RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 NUP133Q8WUM0 1156 aa12.63□□□□□ -0.39
XRCC3-216ENST00000556682 FERMT2Q96AC1 680 aa12.63□□□□□ -0.39
XRCC3-216ENST00000556682 GDF15Q99988 308 aa12.63□□□□□ -0.39
XRCC3-216ENST00000556682 CYP39A1Q9NYL5 469 aa12.63□□□□□ -0.39
XRCC3-216ENST00000556682 PHF24Q9UPV7 400 aa12.63□□□□□ -0.39
XRCC3-216ENST00000556682 ATP11BQ9Y2G3 1177 aa12.63□□□□□ -0.39
XRCC3-216ENST00000556682 TNKSO95271 1327 aa12.62□□□□□ -0.39
XRCC3-216ENST00000556682 WDR19Q8NEZ3 1342 aa12.62□□□□□ -0.39
XRCC3-216ENST00000556682 LOC102724159A0A0B4J2E5 919 aa12.62□□□□□ -0.39
XRCC3-216ENST00000556682 PTPDC1A2A3K4 754 aa12.62□□□□□ -0.39
XRCC3-216ENST00000556682 SOWAHBA6NEL2 793 aa12.62□□□□□ -0.39
XRCC3-216ENST00000556682 MOXD2PA6NHM9 499 aa12.62□□□□□ -0.39
XRCC3-216ENST00000556682 B4DLN1 442 aa12.62□□□□□ -0.39
XRCC3-216ENST00000556682 DHX16O60231 1041 aaKnown RBP12.62□□□□□ -0.39
XRCC3-216ENST00000556682 GOLGA8HP0CJ92 632 aa12.62□□□□□ -0.39
XRCC3-216ENST00000556682 MAGEA10P43363 369 aaPredicted RBP12.62□□□□□ -0.39
XRCC3-216ENST00000556682 MRPL12P52815 198 aaKnown RBP12.62□□□□□ -0.39
XRCC3-216ENST00000556682 SART3Q15020 963 aaKnown RBP12.62□□□□□ -0.39
XRCC3-216ENST00000556682 PWP2Q15269 919 aaKnown RBP12.62□□□□□ -0.39
XRCC3-216ENST00000556682 C1orf53Q5VUE5 145 aa12.62□□□□□ -0.39
XRCC3-216ENST00000556682 NOL8Q76FK4 1167 aaKnown RBP12.62□□□□□ -0.39
XRCC3-216ENST00000556682 CENPQQ7L2Z9 268 aaPredicted RBP12.62□□□□□ -0.39
XRCC3-216ENST00000556682 FGD4Q96M96 766 aa12.62□□□□□ -0.39
XRCC3-216ENST00000556682 UBE2OQ9C0C9 1292 aaKnown RBP12.62□□□□□ -0.39
XRCC3-216ENST00000556682 MAF1Q9H063 256 aa12.62□□□□□ -0.39
XRCC3-216ENST00000556682 IL25Q9H293 177 aa12.62□□□□□ -0.39
XRCC3-216ENST00000556682 ZNFX1Q9P2E3 1918 aaKnown RBP12.61□□□□□ -0.39
XRCC3-216ENST00000556682 ADAMTS4O75173 837 aa12.61□□□□□ -0.39
XRCC3-216ENST00000556682 C6orf222P0C671 652 aaPredicted RBP12.61□□□□□ -0.39
XRCC3-216ENST00000556682 TNFAIP2Q03169 654 aa12.61□□□□□ -0.39
XRCC3-216ENST00000556682 PTH1RQ03431 593 aa12.61□□□□□ -0.39
XRCC3-216ENST00000556682 BAATQ14032 418 aaPredicted RBP12.61□□□□□ -0.39
XRCC3-216ENST00000556682 SNX17Q15036 470 aa12.61□□□□□ -0.39
XRCC3-216ENST00000556682 RNF207Q6ZRF8 634 aa12.61□□□□□ -0.39
XRCC3-216ENST00000556682 NCOA7Q8NI08 942 aa12.61□□□□□ -0.39
XRCC3-216ENST00000556682 UBA5Q9GZZ9 404 aa12.61□□□□□ -0.39
XRCC3-216ENST00000556682 STARD7Q9NQZ5 370 aa12.61□□□□□ -0.39
XRCC3-216ENST00000556682 SYNRGQ9UMZ2 1314 aa12.61□□□□□ -0.39
XRCC3-216ENST00000556682 A0A1W2PQ45 241 aaPredicted RBP12.6□□□□□ -0.39
XRCC3-216ENST00000556682 A0A1W2PQY0 241 aa12.6□□□□□ -0.39
XRCC3-216ENST00000556682 NFIBO00712 420 aa12.6□□□□□ -0.39
XRCC3-216ENST00000556682 IFIT3O14879 490 aaKnown RBP12.6□□□□□ -0.39
XRCC3-216ENST00000556682 CYP21A2P08686 494 aa12.6□□□□□ -0.39
XRCC3-216ENST00000556682 CALML3P27482 149 aa12.6□□□□□ -0.39
XRCC3-216ENST00000556682 CST5P28325 142 aaPredicted RBP12.6□□□□□ -0.39
XRCC3-216ENST00000556682 ACLYP53396 1101 aa12.6□□□□□ -0.39
XRCC3-216ENST00000556682 GJA9P57773 515 aa12.6□□□□□ -0.39
XRCC3-216ENST00000556682 GNASQ5JWF2 1037 aa12.6□□□□□ -0.39
XRCC3-216ENST00000556682 IQSEC1Q6DN90 963 aa12.6□□□□□ -0.39
XRCC3-216ENST00000556682 RGS22Q8NE09 1264 aa12.6□□□□□ -0.39
XRCC3-216ENST00000556682 KLHDC9Q8NEP7 349 aa12.6□□□□□ -0.39
XRCC3-216ENST00000556682 MAP4K1Q92918 833 aa12.6□□□□□ -0.39
XRCC3-216ENST00000556682 VTI1AQ96AJ9 217 aa12.6□□□□□ -0.39
XRCC3-216ENST00000556682 LENG1Q96BZ8 264 aaPredicted RBP12.6□□□□□ -0.39
XRCC3-216ENST00000556682 GLT1D1Q96MS3 346 aa12.6□□□□□ -0.39
XRCC3-216ENST00000556682 AP5M1Q9H0R1 490 aa12.6□□□□□ -0.39
XRCC3-216ENST00000556682 VTA1Q9NP79 307 aa12.6□□□□□ -0.39
XRCC3-216ENST00000556682 PRDM5Q9NQX1 630 aaPredicted RBP12.6□□□□□ -0.39
XRCC3-216ENST00000556682 PCDH10Q9P2E7 1040 aa12.6□□□□□ -0.39
XRCC3-216ENST00000556682 DCDC2CA8MYV0 355 aa12.59□□□□□ -0.39
XRCC3-216ENST00000556682 E7EWF7 191 aa12.59□□□□□ -0.39
XRCC3-216ENST00000556682 ZEB2O60315 1214 aa12.59□□□□□ -0.39
XRCC3-216ENST00000556682 ALDH5A1P51649 535 aaPredicted RBP12.59□□□□□ -0.39
XRCC3-216ENST00000556682 MDM2Q00987 491 aaPredicted RBP12.59□□□□□ -0.39
XRCC3-216ENST00000556682 TRAF1Q13077 416 aa12.59□□□□□ -0.39
XRCC3-216ENST00000556682 KCNA10Q16322 511 aa12.59□□□□□ -0.39
XRCC3-216ENST00000556682 CDC37Q16543 378 aaPredicted RBP12.59□□□□□ -0.39
XRCC3-216ENST00000556682 USH1GQ495M9 461 aa12.59□□□□□ -0.39
XRCC3-216ENST00000556682 TRIM60Q495X7 471 aa12.59□□□□□ -0.39
XRCC3-216ENST00000556682 MCF2L2Q86YR7 1114 aa12.59□□□□□ -0.39
XRCC3-216ENST00000556682 ADGRF4Q8IZF3 695 aa12.59□□□□□ -0.39
XRCC3-216ENST00000556682 TDHQ8IZJ6 230 aa12.59□□□□□ -0.39
XRCC3-216ENST00000556682 DNERQ8NFT8 737 aa12.59□□□□□ -0.39
XRCC3-216ENST00000556682 MORC4Q8TE76 937 aa12.59□□□□□ -0.39
XRCC3-216ENST00000556682 CLEC4DQ8WXI8 215 aa12.59□□□□□ -0.39
XRCC3-216ENST00000556682 KATNBL1Q9H079 304 aa12.59□□□□□ -0.39
XRCC3-216ENST00000556682 UPF3AQ9H1J1 476 aaKnown RBP12.59□□□□□ -0.39
XRCC3-216ENST00000556682 VAT1LQ9HCJ6 419 aa12.59□□□□□ -0.39
XRCC3-216ENST00000556682 MRPL11Q9Y3B7 192 aaKnown RBP12.59□□□□□ -0.39
XRCC3-216ENST00000556682 Q9Y3F1 56 aa12.59□□□□□ -0.39
XRCC3-216ENST00000556682 ELP1O95163 1332 aa12.59□□□□□ -0.39
XRCC3-216ENST00000556682 ABCB11O95342 1321 aa12.59□□□□□ -0.39
XRCC3-216ENST00000556682 MROH7Q68CQ1 1323 aa12.59□□□□□ -0.39
XRCC3-216ENST00000556682 CEP290O15078 2479 aa12.58□□□□□ -0.4
XRCC3-216ENST00000556682 RPS6P62753 249 aaKnown RBP12.58□□□□□ -0.4
XRCC3-216ENST00000556682 TLE2Q04725 743 aa12.58□□□□□ -0.4
XRCC3-216ENST00000556682 PDE4DQ08499 809 aa12.58□□□□□ -0.4
XRCC3-216ENST00000556682 WTAPQ15007 396 aa12.58□□□□□ -0.4
XRCC3-216ENST00000556682 SEC23AQ15436 765 aa12.58□□□□□ -0.4
XRCC3-216ENST00000556682 CASC1Q6TDU7 716 aa12.58□□□□□ -0.4
XRCC3-216ENST00000556682 CYB5R4Q7L1T6 521 aa12.58□□□□□ -0.4
XRCC3-216ENST00000556682 EEPD1Q7L9B9 569 aa12.58□□□□□ -0.4
XRCC3-216ENST00000556682 FBXO11Q86XK2 927 aa12.58□□□□□ -0.4
XRCC3-216ENST00000556682 TOX2Q96NM4 488 aa12.58□□□□□ -0.4
XRCC3-216ENST00000556682 CPVLQ9H3G5 476 aa12.58□□□□□ -0.4
XRCC3-216ENST00000556682 RBM8AQ9Y5S9 174 aaKnown RBP12.58□□□□□ -0.4
XRCC3-216ENST00000556682 PLXNA1Q9UIW2 1896 aa12.57□□□□□ -0.4
XRCC3-216ENST00000556682 KLRF2D3W0D1 207 aa12.57□□□□□ -0.4
XRCC3-216ENST00000556682 DYNC1LI2O43237 492 aaPredicted RBP12.57□□□□□ -0.4
XRCC3-216ENST00000556682 PQBP1O60828 265 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms