
ZEB1-211ENST00000558440 SMG8Q8ND04 991 aaKnown RBP7.89□□□□□ -1.15
ZEB1-211ENST00000558440 DBNDD2Q9BQY9 259 aa7.89□□□□□ -1.15
ZEB1-211ENST00000558440 NRSN2Q9GZP1 204 aa7.89□□□□□ -1.15
ZEB1-211ENST00000558440 CLEC4MQ9H2X3 399 aaPredicted RBP7.89□□□□□ -1.15
ZEB1-211ENST00000558440 SUGCTQ9HAC7 445 aa7.89□□□□□ -1.15
ZEB1-211ENST00000558440 CNOT7Q9UIV1 285 aaKnown RBP7.89□□□□□ -1.15
ZEB1-211ENST00000558440 PSME4Q14997 1843 aa7.88□□□□□ -1.15
ZEB1-211ENST00000558440 GAS2O43903 313 aaKnown RBP7.88□□□□□ -1.15
ZEB1-211ENST00000558440 CPNE3O75131 537 aaKnown RBP7.88□□□□□ -1.15
ZEB1-211ENST00000558440 TIAF1O95411 115 aa7.88□□□□□ -1.15
ZEB1-211ENST00000558440 IGHA2P01877 340 aa7.88□□□□□ -1.15
ZEB1-211ENST00000558440 SSTR4P31391 388 aa7.88□□□□□ -1.15
ZEB1-211ENST00000558440 GSTM4Q03013 218 aa7.88□□□□□ -1.15
ZEB1-211ENST00000558440 PCDH1Q08174 1060 aa7.88□□□□□ -1.15
ZEB1-211ENST00000558440 SPRED3Q2MJR0 410 aa7.88□□□□□ -1.15
ZEB1-211ENST00000558440 SLC10A5Q5PT55 438 aa7.88□□□□□ -1.15
ZEB1-211ENST00000558440 DDX46Q7L014 1031 aaKnown RBP7.88□□□□□ -1.15
ZEB1-211ENST00000558440 USP48Q86UV5 1035 aa7.88□□□□□ -1.15
ZEB1-211ENST00000558440 SP8Q8IXZ3 490 aa7.88□□□□□ -1.15
ZEB1-211ENST00000558440 KCNF1Q9H3M0 494 aa7.88□□□□□ -1.15
ZEB1-211ENST00000558440 CYP4F12Q9HCS2 524 aa7.88□□□□□ -1.15
ZEB1-211ENST00000558440 PCMTD2Q9NV79 361 aa7.88□□□□□ -1.15
ZEB1-211ENST00000558440 SCN9AQ15858 1988 aa7.88□□□□□ -1.15
ZEB1-211ENST00000558440 GPR182O15218 404 aa7.87□□□□□ -1.15
ZEB1-211ENST00000558440 GRAPQ13588 217 aa7.87□□□□□ -1.15
ZEB1-211ENST00000558440 ZNF423Q2M1K9 1284 aa7.87□□□□□ -1.15
ZEB1-211ENST00000558440 HSP90AB3PQ58FF7 597 aa7.87□□□□□ -1.15
ZEB1-211ENST00000558440 RGMBQ6NW40 437 aa7.87□□□□□ -1.15
ZEB1-211ENST00000558440 KRT26Q7Z3Y9 468 aa7.87□□□□□ -1.15
ZEB1-211ENST00000558440 TMC4Q7Z404 712 aa7.87□□□□□ -1.15
ZEB1-211ENST00000558440 C2orf69Q8N8R5 385 aa7.87□□□□□ -1.15
ZEB1-211ENST00000558440 C12orf50Q8NA57 414 aaPredicted RBP7.87□□□□□ -1.15
ZEB1-211ENST00000558440 GRAPLQ8TC17 118 aaPredicted RBP7.87□□□□□ -1.15
ZEB1-211ENST00000558440 THUMPD2Q9BTF0 503 aaKnown RBP7.87□□□□□ -1.15
ZEB1-211ENST00000558440 GBA2Q9HCG7 927 aaPredicted RBP7.87□□□□□ -1.15
ZEB1-211ENST00000558440 NPHS2Q9NP85 383 aa7.87□□□□□ -1.15
ZEB1-211ENST00000558440 SAGE1Q9NXZ1 904 aa7.87□□□□□ -1.15
ZEB1-211ENST00000558440 DUOX1Q9NRD9 1551 aa7.87□□□□□ -1.15
ZEB1-211ENST00000558440 CENPFP49454 3210 aa7.86□□□□□ -1.15
ZEB1-211ENST00000558440 MAPK8IP3Q9UPT6 1336 aa7.86□□□□□ -1.15
ZEB1-211ENST00000558440 SHTN1A0MZ66 631 aa7.86□□□□□ -1.15
ZEB1-211ENST00000558440 YDJCA8MPS7 323 aa7.86□□□□□ -1.15
ZEB1-211ENST00000558440 COBLO75128 1261 aa7.86□□□□□ -1.15
ZEB1-211ENST00000558440 HCLS1P14317 486 aaPredicted RBP7.86□□□□□ -1.15
ZEB1-211ENST00000558440 EIF2S2P20042 333 aaKnown RBP7.86□□□□□ -1.15
ZEB1-211ENST00000558440 MAP4P27816 1152 aaKnown RBP7.86□□□□□ -1.15
ZEB1-211ENST00000558440 ZNF157P51786 506 aaPredicted RBP7.86□□□□□ -1.15
ZEB1-211ENST00000558440 SOX10P56693 466 aa7.86□□□□□ -1.15
ZEB1-211ENST00000558440 NFE2L2Q16236 605 aa7.86□□□□□ -1.15
ZEB1-211ENST00000558440 TBC1D10BQ4KMP7 808 aaPredicted RBP7.86□□□□□ -1.15
ZEB1-211ENST00000558440 SGO2Q562F6 1265 aa7.86□□□□□ -1.15
ZEB1-211ENST00000558440 EXOSC6Q5RKV6 272 aaKnown RBP7.86□□□□□ -1.15
ZEB1-211ENST00000558440 DPF2Q92785 391 aa7.86□□□□□ -1.15
ZEB1-211ENST00000558440 DCPSQ96C86 337 aaKnown RBP7.86□□□□□ -1.15
ZEB1-211ENST00000558440 DNAJC25Q9H1X3 360 aa7.86□□□□□ -1.15
ZEB1-211ENST00000558440 TRMT112Q9UI30 125 aaKnown RBP7.86□□□□□ -1.15
ZEB1-211ENST00000558440 TSPYL4Q9UJ04 414 aa7.86□□□□□ -1.15
ZEB1-211ENST00000558440 SH3TC1Q8TE82 1336 aa7.85□□□□□ -1.15
ZEB1-211ENST00000558440 KIAA1324LA8MWY0 1029 aaPredicted RBP7.85□□□□□ -1.15
ZEB1-211ENST00000558440 FAM155AB1AL88 458 aaPredicted RBP7.85□□□□□ -1.15
ZEB1-211ENST00000558440 PSMD14O00487 310 aa7.85□□□□□ -1.15
ZEB1-211ENST00000558440 EIF1AYO14602 144 aaKnown RBP7.85□□□□□ -1.15
ZEB1-211ENST00000558440 MED26O95402 600 aa7.85□□□□□ -1.15
ZEB1-211ENST00000558440 ITPKAP23677 461 aa7.85□□□□□ -1.15
ZEB1-211ENST00000558440 RPS12P25398 132 aaKnown RBP7.85□□□□□ -1.15
ZEB1-211ENST00000558440 KIF23Q02241 960 aaPredicted RBP7.85□□□□□ -1.15
ZEB1-211ENST00000558440 NLRP10Q86W26 655 aa7.85□□□□□ -1.15
ZEB1-211ENST00000558440 EHD4Q9H223 541 aa7.85□□□□□ -1.15
ZEB1-211ENST00000558440 PNNQ9H307 717 aaKnown RBP7.85□□□□□ -1.15
ZEB1-211ENST00000558440 RNF186Q9NXI6 227 aa7.85□□□□□ -1.15
ZEB1-211ENST00000558440 MKI67P46013 3256 aaKnown RBP7.85□□□□□ -1.15
ZEB1-211ENST00000558440 PRR19A6NJB7 356 aa7.84□□□□□ -1.15
ZEB1-211ENST00000558440 ADM5C9JUS6 153 aa7.84□□□□□ -1.15
ZEB1-211ENST00000558440 B3GALT4O96024 378 aa7.84□□□□□ -1.15
ZEB1-211ENST00000558440 ANXA1P04083 346 aa7.84□□□□□ -1.15
ZEB1-211ENST00000558440 AIMP1Q12904 312 aaKnown RBP7.84□□□□□ -1.15
ZEB1-211ENST00000558440 PROSER3Q2NL68 480 aa7.84□□□□□ -1.15
ZEB1-211ENST00000558440 DLK2Q6UY11 383 aa7.84□□□□□ -1.15
ZEB1-211ENST00000558440 CTU1Q7Z7A3 348 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms