RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 MRPL41Q8IXM3 137 aaKnown RBP5.77□□□□□ -1.49
SRP54-212ENST00000556992 TRMT2AQ8IZ69 625 aaKnown RBP5.77□□□□□ -1.49
SRP54-212ENST00000556992 PPP1R13LQ8WUF5 828 aa5.77□□□□□ -1.49
SRP54-212ENST00000556992 ACSF2Q96CM8 615 aaPredicted RBP5.77□□□□□ -1.49
SRP54-212ENST00000556992 COG3Q96JB2 828 aa5.77□□□□□ -1.49
SRP54-212ENST00000556992 KRTAP17-1Q9BYP8 105 aa5.77□□□□□ -1.49
SRP54-212ENST00000556992 EBF1Q9UH73 591 aa5.77□□□□□ -1.49
SRP54-212ENST00000556992 PCDHA11Q9Y5I1 949 aa5.77□□□□□ -1.49
SRP54-212ENST00000556992 RIMS1Q86UR5 1692 aaKnown RBP5.77□□□□□ -1.49
SRP54-212ENST00000556992 A0A1W2PP64 1363 aa5.77□□□□□ -1.49
SRP54-212ENST00000556992 PIK3R4Q99570 1358 aa5.77□□□□□ -1.49
SRP54-212ENST00000556992 ROBO2Q9HCK4 1378 aa5.77□□□□□ -1.49
SRP54-212ENST00000556992 ZNF521Q96K83 1311 aa5.76□□□□□ -1.49
SRP54-212ENST00000556992 MED1Q15648 1581 aaPredicted RBP5.76□□□□□ -1.49
SRP54-212ENST00000556992 PREX1Q8TCU6 1659 aa5.76□□□□□ -1.49
SRP54-212ENST00000556992 ADAMTS13Q76LX8 1427 aa5.76□□□□□ -1.49
SRP54-212ENST00000556992 A0A0G2JLL6 359 aaPredicted RBP5.76□□□□□ -1.49
SRP54-212ENST00000556992 GIPC1O14908 333 aa5.76□□□□□ -1.49
SRP54-212ENST00000556992 LMNB1P20700 586 aa5.76□□□□□ -1.49
SRP54-212ENST00000556992 DLG4P78352 724 aa5.76□□□□□ -1.49
SRP54-212ENST00000556992 CCDC146Q8IYE0 955 aa5.76□□□□□ -1.49
SRP54-212ENST00000556992 TCP11L2Q8N4U5 519 aa5.76□□□□□ -1.49
SRP54-212ENST00000556992 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.76□□□□□ -1.49
SRP54-212ENST00000556992 PIWIL2Q8TC59 973 aaKnown RBP5.76□□□□□ -1.49
SRP54-212ENST00000556992 JARID2Q92833 1246 aaPredicted RBP5.76□□□□□ -1.49
SRP54-212ENST00000556992 RAPGEFL1Q9UHV5 662 aa5.76□□□□□ -1.49
SRP54-212ENST00000556992 ZNF335Q9H4Z2 1342 aaPredicted RBP5.75□□□□□ -1.49
SRP54-212ENST00000556992 TULP4Q9NRJ4 1543 aa5.75□□□□□ -1.49
SRP54-212ENST00000556992 MYO3AQ8NEV4 1616 aa5.75□□□□□ -1.49
SRP54-212ENST00000556992 F6X3S4 739 aa5.75□□□□□ -1.49
SRP54-212ENST00000556992 U2SURPO15042 1029 aaKnown RBP5.75□□□□□ -1.49
SRP54-212ENST00000556992 LDHBP07195 334 aaKnown RBP5.75□□□□□ -1.49
SRP54-212ENST00000556992 PDE6BP35913 854 aa5.75□□□□□ -1.49
SRP54-212ENST00000556992 ETV3P41162 512 aa5.75□□□□□ -1.49
SRP54-212ENST00000556992 LIG3P49916 1009 aa5.75□□□□□ -1.49
SRP54-212ENST00000556992 RRP1P56182 461 aaKnown RBP5.75□□□□□ -1.49
SRP54-212ENST00000556992 IRX6P78412 446 aaPredicted RBP5.75□□□□□ -1.49
SRP54-212ENST00000556992 SLC6A19Q695T7 634 aa5.75□□□□□ -1.49
SRP54-212ENST00000556992 ZSCAN29Q8IWY8 852 aaPredicted RBP5.75□□□□□ -1.49
SRP54-212ENST00000556992 SIRT2Q8IXJ6 389 aa5.75□□□□□ -1.49
SRP54-212ENST00000556992 DTWD2Q8NBA8 298 aa5.75□□□□□ -1.49
SRP54-212ENST00000556992 PDZD8Q8NEN9 1154 aa5.75□□□□□ -1.49
SRP54-212ENST00000556992 INTS4Q96HW7 963 aaKnown RBP5.75□□□□□ -1.49
SRP54-212ENST00000556992 COX4I2Q96KJ9 171 aa5.75□□□□□ -1.49
SRP54-212ENST00000556992 ASB16Q96NS5 453 aa5.75□□□□□ -1.49
SRP54-212ENST00000556992 ZCCHC4Q9H5U6 513 aa5.75□□□□□ -1.49
SRP54-212ENST00000556992 PARD6AQ9NPB6 346 aa5.75□□□□□ -1.49
SRP54-212ENST00000556992 POLKQ9UBT6 870 aa5.75□□□□□ -1.49
SRP54-212ENST00000556992 CEP131Q9UPN4 1083 aa5.75□□□□□ -1.49
SRP54-212ENST00000556992 TLR6Q9Y2C9 796 aa5.75□□□□□ -1.49
SRP54-212ENST00000556992 MED14O60244 1454 aa5.75□□□□□ -1.49
SRP54-212ENST00000556992 ARHGAP23Q9P227 1491 aa5.75□□□□□ -1.49
SRP54-212ENST00000556992 MROH2AA6NES4 1674 aa5.75□□□□□ -1.49
SRP54-212ENST00000556992 CLTCQ00610 1675 aaKnown RBP5.75□□□□□ -1.49
SRP54-212ENST00000556992 PPLO60437 1756 aa5.75□□□□□ -1.49
SRP54-212ENST00000556992 ACEP12821 1306 aa5.74□□□□□ -1.49
SRP54-212ENST00000556992 CPSF1Q10570 1443 aaKnown RBP5.74□□□□□ -1.49
SRP54-212ENST00000556992 PPIP5K1Q6PFW1 1433 aa5.74□□□□□ -1.49
SRP54-212ENST00000556992 POLR1AO95602 1720 aaPredicted RBP5.74□□□□□ -1.49
SRP54-212ENST00000556992 SHISA3A0PJX4 238 aa5.74□□□□□ -1.49
SRP54-212ENST00000556992 PPM1GO15355 546 aaPredicted RBP5.74□□□□□ -1.49
SRP54-212ENST00000556992 EFEMP2O95967 443 aa5.74□□□□□ -1.49
SRP54-212ENST00000556992 SRFP11831 508 aa5.74□□□□□ -1.49
SRP54-212ENST00000556992 KCNA6P17658 529 aa5.74□□□□□ -1.49
SRP54-212ENST00000556992 TFE3P19532 575 aaPredicted RBP5.74□□□□□ -1.49
SRP54-212ENST00000556992 SSPNQ14714 243 aa5.74□□□□□ -1.49
SRP54-212ENST00000556992 TSPYL5Q86VY4 417 aaPredicted RBP5.74□□□□□ -1.49
SRP54-212ENST00000556992 NME9Q86XW9 330 aa5.74□□□□□ -1.49
SRP54-212ENST00000556992 MCATQ8IVS2 390 aaKnown RBP5.74□□□□□ -1.49
SRP54-212ENST00000556992 NGDNQ8NEJ9 315 aaKnown RBP5.74□□□□□ -1.49
SRP54-212ENST00000556992 TRIT1Q9H3H1 467 aaKnown RBP5.74□□□□□ -1.49
SRP54-212ENST00000556992 MYH16Q9H6N6 1097 aa5.74□□□□□ -1.49
SRP54-212ENST00000556992 GCM1Q9NP62 436 aa5.74□□□□□ -1.49
SRP54-212ENST00000556992 GPATCH2Q9NW75 528 aa5.74□□□□□ -1.49
SRP54-212ENST00000556992 GPR160Q9UJ42 338 aa5.74□□□□□ -1.49
SRP54-212ENST00000556992 PNPLA6Q8IY17 1366 aa5.74□□□□□ -1.49
SRP54-212ENST00000556992 IFT172Q9UG01 1749 aa5.74□□□□□ -1.49
SRP54-212ENST00000556992 SLIT1O75093 1534 aa5.74□□□□□ -1.49
SRP54-212ENST00000556992 EDC4Q6P2E9 1401 aaKnown RBP5.74□□□□□ -1.49
SRP54-212ENST00000556992 TTC21BQ7Z4L5 1316 aa5.74□□□□□ -1.49
SRP54-212ENST00000556992 ATP7BP35670 1465 aa5.73□□□□□ -1.49
SRP54-212ENST00000556992 AATKQ6ZMQ8 1374 aa5.73□□□□□ -1.49
SRP54-212ENST00000556992 PSPNO60542 156 aa5.73□□□□□ -1.49
SRP54-212ENST00000556992 EIF4BP23588 611 aaKnown RBP5.73□□□□□ -1.49
SRP54-212ENST00000556992 CALD1Q05682 793 aaKnown RBP5.73□□□□□ -1.49
SRP54-212ENST00000556992 MEI1Q5TIA1 1274 aa5.73□□□□□ -1.49
SRP54-212ENST00000556992 AGMOQ6ZNB7 445 aa5.73□□□□□ -1.49
SRP54-212ENST00000556992 FAM13CQ8NE31 585 aa5.73□□□□□ -1.49
SRP54-212ENST00000556992 BAHD1Q8TBE0 780 aaPredicted RBP5.73□□□□□ -1.49
SRP54-212ENST00000556992 PANK1Q8TE04 598 aa5.73□□□□□ -1.49
SRP54-212ENST00000556992 RELTQ969Z4 430 aa5.73□□□□□ -1.49
SRP54-212ENST00000556992 CCDC136Q96JN2 1154 aa5.73□□□□□ -1.49
SRP54-212ENST00000556992 GPR62Q9BZJ7 368 aa5.73□□□□□ -1.49
SRP54-212ENST00000556992 MIR1-1HGQ9H1L0 117 aa5.73□□□□□ -1.49
SRP54-212ENST00000556992 SLC6A17Q9H1V8 727 aa5.73□□□□□ -1.49
SRP54-212ENST00000556992 CNOT6Q9ULM6 557 aaKnown RBP5.73□□□□□ -1.49
SRP54-212ENST00000556992 IVNS1ABPQ9Y6Y0 642 aa5.73□□□□□ -1.49
SRP54-212ENST00000556992 TTC21AQ8NDW8 1320 aa5.73□□□□□ -1.49
SRP54-212ENST00000556992 PRR36Q9H6K5 1346 aa5.73□□□□□ -1.49
SRP54-212ENST00000556992 MAPK8IP3Q9UPT6 1336 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms