RNA–Protein interactions for RNA: ENST00000557592.5

APEX1-220, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-220ENST00000557592 PCDHA1Q9Y5I3 950 aa13.14□□□□□ -0.31
APEX1-220ENST00000557592 V9GY48 417 aaPredicted RBP13.14□□□□□ -0.31
APEX1-220ENST00000557592 ABCB11O95342 1321 aa13.13□□□□□ -0.31
APEX1-220ENST00000557592 ZNFX1Q9P2E3 1918 aaKnown RBP13.13□□□□□ -0.31
APEX1-220ENST00000557592 SLC15A5A6NIM6 579 aa13.13□□□□□ -0.31
APEX1-220ENST00000557592 PTPREP23469 700 aa13.13□□□□□ -0.31
APEX1-220ENST00000557592 PRKCZQ05513 592 aa13.13□□□□□ -0.31
APEX1-220ENST00000557592 KCTD2Q14681 263 aa13.13□□□□□ -0.31
APEX1-220ENST00000557592 CPLX2Q6PUV4 134 aaKnown RBP13.13□□□□□ -0.31
APEX1-220ENST00000557592 SOCS4Q8WXH5 440 aa13.13□□□□□ -0.31
APEX1-220ENST00000557592 PHKBQ93100 1093 aa13.13□□□□□ -0.31
APEX1-220ENST00000557592 ZSCAN31Q96LW9 406 aaPredicted RBP13.13□□□□□ -0.31
APEX1-220ENST00000557592 SRRDQ9UH36 339 aa13.13□□□□□ -0.31
APEX1-220ENST00000557592 GABRQQ9UN88 632 aa13.13□□□□□ -0.31
APEX1-220ENST00000557592 ZNF236Q9UL36 1845 aa13.12□□□□□ -0.31
APEX1-220ENST00000557592 NFIBO00712 420 aa13.12□□□□□ -0.31
APEX1-220ENST00000557592 STRNO43815 780 aa13.12□□□□□ -0.31
APEX1-220ENST00000557592 CD2BP2O95400 341 aaKnown RBP13.12□□□□□ -0.31
APEX1-220ENST00000557592 IFNAR1P17181 557 aa13.12□□□□□ -0.31
APEX1-220ENST00000557592 ADORA2AP29274 412 aa13.12□□□□□ -0.31
APEX1-220ENST00000557592 AKAP17AQ02040 695 aaKnown RBP13.12□□□□□ -0.31
APEX1-220ENST00000557592 TRAF1Q13077 416 aa13.12□□□□□ -0.31
APEX1-220ENST00000557592 GRB14Q14449 540 aa13.12□□□□□ -0.31
APEX1-220ENST00000557592 NTRK3Q16288 839 aa13.12□□□□□ -0.31
APEX1-220ENST00000557592 MORN1Q5T089 497 aa13.12□□□□□ -0.31
APEX1-220ENST00000557592 NSMFQ6X4W1 530 aa13.12□□□□□ -0.31
APEX1-220ENST00000557592 HEATR3Q7Z4Q2 680 aa13.12□□□□□ -0.31
APEX1-220ENST00000557592 ABRAQ8N0Z2 381 aa13.12□□□□□ -0.31
APEX1-220ENST00000557592 ANKRD35Q8N283 1001 aa13.12□□□□□ -0.31
APEX1-220ENST00000557592 GTF3C6Q969F1 213 aa13.12□□□□□ -0.31
APEX1-220ENST00000557592 NUDT12Q9BQG2 462 aa13.12□□□□□ -0.31
APEX1-220ENST00000557592 SLC26A6Q9BXS9 759 aa13.12□□□□□ -0.31
APEX1-220ENST00000557592 SH2B1Q9NRF2 756 aaPredicted RBP13.12□□□□□ -0.31
APEX1-220ENST00000557592 MRPL11Q9Y3B7 192 aaKnown RBP13.12□□□□□ -0.31
APEX1-220ENST00000557592 HTTP42858 3142 aa13.12□□□□□ -0.31
APEX1-220ENST00000557592 RBBP6Q7Z6E9 1792 aaKnown RBP13.12□□□□□ -0.31
APEX1-220ENST00000557592 CDKL5O76039 1030 aa13.11□□□□□ -0.31
APEX1-220ENST00000557592 PGK2P07205 417 aa13.11□□□□□ -0.31
APEX1-220ENST00000557592 CYP2B6P20813 491 aa13.11□□□□□ -0.31
APEX1-220ENST00000557592 FLT3LGP49771 235 aa13.11□□□□□ -0.31
APEX1-220ENST00000557592 PRMT2P55345 433 aa13.11□□□□□ -0.31
APEX1-220ENST00000557592 SSRP1Q08945 709 aaKnown RBP13.11□□□□□ -0.31
APEX1-220ENST00000557592 MAP2K5Q13163 448 aa13.11□□□□□ -0.31
APEX1-220ENST00000557592 DPP9Q86TI2 863 aa13.11□□□□□ -0.31
APEX1-220ENST00000557592 TRIM22Q8IYM9 498 aa13.11□□□□□ -0.31
APEX1-220ENST00000557592 RAET1EQ8TD07 263 aa13.11□□□□□ -0.31
APEX1-220ENST00000557592 CLEC4DQ8WXI8 215 aa13.11□□□□□ -0.31
APEX1-220ENST00000557592 GPKOWQ92917 476 aaPredicted RBP eCLIP13.11□□□□□ -0.319e-8■■■□□ 15.2
APEX1-220ENST00000557592 DDX11Q96FC9 970 aa13.11□□□□□ -0.31
APEX1-220ENST00000557592 A1CFQ9NQ94 594 aaKnown RBP13.11□□□□□ -0.31
APEX1-220ENST00000557592 RBM27Q9P2N5 1060 aaKnown RBP13.11□□□□□ -0.31
APEX1-220ENST00000557592 GJD2Q9UKL4 321 aa13.11□□□□□ -0.31
APEX1-220ENST00000557592 PFASO15067 1338 aa13.11□□□□□ -0.31
APEX1-220ENST00000557592 PLXNA1Q9UIW2 1896 aa13.1□□□□□ -0.31
APEX1-220ENST00000557592 PTPDC1A2A3K4 754 aa13.1□□□□□ -0.31
APEX1-220ENST00000557592 PRPF3O43395 683 aaKnown RBP13.1□□□□□ -0.31
APEX1-220ENST00000557592 DTNBO60941 627 aa13.1□□□□□ -0.31
APEX1-220ENST00000557592 RGS2P41220 211 aa13.1□□□□□ -0.31
APEX1-220ENST00000557592 MCM2P49736 904 aa13.1□□□□□ -0.31
APEX1-220ENST00000557592 PFKFB3Q16875 520 aaPredicted RBP13.1□□□□□ -0.31
APEX1-220ENST00000557592 WWC2Q6AWC2 1192 aa13.1□□□□□ -0.31
APEX1-220ENST00000557592 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.1□□□□□ -0.31
APEX1-220ENST00000557592 MCF2L2Q86YR7 1114 aa13.1□□□□□ -0.31
APEX1-220ENST00000557592 CCDC83Q8IWF9 413 aa13.1□□□□□ -0.31
APEX1-220ENST00000557592 USP6NLQ92738 828 aa13.1□□□□□ -0.31
APEX1-220ENST00000557592 RNF26Q9BY78 433 aaPredicted RBP13.1□□□□□ -0.31
APEX1-220ENST00000557592 SLC5A4Q9NY91 659 aa13.1□□□□□ -0.31
APEX1-220ENST00000557592 CYP39A1Q9NYL5 469 aa13.1□□□□□ -0.31
APEX1-220ENST00000557592 PTPN22Q9Y2R2 807 aa13.1□□□□□ -0.31
APEX1-220ENST00000557592 PTCH2Q9Y6C5 1203 aa13.1□□□□□ -0.31
APEX1-220ENST00000557592 hCG_1984214I3L0E3 225 aa13.09□□□□□ -0.31
APEX1-220ENST00000557592 COBLO75128 1261 aa13.09□□□□□ -0.31
APEX1-220ENST00000557592 CTDNEP1O95476 244 aa13.09□□□□□ -0.31
APEX1-220ENST00000557592 CFBP00751 764 aa13.09□□□□□ -0.31
APEX1-220ENST00000557592 SCG2P13521 617 aa13.09□□□□□ -0.31
APEX1-220ENST00000557592 NAPAP54920 295 aa13.09□□□□□ -0.31
APEX1-220ENST00000557592 ST3GAL1Q11201 340 aa13.09□□□□□ -0.31
APEX1-220ENST00000557592 BAATQ14032 418 aaPredicted RBP13.09□□□□□ -0.31
APEX1-220ENST00000557592 PKN1Q16512 942 aa13.09□□□□□ -0.31
APEX1-220ENST00000557592 PKN2Q16513 984 aaKnown RBP13.09□□□□□ -0.31
APEX1-220ENST00000557592 SLC30A10Q6XR72 485 aa13.09□□□□□ -0.31
APEX1-220ENST00000557592 RNF207Q6ZRF8 634 aa13.09□□□□□ -0.31
APEX1-220ENST00000557592 ZNF713Q8N859 430 aaPredicted RBP13.09□□□□□ -0.31
APEX1-220ENST00000557592 TMX3Q96JJ7 454 aa13.09□□□□□ -0.31
APEX1-220ENST00000557592 APBA2Q99767 749 aa13.09□□□□□ -0.31
APEX1-220ENST00000557592 POTEB2H3BUK9 544 aa13.08□□□□□ -0.32
APEX1-220ENST00000557592 STXBP3O00186 592 aa13.08□□□□□ -0.32
APEX1-220ENST00000557592 OPLAHO14841 1288 aa13.08□□□□□ -0.32
APEX1-220ENST00000557592 ADCY3O60266 1144 aa13.08□□□□□ -0.32
APEX1-220ENST00000557592 XRCC5P13010 732 aaKnown RBP13.08□□□□□ -0.32
APEX1-220ENST00000557592 CALML3P27482 149 aa13.08□□□□□ -0.32
APEX1-220ENST00000557592 CNTN2Q02246 1040 aa13.08□□□□□ -0.32
APEX1-220ENST00000557592 IRF5Q13568 498 aa13.08□□□□□ -0.32
APEX1-220ENST00000557592 FBXO46Q6PJ61 603 aaPredicted RBP13.08□□□□□ -0.32
APEX1-220ENST00000557592 RGS22Q8NE09 1264 aa13.08□□□□□ -0.32
APEX1-220ENST00000557592 NSUN7Q8NE18 718 aaKnown RBP13.08□□□□□ -0.32
APEX1-220ENST00000557592 NPLOC4Q8TAT6 608 aa13.08□□□□□ -0.32
APEX1-220ENST00000557592 TBC1D5Q92609 795 aa13.08□□□□□ -0.32
APEX1-220ENST00000557592 BARHL2Q9NY43 387 aa13.08□□□□□ -0.32
APEX1-220ENST00000557592 LCTP09848 1927 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms