RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 ZNF445P59923 1031 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 CXCL9Q07325 125 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 TCP10Q12799 353 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 GRM4Q14833 912 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 TPRNQ4KMQ1 711 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 CCDC178Q5BJE1 867 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 NIM1KQ8IY84 436 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 STAG2Q8N3U4 1231 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 NLGN2Q8NFZ4 835 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 EPS8L1Q8TE68 723 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 CEP95Q96GE4 821 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 SPATA32Q96LK8 384 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 MAP3K14Q99558 947 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 RNF26Q9BY78 433 aaPredicted RBP8.53□□□□□ -1.04
SPG11-204ENST00000557866 SCAND2PQ9GZW5 306 aaPredicted RBP8.53□□□□□ -1.04
SPG11-204ENST00000557866 TDRD3Q9H7E2 651 aaKnown RBP8.53□□□□□ -1.04
SPG11-204ENST00000557866 KAT14Q9H8E8 782 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 ZNF287Q9HBT7 754 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 SERPINB13Q9UIV8 391 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 KCNJ14Q9UNX9 436 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 GOLGB1Q14789 3259 aaKnown RBP8.53□□□□□ -1.04
SPG11-204ENST00000557866 DLEC1Q9Y238 1755 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 KIF13BQ9NQT8 1826 aa8.52□□□□□ -1.04
SPG11-204ENST00000557866 PALM3A6NDB9 673 aaPredicted RBP8.52□□□□□ -1.05
SPG11-204ENST00000557866 WIPF1O43516 503 aa8.52□□□□□ -1.05
SPG11-204ENST00000557866 MMP1P03956 469 aa8.52□□□□□ -1.05
SPG11-204ENST00000557866 LIG1P18858 919 aa8.52□□□□□ -1.05
SPG11-204ENST00000557866 U2AF2P26368 475 aaKnown RBP eCLIP8.52□□□□□ -1.05
SPG11-204ENST00000557866 CEBPZQ03701 1054 aaKnown RBP8.52□□□□□ -1.05
SPG11-204ENST00000557866 SHROOM1Q2M3G4 852 aaPredicted RBP8.52□□□□□ -1.05
SPG11-204ENST00000557866 ATL3Q6DD88 541 aa8.52□□□□□ -1.05
SPG11-204ENST00000557866 RASGRP2Q7LDG7 609 aa8.52□□□□□ -1.05
SPG11-204ENST00000557866 BRAPQ7Z569 592 aa8.52□□□□□ -1.05
SPG11-204ENST00000557866 METTL16Q86W50 562 aaKnown RBP8.52□□□□□ -1.05
SPG11-204ENST00000557866 TRIM22Q8IYM9 498 aa8.52□□□□□ -1.05
SPG11-204ENST00000557866 WASF1Q92558 559 aa8.52□□□□□ -1.05
SPG11-204ENST00000557866 ZBED3Q96IU2 234 aaPredicted RBP8.52□□□□□ -1.05
SPG11-204ENST00000557866 ZNF396Q96N95 335 aaPredicted RBP8.52□□□□□ -1.05
SPG11-204ENST00000557866 KCTD15Q96SI1 283 aaPredicted RBP8.52□□□□□ -1.05
SPG11-204ENST00000557866 EHD4Q9H223 541 aa8.52□□□□□ -1.05
SPG11-204ENST00000557866 TAOK3Q9H2K8 898 aa8.52□□□□□ -1.05
SPG11-204ENST00000557866 PGPEP1Q9NXJ5 209 aa8.52□□□□□ -1.05
SPG11-204ENST00000557866 MTMR4Q9NYA4 1195 aa8.52□□□□□ -1.05
SPG11-204ENST00000557866 RTEL1Q9NZ71 1219 aa8.52□□□□□ -1.05
SPG11-204ENST00000557866 SWAP70Q9UH65 585 aa8.52□□□□□ -1.05
SPG11-204ENST00000557866 MAD2L2Q9UI95 211 aa8.52□□□□□ -1.05
SPG11-204ENST00000557866 CFAP45Q9UL16 551 aa8.52□□□□□ -1.05
SPG11-204ENST00000557866 BCS1LQ9Y276 419 aa8.52□□□□□ -1.05
SPG11-204ENST00000557866 CLIC4Q9Y696 253 aa8.52□□□□□ -1.05
SPG11-204ENST00000557866 LAMB1P07942 1786 aa8.52□□□□□ -1.05
SPG11-204ENST00000557866 ADAMTSL1Q8N6G6 1762 aa8.52□□□□□ -1.05
SPG11-204ENST00000557866 MYO3BQ8WXR4 1341 aa8.52□□□□□ -1.05
SPG11-204ENST00000557866 NAV1Q8NEY1 1877 aa8.51□□□□□ -1.05
SPG11-204ENST00000557866 SHTN1A0MZ66 631 aa8.51□□□□□ -1.05
SPG11-204ENST00000557866 FAM196BA6NMK8 535 aa8.51□□□□□ -1.05
SPG11-204ENST00000557866 BTBD18B2RXH4 712 aa8.51□□□□□ -1.05
SPG11-204ENST00000557866 CYTH3O43739 400 aa8.51□□□□□ -1.05
SPG11-204ENST00000557866 ENTPD3O75355 529 aa8.51□□□□□ -1.05
SPG11-204ENST00000557866 HLA-DOAP06340 250 aa8.51□□□□□ -1.05
SPG11-204ENST00000557866 TOP1P11387 765 aaKnown RBP8.51□□□□□ -1.05
SPG11-204ENST00000557866 BMP2P12643 396 aa8.51□□□□□ -1.05
SPG11-204ENST00000557866 NASPP49321 788 aaPredicted RBP8.51□□□□□ -1.05
SPG11-204ENST00000557866 RASSF7Q02833 373 aa8.51□□□□□ -1.05
SPG11-204ENST00000557866 DHX9Q08211 1270 aaKnown RBP8.51□□□□□ -1.05
SPG11-204ENST00000557866 RRP1BQ14684 758 aaKnown RBP8.51□□□□□ -1.05
SPG11-204ENST00000557866 NPY5RQ15761 445 aa8.51□□□□□ -1.05
SPG11-204ENST00000557866 C6orf118Q5T5N4 469 aa8.51□□□□□ -1.05
SPG11-204ENST00000557866 CLEC10AQ8IUN9 316 aa8.51□□□□□ -1.05
SPG11-204ENST00000557866 MEIOBQ8N635 442 aa8.51□□□□□ -1.05
SPG11-204ENST00000557866 MTMR14Q8NCE2 650 aa8.51□□□□□ -1.05
SPG11-204ENST00000557866 LINC00301Q8NCQ3 95 aa8.51□□□□□ -1.05
SPG11-204ENST00000557866 CTCFLQ8NI51 663 aaPredicted RBP8.51□□□□□ -1.05
SPG11-204ENST00000557866 ADAM32Q8TC27 787 aa8.51□□□□□ -1.05
SPG11-204ENST00000557866 OCSTAMPQ9BR26 566 aa8.51□□□□□ -1.05
SPG11-204ENST00000557866 TSEN34Q9BSV6 310 aaKnown RBP8.51□□□□□ -1.05
SPG11-204ENST00000557866 DHX36Q9H2U1 1008 aaKnown RBP8.51□□□□□ -1.05
SPG11-204ENST00000557866 HMX1Q9NP08 348 aaPredicted RBP8.51□□□□□ -1.05
SPG11-204ENST00000557866 VPS54Q9P1Q0 977 aa8.51□□□□□ -1.05
SPG11-204ENST00000557866 PI4KBQ9UBF8 816 aa8.51□□□□□ -1.05
SPG11-204ENST00000557866 ZNF70Q9UC06 446 aaPredicted RBP8.51□□□□□ -1.05
SPG11-204ENST00000557866 STX8Q9UNK0 236 aa8.51□□□□□ -1.05
SPG11-204ENST00000557866 CLRN2A0PK11 232 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 SYCE3A1L190 88 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 GOLGA6L3A6NEY3 463 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 ADAMTS3O15072 1205 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 KIF5BP33176 963 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 GNAQP50148 359 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 TOB1P50616 345 aaPredicted RBP8.5□□□□□ -1.05
SPG11-204ENST00000557866 JAG1P78504 1218 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 AKAP17AQ02040 695 aaKnown RBP8.5□□□□□ -1.05
SPG11-204ENST00000557866 TRIM29Q14134 588 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 PTPAQ15257 358 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 DLGAP5Q15398 846 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 CCDC183Q5T5S1 534 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 PPP1R26Q5T8A7 1209 aaPredicted RBP8.5□□□□□ -1.05
SPG11-204ENST00000557866 ANO1Q5XXA6 986 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 CIAPIN1Q6FI81 312 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 TATDN1Q6P1N9 297 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 USP17L2Q6R6M4 530 aa8.5□□□□□ -1.05
SPG11-204ENST00000557866 DIS3L2Q8IYB7 885 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms