RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 RRP36Q96EU6 259 aaKnown RBP29.62■■■□□ 2.33
SMAD6-202ENST00000557916 AMNQ9BXJ7 453 aa29.62■■■□□ 2.33
SMAD6-202ENST00000557916 NID2Q14112 1375 aa29.62■■■□□ 2.33
SMAD6-202ENST00000557916 PLXNB2O15031 1838 aa29.62■■■□□ 2.33
SMAD6-202ENST00000557916 PNMA6FA0A0J9YX94 578 aa29.62■■■□□ 2.33
SMAD6-202ENST00000557916 ADCY3O60266 1144 aa29.62■■■□□ 2.33
SMAD6-202ENST00000557916 ANKRD35Q8N283 1001 aa29.62■■■□□ 2.33
SMAD6-202ENST00000557916 CCT2P78371 535 aaKnown RBP29.61■■■□□ 2.33
SMAD6-202ENST00000557916 DDX11Q96FC9 970 aa29.61■■■□□ 2.33
SMAD6-202ENST00000557916 APBA2Q99767 749 aa29.61■■■□□ 2.33
SMAD6-202ENST00000557916 BAZ2BQ9UIF8 2168 aaKnown RBP29.6■■■□□ 2.33
SMAD6-202ENST00000557916 ABCB11O95342 1321 aa29.6■■■□□ 2.33
SMAD6-202ENST00000557916 PPP1R11O60927 126 aaPredicted RBP29.6■■■□□ 2.33
SMAD6-202ENST00000557916 COBLO75128 1261 aa29.6■■■□□ 2.33
SMAD6-202ENST00000557916 PGK2P07205 417 aa29.6■■■□□ 2.33
SMAD6-202ENST00000557916 HOXC6P09630 235 aa29.6■■■□□ 2.33
SMAD6-202ENST00000557916 XRCC5P13010 732 aaKnown RBP29.6■■■□□ 2.33
SMAD6-202ENST00000557916 TNS4Q8IZW8 715 aa29.6■■■□□ 2.33
SMAD6-202ENST00000557916 SEC63Q9UGP8 760 aaKnown RBP29.6■■■□□ 2.33
SMAD6-202ENST00000557916 TPCN1Q9ULQ1 816 aa29.6■■■□□ 2.33
SMAD6-202ENST00000557916 GRK4P32298 578 aa29.59■■■□□ 2.33
SMAD6-202ENST00000557916 FUT2Q10981 343 aa29.59■■■□□ 2.33
SMAD6-202ENST00000557916 STK3Q13188 491 aa29.59■■■□□ 2.33
SMAD6-202ENST00000557916 NOL8Q76FK4 1167 aaKnown RBP29.59■■■□□ 2.33
SMAD6-202ENST00000557916 PXYLP1Q8TE99 480 aa29.59■■■□□ 2.33
SMAD6-202ENST00000557916 CLEC4DQ8WXI8 215 aa29.59■■■□□ 2.33
SMAD6-202ENST00000557916 A1CFQ9NQ94 594 aaKnown RBP29.59■■■□□ 2.33
SMAD6-202ENST00000557916 SLC5A4Q9NY91 659 aa29.59■■■□□ 2.33
SMAD6-202ENST00000557916 PCDHA1Q9Y5I3 950 aa29.59■■■□□ 2.33
SMAD6-202ENST00000557916 NFIBO00712 420 aa29.58■■■□□ 2.33
SMAD6-202ENST00000557916 TRAF1Q13077 416 aa29.58■■■□□ 2.33
SMAD6-202ENST00000557916 RABEP1Q15276 862 aa29.58■■■□□ 2.33
SMAD6-202ENST00000557916 SLC9C1Q4G0N8 1177 aa29.58■■■□□ 2.33
SMAD6-202ENST00000557916 NSMFQ6X4W1 530 aa29.58■■■□□ 2.33
SMAD6-202ENST00000557916 SLAIN1Q8ND83 568 aa29.58■■■□□ 2.33
SMAD6-202ENST00000557916 NCOA5Q9HCD5 579 aaKnown RBP29.58■■■□□ 2.33
SMAD6-202ENST00000557916 MRPL11Q9Y3B7 192 aaKnown RBP29.58■■■□□ 2.33
SMAD6-202ENST00000557916 SMCHD1A6NHR9 2005 aa29.58■■■□□ 2.33
SMAD6-202ENST00000557916 CNTNAP5Q8WYK1 1306 aa29.57■■■□□ 2.32
SMAD6-202ENST00000557916 ZNF236Q9UL36 1845 aa29.57■■■□□ 2.32
SMAD6-202ENST00000557916 ELNP15502 786 aa29.57■■■□□ 2.32
SMAD6-202ENST00000557916 NPLOC4Q8TAT6 608 aa29.57■■■□□ 2.32
SMAD6-202ENST00000557916 HTTP42858 3142 aa29.57■■■□□ 2.32
SMAD6-202ENST00000557916 hCG_1642624A0A1W2PR95 340 aa29.56■■■□□ 2.32
SMAD6-202ENST00000557916 SH3TC2Q8TF17 1288 aa29.56■■■□□ 2.32
SMAD6-202ENST00000557916 PFASO15067 1338 aa29.56■■■□□ 2.32
SMAD6-202ENST00000557916 CCL14Q16627 93 aa29.55■■■□□ 2.32
SMAD6-202ENST00000557916 ZNF792Q3KQV3 632 aa29.55■■■□□ 2.32
SMAD6-202ENST00000557916 TRMT44Q8IYL2 757 aaKnown RBP29.55■■■□□ 2.32
SMAD6-202ENST00000557916 SLKQ9H2G2 1235 aaPredicted RBP29.55■■■□□ 2.32
SMAD6-202ENST00000557916 CYP39A1Q9NYL5 469 aa29.55■■■□□ 2.32
SMAD6-202ENST00000557916 BIN2Q9UBW5 565 aaPredicted RBP29.55■■■□□ 2.32
SMAD6-202ENST00000557916 V9GY48 417 aaPredicted RBP29.55■■■□□ 2.32
SMAD6-202ENST00000557916 MYH6P13533 1939 aa29.55■■■□□ 2.32
SMAD6-202ENST00000557916 DNAJC25-GNG10A0A024R161 153 aa29.54■■■□□ 2.32
SMAD6-202ENST00000557916 PTPDC1A2A3K4 754 aa29.54■■■□□ 2.32
SMAD6-202ENST00000557916 POTEB2H3BUK9 544 aa29.54■■■□□ 2.32
SMAD6-202ENST00000557916 PFKFB2O60825 505 aa29.54■■■□□ 2.32
SMAD6-202ENST00000557916 NTRK3Q16288 839 aa29.54■■■□□ 2.32
SMAD6-202ENST00000557916 RGS22Q8NE09 1264 aa29.54■■■□□ 2.32
SMAD6-202ENST00000557916 TRIB2Q92519 343 aa29.54■■■□□ 2.32
SMAD6-202ENST00000557916 DIS3Q9Y2L1 958 aaKnown RBP29.54■■■□□ 2.32
SMAD6-202ENST00000557916 ZNFX1Q9P2E3 1918 aaKnown RBP29.53■■■□□ 2.32
SMAD6-202ENST00000557916 CPLX1O14810 134 aa29.53■■■□□ 2.32
SMAD6-202ENST00000557916 BAATQ14032 418 aaPredicted RBP29.53■■■□□ 2.32
SMAD6-202ENST00000557916 RNF207Q6ZRF8 634 aa29.53■■■□□ 2.32
SMAD6-202ENST00000557916 MCF2L2Q86YR7 1114 aa29.53■■■□□ 2.32
SMAD6-202ENST00000557916 MAML3Q96JK9 1138 aa29.53■■■□□ 2.32
SMAD6-202ENST00000557916 FLRT1Q9NZU1 646 aa29.53■■■□□ 2.32
SMAD6-202ENST00000557916 HMGCRP04035 888 aa29.52■■■□□ 2.32
SMAD6-202ENST00000557916 IFNAR1P17181 557 aa29.52■■■□□ 2.32
SMAD6-202ENST00000557916 SCRN1Q12765 414 aa29.52■■■□□ 2.32
SMAD6-202ENST00000557916 ME3Q16798 604 aa29.52■■■□□ 2.32
SMAD6-202ENST00000557916 PHKBQ93100 1093 aa29.52■■■□□ 2.32
SMAD6-202ENST00000557916 ARMC5Q96C12 935 aa29.52■■■□□ 2.32
SMAD6-202ENST00000557916 RPS6P62753 249 aaKnown RBP29.51■■■□□ 2.31
SMAD6-202ENST00000557916 CNTN2Q02246 1040 aa29.51■■■□□ 2.31
SMAD6-202ENST00000557916 OLFML2BQ68BL8 750 aa29.51■■■□□ 2.31
SMAD6-202ENST00000557916 CPLX2Q6PUV4 134 aaKnown RBP29.51■■■□□ 2.31
SMAD6-202ENST00000557916 FAM133AQ8N9E0 248 aa29.51■■■□□ 2.31
SMAD6-202ENST00000557916 IL27Q8NEV9 243 aa29.51■■■□□ 2.31
SMAD6-202ENST00000557916 TBC1D5Q92609 795 aa29.51■■■□□ 2.31
SMAD6-202ENST00000557916 MAF1Q9H063 256 aa29.51■■■□□ 2.31
SMAD6-202ENST00000557916 LIMCH1Q9UPQ0 1083 aa29.51■■■□□ 2.31
SMAD6-202ENST00000557916 ST18O60284 1047 aa29.5■■■□□ 2.31
SMAD6-202ENST00000557916 SLC30A10Q6XR72 485 aa29.5■■■□□ 2.31
SMAD6-202ENST00000557916 ABHD8Q96I13 439 aa29.5■■■□□ 2.31
SMAD6-202ENST00000557916 OPLAHO14841 1288 aa29.49■■■□□ 2.31
SMAD6-202ENST00000557916 PRPF3O43395 683 aaKnown RBP29.49■■■□□ 2.31
SMAD6-202ENST00000557916 PPFIA3O75145 1194 aa29.49■■■□□ 2.31
SMAD6-202ENST00000557916 LARGE1O95461 756 aa29.49■■■□□ 2.31
SMAD6-202ENST00000557916 INHAP05111 366 aa29.49■■■□□ 2.31
SMAD6-202ENST00000557916 CALML3P27482 149 aa29.49■■■□□ 2.31
SMAD6-202ENST00000557916 UBXN2AP68543 259 aa29.49■■■□□ 2.31
SMAD6-202ENST00000557916 AKAP17AQ02040 695 aaKnown RBP29.49■■■□□ 2.31
SMAD6-202ENST00000557916 MFSD14CQ5VZR4 134 aa29.49■■■□□ 2.31
SMAD6-202ENST00000557916 HEATR3Q7Z4Q2 680 aa29.49■■■□□ 2.31
SMAD6-202ENST00000557916 ZNF333Q96JL9 665 aa29.49■■■□□ 2.31
SMAD6-202ENST00000557916 SLC26A6Q9BXS9 759 aa29.49■■■□□ 2.31
SMAD6-202ENST00000557916 RNF26Q9BY78 433 aaPredicted RBP29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms