RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	DDX49	Q9Y6V7	483 aa	Known RBP	13.28	□□□□□ -0.28
HNRNPC-231	ENST00000557336	MYH4	Q9Y623	1939 aa		13.27	□□□□□ -0.28
HNRNPC-231	ENST00000557336	SOWAHB	A6NEL2	793 aa		13.27	□□□□□ -0.29
HNRNPC-231	ENST00000557336	ERC2	O15083	957 aa		13.27	□□□□□ -0.29
HNRNPC-231	ENST00000557336	PQBP1	O60828	265 aa	Known RBP	13.27	□□□□□ -0.29
HNRNPC-231	ENST00000557336	TSPY3	P0CV98	308 aa		13.27	□□□□□ -0.29
HNRNPC-231	ENST00000557336	TSPY8	P0CW00	308 aa		13.27	□□□□□ -0.29
HNRNPC-231	ENST00000557336	PTGS1	P23219	599 aa		13.27	□□□□□ -0.29
HNRNPC-231	ENST00000557336	MCC	P23508	829 aa		13.27	□□□□□ -0.29
HNRNPC-231	ENST00000557336	CST5	P28325	142 aa	Predicted RBP	13.27	□□□□□ -0.29
HNRNPC-231	ENST00000557336	SNAP25	P60880	206 aa		13.27	□□□□□ -0.29
HNRNPC-231	ENST00000557336	CCDC144B	Q3MJ40	725 aa		13.27	□□□□□ -0.29
HNRNPC-231	ENST00000557336	ANKRD35	Q8N283	1001 aa		13.27	□□□□□ -0.29
HNRNPC-231	ENST00000557336	TOX2	Q96NM4	488 aa		13.27	□□□□□ -0.29
HNRNPC-231	ENST00000557336	NACAP1	Q9BZK3	213 aa		13.27	□□□□□ -0.29
HNRNPC-231	ENST00000557336	UPF3A	Q9H1J1	476 aa	Known RBP	13.27	□□□□□ -0.29
HNRNPC-231	ENST00000557336	SEMA6B	Q9H3T3	888 aa		13.27	□□□□□ -0.29
HNRNPC-231	ENST00000557336	A1CF	Q9NQ94	594 aa	Known RBP	13.27	□□□□□ -0.29
HNRNPC-231	ENST00000557336	ANAPC4	Q9UJX5	808 aa		13.27	□□□□□ -0.29
HNRNPC-231	ENST00000557336	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.27	□□□□□ -0.29
HNRNPC-231	ENST00000557336	PLA2G6	O60733	806 aa		13.26	□□□□□ -0.29
HNRNPC-231	ENST00000557336	FGR	P09769	529 aa		13.26	□□□□□ -0.29
HNRNPC-231	ENST00000557336	RRP1	P56182	461 aa	Known RBP	13.26	□□□□□ -0.29
HNRNPC-231	ENST00000557336	GJA9	P57773	515 aa		13.26	□□□□□ -0.29
HNRNPC-231	ENST00000557336	NKX3-2	P78367	333 aa		13.26	□□□□□ -0.29
HNRNPC-231	ENST00000557336	MUC3A	Q02505	3323 aa		13.26	□□□□□ -0.29
HNRNPC-231	ENST00000557336	PDE4B	Q07343	736 aa		13.26	□□□□□ -0.29
HNRNPC-231	ENST00000557336	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.26	□□□□□ -0.29
HNRNPC-231	ENST00000557336	TMEM63B	Q5T3F8	832 aa		13.26	□□□□□ -0.29
HNRNPC-231	ENST00000557336	C16orf59	Q7L2K0	433 aa		13.26	□□□□□ -0.29
HNRNPC-231	ENST00000557336	ARMCX2	Q7L311	632 aa		13.26	□□□□□ -0.29
HNRNPC-231	ENST00000557336	CCDC144CP	Q8IYA2	1237 aa		13.26	□□□□□ -0.29
HNRNPC-231	ENST00000557336	STAG1	Q8WVM7	1258 aa		13.26	□□□□□ -0.29
HNRNPC-231	ENST00000557336	CDX2	Q99626	313 aa	Predicted RBP	13.26	□□□□□ -0.29
HNRNPC-231	ENST00000557336	ABHD16B	Q9H3Z7	469 aa		13.26	□□□□□ -0.29
HNRNPC-231	ENST00000557336	HOMER2	Q9NSB8	354 aa		13.26	□□□□□ -0.29
HNRNPC-231	ENST00000557336	FBXO40	Q9UH90	709 aa		13.26	□□□□□ -0.29
HNRNPC-231	ENST00000557336	TBX21	Q9UL17	535 aa		13.26	□□□□□ -0.29
HNRNPC-231	ENST00000557336	MCM3AP	O60318	1980 aa		13.25	□□□□□ -0.29
HNRNPC-231	ENST00000557336	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.25	□□□□□ -0.29
HNRNPC-231	ENST00000557336	MOXD2P	A6NHM9	499 aa		13.25	□□□□□ -0.29
HNRNPC-231	ENST00000557336	ASGR1	P07306	291 aa		13.25	□□□□□ -0.29
HNRNPC-231	ENST00000557336	STAT2	P52630	851 aa		13.25	□□□□□ -0.29
HNRNPC-231	ENST00000557336	SMAD3	P84022	425 aa	Known RBP	13.25	□□□□□ -0.29
HNRNPC-231	ENST00000557336	ALX1	Q15699	326 aa		13.25	□□□□□ -0.29
HNRNPC-231	ENST00000557336	MUM1L1	Q5H9M0	696 aa		13.25	□□□□□ -0.29
HNRNPC-231	ENST00000557336	RCSD1	Q6JBY9	416 aa		13.25	□□□□□ -0.29
HNRNPC-231	ENST00000557336	KCTD1	Q719H9	257 aa		13.25	□□□□□ -0.29
HNRNPC-231	ENST00000557336	FAM227B	Q96M60	508 aa		13.25	□□□□□ -0.29
HNRNPC-231	ENST00000557336	PURB	Q96QR8	312 aa	Known RBP	13.25	□□□□□ -0.29
HNRNPC-231	ENST00000557336	CRBN	Q96SW2	442 aa		13.25	□□□□□ -0.29
HNRNPC-231	ENST00000557336	STARD7	Q9NQZ5	370 aa		13.25	□□□□□ -0.29
HNRNPC-231	ENST00000557336	RNF146	Q9NTX7	359 aa		13.25	□□□□□ -0.29
HNRNPC-231	ENST00000557336	TMEM39A	Q9NV64	488 aa		13.25	□□□□□ -0.29
HNRNPC-231	ENST00000557336	PRR12	Q9ULL5	1215 aa		13.25	□□□□□ -0.29
HNRNPC-231	ENST00000557336	ELP1	O95163	1332 aa		13.24	□□□□□ -0.29
HNRNPC-231	ENST00000557336	ORC4	O43929	436 aa		13.24	□□□□□ -0.29
HNRNPC-231	ENST00000557336	C6orf222	P0C671	652 aa	Predicted RBP	13.24	□□□□□ -0.29
HNRNPC-231	ENST00000557336	FDX1	P10109	184 aa		13.24	□□□□□ -0.29
HNRNPC-231	ENST00000557336	RAG1	P15918	1043 aa		13.24	□□□□□ -0.29
HNRNPC-231	ENST00000557336	SLC1A4	P43007	532 aa		13.24	□□□□□ -0.29
HNRNPC-231	ENST00000557336	PDE1A	P54750	535 aa		13.24	□□□□□ -0.29
HNRNPC-231	ENST00000557336	ANKRD45	Q5TZF3	282 aa		13.24	□□□□□ -0.29
HNRNPC-231	ENST00000557336	FAM160B2	Q86V87	743 aa		13.24	□□□□□ -0.29
HNRNPC-231	ENST00000557336	CHURC1	Q8WUH1	139 aa		13.24	□□□□□ -0.29
HNRNPC-231	ENST00000557336	ACAD9	Q9H845	621 aa		13.24	□□□□□ -0.29
HNRNPC-231	ENST00000557336	STX8	Q9UNK0	236 aa		13.24	□□□□□ -0.29
HNRNPC-231	ENST00000557336	GNE	Q9Y223	722 aa	Known RBP	13.24	□□□□□ -0.29
HNRNPC-231	ENST00000557336	GRIN2D	O15399	1336 aa		13.23	□□□□□ -0.29
HNRNPC-231	ENST00000557336		A0A0D9SFI3	127 aa		13.23	□□□□□ -0.29
HNRNPC-231	ENST00000557336	TIMP1	P01033	207 aa		13.23	□□□□□ -0.29
HNRNPC-231	ENST00000557336	FGA	P02671	866 aa		13.23	□□□□□ -0.29
HNRNPC-231	ENST00000557336	SLC3A2	P08195	630 aa	Known RBP	13.23	□□□□□ -0.29
HNRNPC-231	ENST00000557336	BEX3	Q00994	111 aa		13.23	□□□□□ -0.29
HNRNPC-231	ENST00000557336	HDAC1	Q13547	482 aa	Predicted RBP	13.23	□□□□□ -0.29
HNRNPC-231	ENST00000557336	ZNF697	Q5TEC3	545 aa		13.23	□□□□□ -0.29
HNRNPC-231	ENST00000557336	TTBK2	Q6IQ55	1244 aa		13.23	□□□□□ -0.29
HNRNPC-231	ENST00000557336	TAPT1	Q6NXT6	567 aa		13.23	□□□□□ -0.29
HNRNPC-231	ENST00000557336	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.23	□□□□□ -0.29
HNRNPC-231	ENST00000557336	SPRYD3	Q8NCJ5	442 aa		13.23	□□□□□ -0.29
HNRNPC-231	ENST00000557336	NUP133	Q8WUM0	1156 aa		13.23	□□□□□ -0.29
HNRNPC-231	ENST00000557336	EVI5L	Q96CN4	794 aa		13.23	□□□□□ -0.29
HNRNPC-231	ENST00000557336	TRERF1	Q96PN7	1200 aa		13.23	□□□□□ -0.29
HNRNPC-231	ENST00000557336	PDGFC	Q9NRA1	345 aa		13.23	□□□□□ -0.29
HNRNPC-231	ENST00000557336	CYP39A1	Q9NYL5	469 aa		13.23	□□□□□ -0.29
HNRNPC-231	ENST00000557336	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.23	□□□□□ -0.29
HNRNPC-231	ENST00000557336	TSPY2	A6NKD2	308 aa		13.22	□□□□□ -0.29
HNRNPC-231	ENST00000557336	DCDC2C	A8MYV0	355 aa		13.22	□□□□□ -0.29
HNRNPC-231	ENST00000557336	ARVCF	O00192	962 aa		13.22	□□□□□ -0.29
HNRNPC-231	ENST00000557336	CD4	P01730	458 aa		13.22	□□□□□ -0.29
HNRNPC-231	ENST00000557336	ALAS1	P13196	640 aa		13.22	□□□□□ -0.29
HNRNPC-231	ENST00000557336	FPGS	Q05932	587 aa		13.22	□□□□□ -0.29
HNRNPC-231	ENST00000557336	GNAS	Q5JWF2	1037 aa		13.22	□□□□□ -0.29
HNRNPC-231	ENST00000557336	RASIP1	Q5U651	963 aa		13.22	□□□□□ -0.29
HNRNPC-231	ENST00000557336	CCDC174	Q6PII3	467 aa		13.22	□□□□□ -0.29
HNRNPC-231	ENST00000557336	BTNL9	Q6UXG8	535 aa		13.22	□□□□□ -0.29
HNRNPC-231	ENST00000557336	FAM126B	Q8IXS8	530 aa		13.22	□□□□□ -0.29
HNRNPC-231	ENST00000557336	SLC43A3	Q8NBI5	491 aa		13.22	□□□□□ -0.29
HNRNPC-231	ENST00000557336	RNPC3	Q96LT9	517 aa	Known RBP	13.22	□□□□□ -0.29
HNRNPC-231	ENST00000557336	GLT1D1	Q96MS3	346 aa		13.22	□□□□□ -0.29

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