RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 TNNI2P48788 182 aa11.43□□□□□ -0.58
TMEM260-211ENST00000556648 SNAP25P60880 206 aa11.43□□□□□ -0.58
TMEM260-211ENST00000556648 FKBP1AP62942 108 aaKnown RBP11.43□□□□□ -0.58
TMEM260-211ENST00000556648 RRP1BQ14684 758 aaKnown RBP11.43□□□□□ -0.58
TMEM260-211ENST00000556648 SEPT2Q15019 361 aa11.43□□□□□ -0.58
TMEM260-211ENST00000556648 PTPN14Q15678 1187 aa11.43□□□□□ -0.58
TMEM260-211ENST00000556648 KMT5BQ4FZB7 885 aa11.43□□□□□ -0.58
TMEM260-211ENST00000556648 ZNF658Q5TYW1 1059 aaPredicted RBP11.43□□□□□ -0.58
TMEM260-211ENST00000556648 SIAH1Q8IUQ4 282 aa11.43□□□□□ -0.58
TMEM260-211ENST00000556648 IDI2Q9BXS1 227 aa11.43□□□□□ -0.58
TMEM260-211ENST00000556648 PNMA6FA0A0J9YX94 578 aa11.42□□□□□ -0.58
TMEM260-211ENST00000556648 LAD1O00515 517 aa11.42□□□□□ -0.58
TMEM260-211ENST00000556648 CCT6AP40227 531 aaKnown RBP11.42□□□□□ -0.58
TMEM260-211ENST00000556648 PRCPP42785 496 aa11.42□□□□□ -0.58
TMEM260-211ENST00000556648 PMS1P54277 932 aaKnown RBP11.42□□□□□ -0.58
TMEM260-211ENST00000556648 PAK1Q13153 545 aa11.42□□□□□ -0.58
TMEM260-211ENST00000556648 CERKLQ49MI3 558 aaPredicted RBP11.42□□□□□ -0.58
TMEM260-211ENST00000556648 SPECC1LQ69YQ0 1117 aa11.42□□□□□ -0.58
TMEM260-211ENST00000556648 TC2NQ8N9U0 490 aa11.42□□□□□ -0.58
TMEM260-211ENST00000556648 GJA10Q969M2 543 aa11.42□□□□□ -0.58
TMEM260-211ENST00000556648 KBTBD4Q9NVX7 518 aa11.42□□□□□ -0.58
TMEM260-211ENST00000556648 STK32BQ9NY57 414 aa11.42□□□□□ -0.58
TMEM260-211ENST00000556648 MYH7BA7E2Y1 1941 aa11.42□□□□□ -0.58
TMEM260-211ENST00000556648 hCG_1984214I3L0E3 225 aa11.42□□□□□ -0.58
TMEM260-211ENST00000556648 PPIP5K2O43314 1243 aa11.42□□□□□ -0.58
TMEM260-211ENST00000556648 TXKP42681 527 aa11.42□□□□□ -0.58
TMEM260-211ENST00000556648 CLK2P49760 499 aaKnown RBP11.42□□□□□ -0.58
TMEM260-211ENST00000556648 CT47A1Q5JQC4 288 aaPredicted RBP11.42□□□□□ -0.58
TMEM260-211ENST00000556648 ZNF713Q8N859 430 aaPredicted RBP11.42□□□□□ -0.58
TMEM260-211ENST00000556648 MTMR8Q96EF0 704 aa11.42□□□□□ -0.58
TMEM260-211ENST00000556648 PRMT6Q96LA8 375 aaPredicted RBP11.42□□□□□ -0.58
TMEM260-211ENST00000556648 MTMR9Q96QG7 549 aa11.42□□□□□ -0.58
TMEM260-211ENST00000556648 UIMC1Q96RL1 719 aa11.42□□□□□ -0.58
TMEM260-211ENST00000556648 NUP88Q99567 741 aaPredicted RBP11.42□□□□□ -0.58
TMEM260-211ENST00000556648 RIC8AQ9NPQ8 531 aa11.42□□□□□ -0.58
TMEM260-211ENST00000556648 ADD3Q9UEY8 706 aaKnown RBP11.42□□□□□ -0.58
TMEM260-211ENST00000556648 RWDD2AQ9UIY3 292 aa11.42□□□□□ -0.58
TMEM260-211ENST00000556648 SERPINA10Q9UK55 444 aa11.42□□□□□ -0.58
TMEM260-211ENST00000556648 PSME4Q14997 1843 aa11.41□□□□□ -0.58
TMEM260-211ENST00000556648 PBX1P40424 430 aa11.41□□□□□ -0.58
TMEM260-211ENST00000556648 HDLBPQ00341 1268 aaKnown RBP11.41□□□□□ -0.58
TMEM260-211ENST00000556648 KRT31Q15323 416 aa11.41□□□□□ -0.58
TMEM260-211ENST00000556648 CALCRLQ16602 461 aa11.41□□□□□ -0.58
TMEM260-211ENST00000556648 QRICH1Q2TAL8 776 aa11.41□□□□□ -0.58
TMEM260-211ENST00000556648 CCDC17Q96LX7 622 aa11.41□□□□□ -0.58
TMEM260-211ENST00000556648 MRIQ9BWK5 157 aa11.41□□□□□ -0.58
TMEM260-211ENST00000556648 TAB2Q9NYJ8 693 aa11.41□□□□□ -0.58
TMEM260-211ENST00000556648 PI4KBQ9UBF8 816 aa11.41□□□□□ -0.58
TMEM260-211ENST00000556648 PSDA5PKW4 1024 aaPredicted RBP11.4□□□□□ -0.58
TMEM260-211ENST00000556648 POTEMA6NI47 508 aa11.4□□□□□ -0.58
TMEM260-211ENST00000556648 ZBTB5O15062 677 aa11.4□□□□□ -0.58
TMEM260-211ENST00000556648 KCNJ6P48051 423 aa11.4□□□□□ -0.58
TMEM260-211ENST00000556648 ICA1Q05084 483 aa11.4□□□□□ -0.58
TMEM260-211ENST00000556648 GRB10Q13322 594 aa11.4□□□□□ -0.58
TMEM260-211ENST00000556648 DHX8Q14562 1220 aaKnown RBP11.4□□□□□ -0.58
TMEM260-211ENST00000556648 GPATCH4Q5T3I0 446 aaKnown RBP11.4□□□□□ -0.58
TMEM260-211ENST00000556648 SLFN13Q68D06 897 aa11.4□□□□□ -0.58
TMEM260-211ENST00000556648 PPP1R18Q6NYC8 613 aa11.4□□□□□ -0.58
TMEM260-211ENST00000556648 TATDN1Q6P1N9 297 aa11.4□□□□□ -0.58
TMEM260-211ENST00000556648 ADSSL1Q8N142 457 aa11.4□□□□□ -0.58
TMEM260-211ENST00000556648 IGSF22Q8N9C0 903 aa11.4□□□□□ -0.58
TMEM260-211ENST00000556648 PNMA5Q96PV4 448 aa11.4□□□□□ -0.58
TMEM260-211ENST00000556648 NUDT12Q9BQG2 462 aa11.4□□□□□ -0.58
TMEM260-211ENST00000556648 DHX36Q9H2U1 1008 aaKnown RBP11.4□□□□□ -0.58
TMEM260-211ENST00000556648 RMND1Q9NWS8 449 aa11.4□□□□□ -0.58
TMEM260-211ENST00000556648 SLC1A4P43007 532 aa11.4□□□□□ -0.59
TMEM260-211ENST00000556648 NAA30Q147X3 362 aaPredicted RBP11.4□□□□□ -0.59
TMEM260-211ENST00000556648 MTF1Q14872 753 aa11.4□□□□□ -0.59
TMEM260-211ENST00000556648 TOGARAM2Q6ZUX3 1019 aa11.4□□□□□ -0.59
TMEM260-211ENST00000556648 CCDC112Q8NEF3 446 aa11.4□□□□□ -0.59
TMEM260-211ENST00000556648 HPS3Q969F9 1004 aa11.4□□□□□ -0.59
TMEM260-211ENST00000556648 AK8Q96MA6 479 aa11.4□□□□□ -0.59
TMEM260-211ENST00000556648 TRIM34Q9BYJ4 488 aa11.4□□□□□ -0.59
TMEM260-211ENST00000556648 NYAP2Q9P242 653 aa11.4□□□□□ -0.59
TMEM260-211ENST00000556648 CLRN2A0PK11 232 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 KCNJ18B7U540 433 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 USP17L15C9J2P7 530 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 USP17L13C9JLJ4 530 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 USP17L11C9JVI0 530 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 USP17L18D6R9N7 530 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 USP17L22D6RA61 530 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 USP17L17D6RBQ6 530 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 USP17L19D6RCP7 530 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 USP17L20D6RJB6 530 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 FANCGO15287 622 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 CTIFO43310 598 aaKnown RBP11.39□□□□□ -0.59
TMEM260-211ENST00000556648 RAD17O75943 681 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 RBL2Q08999 1139 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 USP17L24Q0WX57 530 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 KCNJ12Q14500 433 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 KCNB1Q14721 858 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 CDC37Q16543 378 aaPredicted RBP11.39□□□□□ -0.59
TMEM260-211ENST00000556648 ABCB5Q2M3G0 1257 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 USP17L6PQ6QN14 398 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 IRF2BP1Q8IU81 584 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 REXO1L1PQ8IX06 675 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 CPLX3Q8WVH0 158 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 MKL1Q969V6 931 aa11.39□□□□□ -0.59
TMEM260-211ENST00000556648 P2RX7Q99572 595 aaKnown RBP11.39□□□□□ -0.59
TMEM260-211ENST00000556648 BAG1Q99933 345 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms