RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 PTPDC1A2A3K4 754 aa19.36■□□□□ 0.69
VSX1-207ENST00000557285 BAATQ14032 418 aaPredicted RBP19.36■□□□□ 0.69
VSX1-207ENST00000557285 EEPD1Q7L9B9 569 aa19.36■□□□□ 0.69
VSX1-207ENST00000557285 ANKS1AQ92625 1134 aa19.36■□□□□ 0.69
VSX1-207ENST00000557285 CCDC136Q96JN2 1154 aa19.36■□□□□ 0.69
VSX1-207ENST00000557285 VAT1LQ9HCJ6 419 aa19.36■□□□□ 0.69
VSX1-207ENST00000557285 ATP11BQ9Y2G3 1177 aa19.36■□□□□ 0.69
VSX1-207ENST00000557285 MYH6P13533 1939 aa19.35■□□□□ 0.69
VSX1-207ENST00000557285 E7EWF7 191 aa19.35■□□□□ 0.69
VSX1-207ENST00000557285 PARP1P09874 1014 aaKnown RBP19.35■□□□□ 0.69
VSX1-207ENST00000557285 CALML3P27482 149 aa19.35■□□□□ 0.69
VSX1-207ENST00000557285 RTP1P59025 263 aa19.35■□□□□ 0.69
VSX1-207ENST00000557285 CCDC144BQ3MJ40 725 aa19.35■□□□□ 0.69
VSX1-207ENST00000557285 ASPRV1Q53RT3 343 aa19.35■□□□□ 0.69
VSX1-207ENST00000557285 SLC30A10Q6XR72 485 aa19.35■□□□□ 0.69
VSX1-207ENST00000557285 STOX1Q6ZVD7 989 aa19.35■□□□□ 0.69
VSX1-207ENST00000557285 NOL8Q76FK4 1167 aaKnown RBP19.35■□□□□ 0.69
VSX1-207ENST00000557285 RNF180Q86T96 592 aa19.35■□□□□ 0.69
VSX1-207ENST00000557285 ABHD16BQ9H3Z7 469 aa19.35■□□□□ 0.69
VSX1-207ENST00000557285 ASTN1O14525 1302 aa19.34■□□□□ 0.69
VSX1-207ENST00000557285 SYNRGQ9UMZ2 1314 aa19.34■□□□□ 0.69
VSX1-207ENST00000557285 IFIT3O14879 490 aaKnown RBP19.34■□□□□ 0.69
VSX1-207ENST00000557285 IRX5P78411 483 aaPredicted RBP19.34■□□□□ 0.69
VSX1-207ENST00000557285 CDC37Q16543 378 aaPredicted RBP19.34■□□□□ 0.69
VSX1-207ENST00000557285 ADGRF4Q8IZF3 695 aa19.34■□□□□ 0.69
VSX1-207ENST00000557285 MAP4K1Q92918 833 aa19.34■□□□□ 0.69
VSX1-207ENST00000557285 ESYT1Q9BSJ8 1104 aa19.34■□□□□ 0.69
VSX1-207ENST00000557285 ERICH2A1L162 156 aa19.33■□□□□ 0.68
VSX1-207ENST00000557285 MYADML2A6NDP7 307 aa19.33■□□□□ 0.68
VSX1-207ENST00000557285 ASB14A6NK59 587 aa19.33■□□□□ 0.68
VSX1-207ENST00000557285 ADCY6O43306 1168 aa19.33■□□□□ 0.68
VSX1-207ENST00000557285 C6orf222P0C671 652 aaPredicted RBP19.33■□□□□ 0.68
VSX1-207ENST00000557285 SEC23AQ15436 765 aa19.33■□□□□ 0.68
VSX1-207ENST00000557285 TRIM60Q495X7 471 aa19.33■□□□□ 0.68
VSX1-207ENST00000557285 SLC39A5Q6ZMH5 540 aa19.33■□□□□ 0.68
VSX1-207ENST00000557285 FBXO16Q8IX29 292 aaPredicted RBP19.33■□□□□ 0.68
VSX1-207ENST00000557285 NCOA7Q8NI08 942 aa19.33■□□□□ 0.68
VSX1-207ENST00000557285 CLEC4DQ8WXI8 215 aa19.33■□□□□ 0.68
VSX1-207ENST00000557285 SENP2Q9HC62 589 aa19.33■□□□□ 0.68
VSX1-207ENST00000557285 ANO2Q9NQ90 1003 aa19.33■□□□□ 0.68
VSX1-207ENST00000557285 LRRC37A2A6NM11 1700 aa19.33■□□□□ 0.68
VSX1-207ENST00000557285 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.32■□□□□ 0.68
VSX1-207ENST00000557285 ADAMTS4O75173 837 aa19.32■□□□□ 0.68
VSX1-207ENST00000557285 SLC34A2O95436 690 aa19.32■□□□□ 0.68
VSX1-207ENST00000557285 PTGS1P23219 599 aa19.32■□□□□ 0.68
VSX1-207ENST00000557285 MAGEA10P43363 369 aaPredicted RBP19.32■□□□□ 0.68
VSX1-207ENST00000557285 MDM2Q00987 491 aaPredicted RBP19.32■□□□□ 0.68
VSX1-207ENST00000557285 RNF207Q6ZRF8 634 aa19.32■□□□□ 0.68
VSX1-207ENST00000557285 STAG2Q8N3U4 1231 aa19.32■□□□□ 0.68
VSX1-207ENST00000557285 PRDM5Q9NQX1 630 aaPredicted RBP19.32■□□□□ 0.68
VSX1-207ENST00000557285 WDR19Q8NEZ3 1342 aa19.31■□□□□ 0.68
VSX1-207ENST00000557285 DUSP11O75319 330 aaKnown RBP19.31■□□□□ 0.68
VSX1-207ENST00000557285 WTAPQ15007 396 aa19.31■□□□□ 0.68
VSX1-207ENST00000557285 SART3Q15020 963 aaKnown RBP19.31■□□□□ 0.68
VSX1-207ENST00000557285 QRICH1Q2TAL8 776 aa19.31■□□□□ 0.68
VSX1-207ENST00000557285 BMP2KLQ5H9B9 411 aa19.31■□□□□ 0.68
VSX1-207ENST00000557285 TMEM67Q5HYA8 995 aa19.31■□□□□ 0.68
VSX1-207ENST00000557285 KATNBL1Q9H079 304 aa19.31■□□□□ 0.68
VSX1-207ENST00000557285 LSG1Q9H089 658 aaKnown RBP19.31■□□□□ 0.68
VSX1-207ENST00000557285 PDGFCQ9NRA1 345 aa19.31■□□□□ 0.68
VSX1-207ENST00000557285 PHF24Q9UPV7 400 aa19.31■□□□□ 0.68
VSX1-207ENST00000557285 A0A1W2PQ45 241 aaPredicted RBP19.3■□□□□ 0.68
VSX1-207ENST00000557285 A0A1W2PQY0 241 aa19.3■□□□□ 0.68
VSX1-207ENST00000557285 NEFLP07196 543 aa19.3■□□□□ 0.68
VSX1-207ENST00000557285 FXR1P51114 621 aaKnown RBP eCLIP19.3■□□□□ 0.68
VSX1-207ENST00000557285 ALDH5A1P51649 535 aaPredicted RBP19.3■□□□□ 0.68
VSX1-207ENST00000557285 RPS6P62753 249 aaKnown RBP19.3■□□□□ 0.68
VSX1-207ENST00000557285 TNFAIP2Q03169 654 aa19.3■□□□□ 0.68
VSX1-207ENST00000557285 KCNA10Q16322 511 aa19.3■□□□□ 0.68
VSX1-207ENST00000557285 SPC25Q9HBM1 224 aa19.3■□□□□ 0.68
VSX1-207ENST00000557285 PRKAG2Q9UGJ0 569 aa19.3■□□□□ 0.68
VSX1-207ENST00000557285 PNMA2Q9UL42 364 aa19.3■□□□□ 0.68
VSX1-207ENST00000557285 KLRF2D3W0D1 207 aa19.29■□□□□ 0.68
VSX1-207ENST00000557285 ACLYP53396 1101 aa19.29■□□□□ 0.68
VSX1-207ENST00000557285 ANTXR2P58335 489 aa19.29■□□□□ 0.68
VSX1-207ENST00000557285 VTI1AQ96AJ9 217 aa19.29■□□□□ 0.68
VSX1-207ENST00000557285 PRO3102Q9H379 93 aa19.29■□□□□ 0.68
VSX1-207ENST00000557285 JMJD4Q9H9V9 463 aa19.29■□□□□ 0.68
VSX1-207ENST00000557285 GPHNQ9NQX3 736 aaPredicted RBP19.29■□□□□ 0.68
VSX1-207ENST00000557285 ADD3Q9UEY8 706 aaKnown RBP19.29■□□□□ 0.68
VSX1-207ENST00000557285 BAZ2BQ9UIF8 2168 aaKnown RBP19.28■□□□□ 0.68
VSX1-207ENST00000557285 SLC27A2O14975 620 aa19.28■□□□□ 0.68
VSX1-207ENST00000557285 PQBP1O60828 265 aaKnown RBP19.28■□□□□ 0.68
VSX1-207ENST00000557285 BEX3Q00994 111 aa19.28■□□□□ 0.68
VSX1-207ENST00000557285 GNASQ5JWF2 1037 aa19.28■□□□□ 0.68
VSX1-207ENST00000557285 TLK2Q86UE8 772 aa19.28■□□□□ 0.68
VSX1-207ENST00000557285 FBXO11Q86XK2 927 aa19.28■□□□□ 0.68
VSX1-207ENST00000557285 HOMER1Q86YM7 354 aa19.28■□□□□ 0.68
VSX1-207ENST00000557285 MB21D2Q8IYB1 491 aaPredicted RBP19.28■□□□□ 0.68
VSX1-207ENST00000557285 KLHDC9Q8NEP7 349 aa19.28■□□□□ 0.68
VSX1-207ENST00000557285 PIBF1Q8WXW3 757 aa19.28■□□□□ 0.68
VSX1-207ENST00000557285 GDF15Q99988 308 aa19.28■□□□□ 0.68
VSX1-207ENST00000557285 LBHD1Q9BQE6 289 aaPredicted RBP19.28■□□□□ 0.68
VSX1-207ENST00000557285 UBE2OQ9C0C9 1292 aaKnown RBP19.28■□□□□ 0.68
VSX1-207ENST00000557285 MAD2L2Q9UI95 211 aa19.28■□□□□ 0.68
VSX1-207ENST00000557285 ABCB11O95342 1321 aa19.27■□□□□ 0.68
VSX1-207ENST00000557285 PRC1O43663 620 aa19.27■□□□□ 0.68
VSX1-207ENST00000557285 SMPD1P17405 629 aa19.27■□□□□ 0.68
VSX1-207ENST00000557285 PDE4DQ08499 809 aa19.27■□□□□ 0.68
VSX1-207ENST00000557285 TMEM63BQ5T3F8 832 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms