RNA–Protein interactions for RNA: ENST00000558006.1

AC009996.1-201, humanhuman

TSL 5 BASIC

Gene AC009996.1, Length 653 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009996.1-201ENST00000558006 ARPP21Q9UBL0 812 aaPredicted RBP11.32□□□□□ -0.6
AC009996.1-201ENST00000558006 SEPT9Q9UHD8 586 aaPredicted RBP11.32□□□□□ -0.6
AC009996.1-201ENST00000558006 NRBP1Q9UHY1 535 aa11.32□□□□□ -0.6
AC009996.1-201ENST00000558006 PPP1R9AQ9ULJ8 1098 aa11.32□□□□□ -0.6
AC009996.1-201ENST00000558006 ADAMTS5Q9UNA0 930 aa11.32□□□□□ -0.6
AC009996.1-201ENST00000558006 TACC3Q9Y6A5 838 aa11.32□□□□□ -0.6
AC009996.1-201ENST00000558006 MYO9BQ13459 2157 aa11.32□□□□□ -0.6
AC009996.1-201ENST00000558006 VWA5AO00534 786 aa11.31□□□□□ -0.6
AC009996.1-201ENST00000558006 KIAA0355O15063 1070 aa11.31□□□□□ -0.6
AC009996.1-201ENST00000558006 ZNF865P0CJ78 1059 aaPredicted RBP11.31□□□□□ -0.6
AC009996.1-201ENST00000558006 COPB2P35606 906 aa11.31□□□□□ -0.6
AC009996.1-201ENST00000558006 FAAP100Q0VG06 881 aa11.31□□□□□ -0.6
AC009996.1-201ENST00000558006 GRIN2CQ14957 1233 aa11.31□□□□□ -0.6
AC009996.1-201ENST00000558006 ZNF792Q3KQV3 632 aa11.31□□□□□ -0.6
AC009996.1-201ENST00000558006 RNF180Q86T96 592 aa11.31□□□□□ -0.6
AC009996.1-201ENST00000558006 STK11IPQ8N1F8 1099 aa11.31□□□□□ -0.6
AC009996.1-201ENST00000558006 USP38Q8NB14 1042 aa11.31□□□□□ -0.6
AC009996.1-201ENST00000558006 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.31□□□□□ -0.6
AC009996.1-201ENST00000558006 LRRCC1Q9C099 1032 aa11.31□□□□□ -0.6
AC009996.1-201ENST00000558006 PUS7LQ9H0K6 701 aaKnown RBP11.31□□□□□ -0.6
AC009996.1-201ENST00000558006 ZNF214Q9UL59 606 aaPredicted RBP11.31□□□□□ -0.6
AC009996.1-201ENST00000558006 ROBO3Q96MS0 1386 aa11.3□□□□□ -0.6
AC009996.1-201ENST00000558006 SMARCA5O60264 1052 aaPredicted RBP11.3□□□□□ -0.6
AC009996.1-201ENST00000558006 ADAMTS4O75173 837 aa11.3□□□□□ -0.6
AC009996.1-201ENST00000558006 AKR1A1P14550 325 aa11.3□□□□□ -0.6
AC009996.1-201ENST00000558006 RAG1P15918 1043 aa11.3□□□□□ -0.6
AC009996.1-201ENST00000558006 REPS2Q8NFH8 660 aa11.3□□□□□ -0.6
AC009996.1-201ENST00000558006 NUP88Q99567 741 aaPredicted RBP11.3□□□□□ -0.6
AC009996.1-201ENST00000558006 SLF1Q9BQI6 1058 aa11.3□□□□□ -0.6
AC009996.1-201ENST00000558006 TMEM39AQ9NV64 488 aa11.3□□□□□ -0.6
AC009996.1-201ENST00000558006 CNPY2Q9Y2B0 182 aa11.3□□□□□ -0.6
AC009996.1-201ENST00000558006 DIS3Q9Y2L1 958 aaKnown RBP11.3□□□□□ -0.6
AC009996.1-201ENST00000558006 RIPK3Q9Y572 518 aa11.3□□□□□ -0.6
AC009996.1-201ENST00000558006 GBF1Q92538 1859 aa11.29□□□□□ -0.6
AC009996.1-201ENST00000558006 MYADML2A6NDP7 307 aa11.29□□□□□ -0.6
AC009996.1-201ENST00000558006 MINDY4BA8MYZ0 360 aa11.29□□□□□ -0.6
AC009996.1-201ENST00000558006 SNAI1O95863 264 aaPredicted RBP11.29□□□□□ -0.6
AC009996.1-201ENST00000558006 SLC4A3P48751 1232 aa11.29□□□□□ -0.6
AC009996.1-201ENST00000558006 ACLYP53396 1101 aa11.29□□□□□ -0.6
AC009996.1-201ENST00000558006 FPGSQ05932 587 aa11.29□□□□□ -0.6
AC009996.1-201ENST00000558006 SWT1Q5T5J6 900 aaKnown RBP11.29□□□□□ -0.6
AC009996.1-201ENST00000558006 SNRNP48Q6IEG0 339 aaKnown RBP11.29□□□□□ -0.6
AC009996.1-201ENST00000558006 TEX13BQ9BXU2 312 aa11.29□□□□□ -0.6
AC009996.1-201ENST00000558006 MKNK2Q9HBH9 465 aa11.29□□□□□ -0.6
AC009996.1-201ENST00000558006 PRDM6Q9NQX0 595 aa11.29□□□□□ -0.6
AC009996.1-201ENST00000558006 ECHDC1Q9NTX5 307 aa11.29□□□□□ -0.6
AC009996.1-201ENST00000558006 VPS9D1Q9Y2B5 631 aa11.29□□□□□ -0.6
AC009996.1-201ENST00000558006 SYNRGQ9UMZ2 1314 aa11.29□□□□□ -0.6
AC009996.1-201ENST00000558006 MUC3AQ02505 3323 aa11.28□□□□□ -0.6
AC009996.1-201ENST00000558006 GRXCR1A8MXD5 290 aa11.28□□□□□ -0.6
AC009996.1-201ENST00000558006 ADCY6O43306 1168 aa11.28□□□□□ -0.6
AC009996.1-201ENST00000558006 NDUFB10O96000 172 aa11.28□□□□□ -0.6
AC009996.1-201ENST00000558006 RASA1P20936 1047 aa11.28□□□□□ -0.6
AC009996.1-201ENST00000558006 SBK1Q52WX2 424 aa11.28□□□□□ -0.6
AC009996.1-201ENST00000558006 CCSAPQ6IQ19 270 aaPredicted RBP11.28□□□□□ -0.6
AC009996.1-201ENST00000558006 C16orf59Q7L2K0 433 aa11.28□□□□□ -0.6
AC009996.1-201ENST00000558006 ANKRD33Q7Z3H0 272 aa11.28□□□□□ -0.6
AC009996.1-201ENST00000558006 DDX11Q96FC9 970 aa11.28□□□□□ -0.6
AC009996.1-201ENST00000558006 STRBPQ96SI9 672 aaKnown RBP11.28□□□□□ -0.6
AC009996.1-201ENST00000558006 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.28□□□□□ -0.6
AC009996.1-201ENST00000558006 STARD7Q9NQZ5 370 aa11.28□□□□□ -0.6
AC009996.1-201ENST00000558006 LIMD1Q9UGP4 676 aa11.28□□□□□ -0.6
AC009996.1-201ENST00000558006 RCAN3Q9UKA8 241 aa11.28□□□□□ -0.6
AC009996.1-201ENST00000558006 ZHX1Q9UKY1 873 aaPredicted RBP11.28□□□□□ -0.6
AC009996.1-201ENST00000558006 CTDP1Q9Y5B0 961 aaPredicted RBP11.28□□□□□ -0.6
AC009996.1-201ENST00000558006 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.27□□□□□ -0.61
AC009996.1-201ENST00000558006 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.27□□□□□ -0.61
AC009996.1-201ENST00000558006 GSG1L2A8MUP6 293 aa11.27□□□□□ -0.61
AC009996.1-201ENST00000558006 F5H6K3 240 aa11.27□□□□□ -0.61
AC009996.1-201ENST00000558006 TDO2P48775 406 aa11.27□□□□□ -0.61
AC009996.1-201ENST00000558006 KLRC3Q07444 240 aa11.27□□□□□ -0.61
AC009996.1-201ENST00000558006 KCNA10Q16322 511 aa11.27□□□□□ -0.61
AC009996.1-201ENST00000558006 CPXCR1Q8N123 301 aa11.27□□□□□ -0.61
AC009996.1-201ENST00000558006 MSL3Q8N5Y2 521 aaKnown RBP11.27□□□□□ -0.61
AC009996.1-201ENST00000558006 KBTBD3Q8NAB2 608 aa11.27□□□□□ -0.61
AC009996.1-201ENST00000558006 PRPF38AQ8NAV1 312 aaKnown RBP11.27□□□□□ -0.61
AC009996.1-201ENST00000558006 KLHDC9Q8NEP7 349 aa11.27□□□□□ -0.61
AC009996.1-201ENST00000558006 APPBP2Q92624 585 aa11.27□□□□□ -0.61
AC009996.1-201ENST00000558006 GPATCH3Q96I76 525 aa11.27□□□□□ -0.61
AC009996.1-201ENST00000558006 ZNF576Q9H609 170 aa11.27□□□□□ -0.61
AC009996.1-201ENST00000558006 NYAP2Q9P242 653 aa11.27□□□□□ -0.61
AC009996.1-201ENST00000558006 FAM184BQ9ULE4 1060 aa11.27□□□□□ -0.61
AC009996.1-201ENST00000558006 SYNGAP1Q96PV0 1343 aa11.27□□□□□ -0.61
AC009996.1-201ENST00000558006 TTC28Q96AY4 2481 aa11.26□□□□□ -0.61
AC009996.1-201ENST00000558006 DNAJC25-GNG10A0A024R161 153 aa11.26□□□□□ -0.61
AC009996.1-201ENST00000558006 TMEM265A0A087WTH1 108 aa11.26□□□□□ -0.61
AC009996.1-201ENST00000558006 DCDC2CA8MYV0 355 aa11.26□□□□□ -0.61
AC009996.1-201ENST00000558006 SPTLC1O15269 473 aa11.26□□□□□ -0.61
AC009996.1-201ENST00000558006 GPAA1O43292 621 aa11.26□□□□□ -0.61
AC009996.1-201ENST00000558006 ZBED4O75132 1171 aa11.26□□□□□ -0.61
AC009996.1-201ENST00000558006 KDM4AO75164 1064 aa11.26□□□□□ -0.61
AC009996.1-201ENST00000558006 PRDM1O75626 825 aa11.26□□□□□ -0.61
AC009996.1-201ENST00000558006 TIMP1P01033 207 aa11.26□□□□□ -0.61
AC009996.1-201ENST00000558006 APPP05067 770 aa11.26□□□□□ -0.61
AC009996.1-201ENST00000558006 C20orf194Q5TEA3 1177 aa11.26□□□□□ -0.61
AC009996.1-201ENST00000558006 TSHZ3Q63HK5 1081 aa11.26□□□□□ -0.61
AC009996.1-201ENST00000558006 GIMAP6Q6P9H5 292 aa11.26□□□□□ -0.61
AC009996.1-201ENST00000558006 ZNF444Q8N0Y2 327 aaPredicted RBP11.26□□□□□ -0.61
AC009996.1-201ENST00000558006 NUP133Q8WUM0 1156 aa11.26□□□□□ -0.61
AC009996.1-201ENST00000558006 PPM1EQ8WY54 764 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms