RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 ST7Q9NRC1 585 aa5.33□□□□□ -1.56
SPG11-206ENST00000558093 C2orf71A6NGG8 1288 aa5.32□□□□□ -1.56
SPG11-206ENST00000558093 NFIBO00712 420 aa5.32□□□□□ -1.56
SPG11-206ENST00000558093 GJB6O95452 261 aa5.32□□□□□ -1.56
SPG11-206ENST00000558093 C8AP07357 584 aa5.32□□□□□ -1.56
SPG11-206ENST00000558093 CYP4F8P98187 520 aa5.32□□□□□ -1.56
SPG11-206ENST00000558093 DDR2Q16832 855 aa5.32□□□□□ -1.56
SPG11-206ENST00000558093 OLFML2BQ68BL8 750 aa5.32□□□□□ -1.56
SPG11-206ENST00000558093 TMEM132EQ6IEE7 984 aa5.32□□□□□ -1.56
SPG11-206ENST00000558093 TMEM52Q8NDY8 209 aa5.32□□□□□ -1.56
SPG11-206ENST00000558093 SHISA4Q96DD7 197 aa5.32□□□□□ -1.56
SPG11-206ENST00000558093 C8orf37Q96NL8 207 aa5.32□□□□□ -1.56
SPG11-206ENST00000558093 SLC26A8Q96RN1 970 aa5.32□□□□□ -1.56
SPG11-206ENST00000558093 MCMBPQ9BTE3 642 aa5.32□□□□□ -1.56
SPG11-206ENST00000558093 GOLGA2P5Q9HBQ8 144 aa5.32□□□□□ -1.56
SPG11-206ENST00000558093 EMC9Q9Y3B6 208 aa5.32□□□□□ -1.56
SPG11-206ENST00000558093 TRBV23OR9-2A0A075B6M9 112 aa5.31□□□□□ -1.56
SPG11-206ENST00000558093 NPHP3-ACAD11A0A0J9YXS1 232 aa5.31□□□□□ -1.56
SPG11-206ENST00000558093 EFEMP2O95967 443 aa5.31□□□□□ -1.56
SPG11-206ENST00000558093 MPOP05164 745 aa5.31□□□□□ -1.56
SPG11-206ENST00000558093 YBX3P16989 372 aaKnown RBP eCLIP5.31□□□□□ -1.56
SPG11-206ENST00000558093 PAMP19021 973 aa5.31□□□□□ -1.56
SPG11-206ENST00000558093 SDHBP21912 280 aa5.31□□□□□ -1.56
SPG11-206ENST00000558093 L1CAMP32004 1257 aa5.31□□□□□ -1.56
SPG11-206ENST00000558093 MESP2Q0VG99 397 aa5.31□□□□□ -1.56
SPG11-206ENST00000558093 SCRN1Q12765 414 aa5.31□□□□□ -1.56
SPG11-206ENST00000558093 KIR3DS1Q14943 382 aa5.31□□□□□ -1.56
SPG11-206ENST00000558093 ZNF124Q15973 351 aa5.31□□□□□ -1.56
SPG11-206ENST00000558093 GTF2IRD2BQ6EKJ0 949 aa5.31□□□□□ -1.56
SPG11-206ENST00000558093 MRM1Q6IN84 353 aaKnown RBP5.31□□□□□ -1.56
SPG11-206ENST00000558093 GTF2IRD2Q86UP8 949 aa5.31□□□□□ -1.56
SPG11-206ENST00000558093 ZNF227Q86WZ6 799 aa5.31□□□□□ -1.56
SPG11-206ENST00000558093 TRIM59Q8IWR1 403 aa5.31□□□□□ -1.56
SPG11-206ENST00000558093 CELF2-AS1Q8N7Q2 184 aa5.31□□□□□ -1.56
SPG11-206ENST00000558093 MICAL1Q8TDZ2 1067 aa5.31□□□□□ -1.56
SPG11-206ENST00000558093 LGR4Q9BXB1 951 aa5.31□□□□□ -1.56
SPG11-206ENST00000558093 NUDT19A8MXV4 375 aa5.3□□□□□ -1.56
SPG11-206ENST00000558093 ITGAVP06756 1048 aa5.3□□□□□ -1.56
SPG11-206ENST00000558093 TMEM253P0C7T8 217 aa5.3□□□□□ -1.56
SPG11-206ENST00000558093 TACR1P25103 407 aa5.3□□□□□ -1.56
SPG11-206ENST00000558093 GTF2F1P35269 517 aaKnown RBP eCLIP5.3□□□□□ -1.56
SPG11-206ENST00000558093 TMEM62Q0P6H9 643 aa5.3□□□□□ -1.56
SPG11-206ENST00000558093 RAB3GAP1Q15042 981 aa5.3□□□□□ -1.56
SPG11-206ENST00000558093 BICRALQ6AI39 1079 aa5.3□□□□□ -1.56
SPG11-206ENST00000558093 ZNF513Q8N8E2 541 aaPredicted RBP5.3□□□□□ -1.56
SPG11-206ENST00000558093 BTN2A2Q8WVV5 523 aa5.3□□□□□ -1.56
SPG11-206ENST00000558093 EPN3Q9H201 632 aa5.3□□□□□ -1.56
SPG11-206ENST00000558093 KCNK12Q9HB15 430 aa5.3□□□□□ -1.56
SPG11-206ENST00000558093 ACSL6Q9UKU0 697 aa5.3□□□□□ -1.56
SPG11-206ENST00000558093 TCAF2A6NFQ2 919 aa5.29□□□□□ -1.56
SPG11-206ENST00000558093 SNRPB2P08579 225 aaKnown RBP5.29□□□□□ -1.56
SPG11-206ENST00000558093 RAP1GAPP47736 663 aa5.29□□□□□ -1.56
SPG11-206ENST00000558093 KCNJ6P48051 423 aa5.29□□□□□ -1.56
SPG11-206ENST00000558093 CORO7P57737 925 aa5.29□□□□□ -1.56
SPG11-206ENST00000558093 ERVFRD-1P60508 538 aa5.29□□□□□ -1.56
SPG11-206ENST00000558093 RBM10P98175 930 aaKnown RBP5.29□□□□□ -1.56
SPG11-206ENST00000558093 SLC10A6Q3KNW5 377 aa5.29□□□□□ -1.56
SPG11-206ENST00000558093 CABP7Q86V35 215 aa5.29□□□□□ -1.56
SPG11-206ENST00000558093 CPNE8Q86YQ8 564 aa5.29□□□□□ -1.56
SPG11-206ENST00000558093 BHLHE22Q8NFJ8 381 aaPredicted RBP5.29□□□□□ -1.56
SPG11-206ENST00000558093 KCNN1Q92952 543 aa5.29□□□□□ -1.56
SPG11-206ENST00000558093 NKX2-4Q9H2Z4 354 aa5.29□□□□□ -1.56
SPG11-206ENST00000558093 TNFRSF12AQ9NP84 129 aa5.29□□□□□ -1.56
SPG11-206ENST00000558093 PDLIM7Q9NR12 457 aa5.29□□□□□ -1.56
SPG11-206ENST00000558093 SIRT5Q9NXA8 310 aa5.29□□□□□ -1.56
SPG11-206ENST00000558093 CLEC1BQ9P126 229 aa5.29□□□□□ -1.56
SPG11-206ENST00000558093 CCDC85CA6NKD9 419 aa5.28□□□□□ -1.56
SPG11-206ENST00000558093 ABLIM1O14639 778 aa5.28□□□□□ -1.56
SPG11-206ENST00000558093 TBX1O43435 398 aa5.28□□□□□ -1.56
SPG11-206ENST00000558093 KLF4O43474 513 aa5.28□□□□□ -1.56
SPG11-206ENST00000558093 SEMA7AO75326 666 aa5.28□□□□□ -1.56
SPG11-206ENST00000558093 TSPAN15O95858 294 aa5.28□□□□□ -1.56
SPG11-206ENST00000558093 THBDP07204 575 aa5.28□□□□□ -1.56
SPG11-206ENST00000558093 MSL3P1P0C860 447 aa5.28□□□□□ -1.56
SPG11-206ENST00000558093 PLS3P13797 630 aa5.28□□□□□ -1.56
SPG11-206ENST00000558093 ECI1P42126 302 aa5.28□□□□□ -1.56
SPG11-206ENST00000558093 CEBPAP49715 358 aaPredicted RBP5.28□□□□□ -1.56
SPG11-206ENST00000558093 SRSF3P84103 164 aaKnown RBP5.28□□□□□ -1.56
SPG11-206ENST00000558093 MVKQ03426 396 aa5.28□□□□□ -1.56
SPG11-206ENST00000558093 RAB33AQ14088 237 aa5.28□□□□□ -1.56
SPG11-206ENST00000558093 SF3A1Q15459 793 aaKnown RBP5.28□□□□□ -1.56
SPG11-206ENST00000558093 USP33Q8TEY7 942 aa5.28□□□□□ -1.56
SPG11-206ENST00000558093 MRGPRX3Q96LB0 322 aa5.28□□□□□ -1.56
SPG11-206ENST00000558093 HIRIP3Q9BW71 556 aaPredicted RBP5.28□□□□□ -1.56
SPG11-206ENST00000558093 MCOLN1Q9GZU1 580 aa5.28□□□□□ -1.56
SPG11-206ENST00000558093 ZNF552Q9H707 407 aaPredicted RBP5.28□□□□□ -1.56
SPG11-206ENST00000558093 GPRC5CQ9NQ84 441 aa5.28□□□□□ -1.56
SPG11-206ENST00000558093 CYP26B1Q9NR63 512 aa5.28□□□□□ -1.56
SPG11-206ENST00000558093 DBR1Q9UK59 544 aaKnown RBP5.28□□□□□ -1.56
SPG11-206ENST00000558093 RWDD3Q9Y3V2 267 aa5.28□□□□□ -1.56
SPG11-206ENST00000558093 IQCA1LA6NCM1 817 aa5.27□□□□□ -1.57
SPG11-206ENST00000558093 ETV2O00321 342 aaPredicted RBP5.27□□□□□ -1.57
SPG11-206ENST00000558093 NPHS1O60500 1241 aa5.27□□□□□ -1.57
SPG11-206ENST00000558093 PEX10O60683 326 aa5.27□□□□□ -1.57
SPG11-206ENST00000558093 ATG14Q6ZNE5 492 aa5.27□□□□□ -1.57
SPG11-206ENST00000558093 TMC6Q7Z403 805 aa5.27□□□□□ -1.57
SPG11-206ENST00000558093 LZTR1Q8N653 840 aa5.27□□□□□ -1.57
SPG11-206ENST00000558093 BTG4Q9NY30 223 aa5.27□□□□□ -1.57
SPG11-206ENST00000558093 GULP1Q9UBP9 304 aa5.27□□□□□ -1.57
SPG11-206ENST00000558093 TEX51A0A1B0GUA7 166 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms