RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 ASCC2Q9H1I8 757 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-218ENST00000556343 FBXO40Q9UH90 709 aa10.56□□□□□ -0.72
ACTN1-218ENST00000556343 ADAMTS5Q9UNA0 930 aa10.56□□□□□ -0.72
ACTN1-218ENST00000556343 CEP131Q9UPN4 1083 aa10.56□□□□□ -0.72
ACTN1-218ENST00000556343 RABGAP1Q9Y3P9 1069 aa10.56□□□□□ -0.72
ACTN1-218ENST00000556343 SPDYE16A6NNV3 312 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-218ENST00000556343 BTBD18B2RXH4 712 aa10.55□□□□□ -0.72
ACTN1-218ENST00000556343 GCOM1H8Y6P7 765 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-218ENST00000556343 ATP2A1O14983 1001 aa10.55□□□□□ -0.72
ACTN1-218ENST00000556343 SLC25A27O95847 323 aa10.55□□□□□ -0.72
ACTN1-218ENST00000556343 POLR2MP0CAP2 368 aa10.55□□□□□ -0.72
ACTN1-218ENST00000556343 ALAS1P13196 640 aa10.55□□□□□ -0.72
ACTN1-218ENST00000556343 GCLCP48506 637 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-218ENST00000556343 TRAPPC10P48553 1259 aa10.55□□□□□ -0.72
ACTN1-218ENST00000556343 HERVK_113P62684 666 aa10.55□□□□□ -0.72
ACTN1-218ENST00000556343 CCNA1P78396 465 aa10.55□□□□□ -0.72
ACTN1-218ENST00000556343 RESTQ13127 1097 aa10.55□□□□□ -0.72
ACTN1-218ENST00000556343 AP3B2Q13367 1082 aa10.55□□□□□ -0.72
ACTN1-218ENST00000556343 DGKZQ13574 1117 aa10.55□□□□□ -0.72
ACTN1-218ENST00000556343 PKP1Q13835 747 aa10.55□□□□□ -0.72
ACTN1-218ENST00000556343 RILPL1Q5EBL4 403 aa10.55□□□□□ -0.72
ACTN1-218ENST00000556343 GPAT2Q6NUI2 795 aa10.55□□□□□ -0.72
ACTN1-218ENST00000556343 CCAR1Q8IX12 1150 aaKnown RBP10.55□□□□□ -0.72
ACTN1-218ENST00000556343 SMCR8Q8TEV9 937 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-218ENST00000556343 ATG4CQ96DT6 458 aa10.55□□□□□ -0.72
ACTN1-218ENST00000556343 P2RX7Q99572 595 aaKnown RBP10.55□□□□□ -0.72
ACTN1-218ENST00000556343 NAP1L4Q99733 375 aaKnown RBP10.55□□□□□ -0.72
ACTN1-218ENST00000556343 RAVER2Q9HCJ3 691 aaKnown RBP10.55□□□□□ -0.72
ACTN1-218ENST00000556343 ZDHHC9Q9Y397 364 aa10.55□□□□□ -0.72
ACTN1-218ENST00000556343 ATAD5Q96QE3 1844 aa10.55□□□□□ -0.72
ACTN1-218ENST00000556343 SPDYE3A6NKU9 549 aa10.54□□□□□ -0.72
ACTN1-218ENST00000556343 BTBD19C9JJ37 291 aa10.54□□□□□ -0.72
ACTN1-218ENST00000556343 BMP15O95972 392 aa10.54□□□□□ -0.72
ACTN1-218ENST00000556343 ALDH1A1P00352 501 aa10.54□□□□□ -0.72
ACTN1-218ENST00000556343 NCLP19338 710 aaKnown RBP10.54□□□□□ -0.72
ACTN1-218ENST00000556343 NOGQ13253 232 aa10.54□□□□□ -0.72
ACTN1-218ENST00000556343 MOGSQ13724 837 aa10.54□□□□□ -0.72
ACTN1-218ENST00000556343 SNRNP48Q6IEG0 339 aaKnown RBP10.54□□□□□ -0.72
ACTN1-218ENST00000556343 CHST13Q8NET6 341 aa10.54□□□□□ -0.72
ACTN1-218ENST00000556343 BRI3BPQ8WY22 251 aa10.54□□□□□ -0.72
ACTN1-218ENST00000556343 AGBL1Q96MI9 1066 aa10.54□□□□□ -0.72
ACTN1-218ENST00000556343 TRERF1Q96PN7 1200 aa10.54□□□□□ -0.72
ACTN1-218ENST00000556343 SCAND2PQ9GZW5 306 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-218ENST00000556343 GJB4Q9NTQ9 266 aa10.54□□□□□ -0.72
ACTN1-218ENST00000556343 PIK3CDO00329 1044 aa10.53□□□□□ -0.72
ACTN1-218ENST00000556343 PPP1R11O60927 126 aaPredicted RBP10.53□□□□□ -0.72
ACTN1-218ENST00000556343 NONOQ15233 471 aaKnown RBP eCLIP10.53□□□□□ -0.72
ACTN1-218ENST00000556343 SF3A1Q15459 793 aaKnown RBP10.53□□□□□ -0.72
ACTN1-218ENST00000556343 CLEC17AQ6ZS10 378 aa10.53□□□□□ -0.72
ACTN1-218ENST00000556343 PIK3AP1Q6ZUJ8 805 aa10.53□□□□□ -0.72
ACTN1-218ENST00000556343 RIOX2Q8IUF8 465 aa10.53□□□□□ -0.72
ACTN1-218ENST00000556343 JMYQ8N9B5 988 aa10.53□□□□□ -0.72
ACTN1-218ENST00000556343 GPRC5AQ8NFJ5 357 aa10.53□□□□□ -0.72
ACTN1-218ENST00000556343 PAGR1Q9BTK6 254 aa10.53□□□□□ -0.72
ACTN1-218ENST00000556343 ACAD9Q9H845 621 aa10.53□□□□□ -0.72
ACTN1-218ENST00000556343 ZFYVE28Q9HCC9 887 aa10.53□□□□□ -0.72
ACTN1-218ENST00000556343 BIN2Q9UBW5 565 aaPredicted RBP10.53□□□□□ -0.72
ACTN1-218ENST00000556343 PCDHA6Q9UN73 950 aa10.53□□□□□ -0.72
ACTN1-218ENST00000556343 PCDHA8Q9Y5H6 950 aa10.53□□□□□ -0.72
ACTN1-218ENST00000556343 TRPM7Q96QT4 1865 aa10.53□□□□□ -0.72
ACTN1-218ENST00000556343 BAZ2BQ9UIF8 2168 aaKnown RBP10.52□□□□□ -0.72
ACTN1-218ENST00000556343 RASSF10A6NK89 507 aa10.52□□□□□ -0.73
ACTN1-218ENST00000556343 B4DLN1 442 aa10.52□□□□□ -0.73
ACTN1-218ENST00000556343 BAG4O95429 457 aaKnown RBP10.52□□□□□ -0.73
ACTN1-218ENST00000556343 CFBP00751 764 aa10.52□□□□□ -0.73
ACTN1-218ENST00000556343 TM4SF4P48230 202 aa10.52□□□□□ -0.73
ACTN1-218ENST00000556343 GRM1Q13255 1194 aa10.52□□□□□ -0.73
ACTN1-218ENST00000556343 NR5A1Q13285 461 aa10.52□□□□□ -0.73
ACTN1-218ENST00000556343 ORC2Q13416 577 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-218ENST00000556343 TMEM132BQ14DG7 1078 aa10.52□□□□□ -0.73
ACTN1-218ENST00000556343 FOXD4L6Q3SYB3 417 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-218ENST00000556343 MYSM1Q5VVJ2 828 aa10.52□□□□□ -0.73
ACTN1-218ENST00000556343 JAKMIP3Q5VZ66 844 aa10.52□□□□□ -0.73
ACTN1-218ENST00000556343 TYW1BQ6NUM6 668 aa10.52□□□□□ -0.73
ACTN1-218ENST00000556343 FOXD4L3Q6VB84 417 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-218ENST00000556343 IFNL1Q8IU54 200 aa10.52□□□□□ -0.73
ACTN1-218ENST00000556343 REPS2Q8NFH8 660 aa10.52□□□□□ -0.73
ACTN1-218ENST00000556343 OXER1Q8TDS5 423 aa10.52□□□□□ -0.73
ACTN1-218ENST00000556343 MPHOSPH6Q99547 160 aaKnown RBP10.52□□□□□ -0.73
ACTN1-218ENST00000556343 SPATC1LQ9H0A9 340 aa10.52□□□□□ -0.73
ACTN1-218ENST00000556343 MROH8Q9H579 483 aa10.52□□□□□ -0.73
ACTN1-218ENST00000556343 RNF146Q9NTX7 359 aa10.52□□□□□ -0.73
ACTN1-218ENST00000556343 ZNF536O15090 1300 aa10.52□□□□□ -0.73
ACTN1-218ENST00000556343 GOLGA6L4A6NEF3 574 aa10.51□□□□□ -0.73
ACTN1-218ENST00000556343 DDX11L8A8MPP1 907 aa10.51□□□□□ -0.73
ACTN1-218ENST00000556343 KIF28PB7ZC32 967 aa10.51□□□□□ -0.73
ACTN1-218ENST00000556343 DNM1Q05193 864 aaKnown RBP10.51□□□□□ -0.73
ACTN1-218ENST00000556343 TAF1CQ15572 869 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-218ENST00000556343 CYP4F22Q6NT55 531 aa10.51□□□□□ -0.73
ACTN1-218ENST00000556343 RNF207Q6ZRF8 634 aa10.51□□□□□ -0.73
ACTN1-218ENST00000556343 NEK8Q86SG6 692 aa10.51□□□□□ -0.73
ACTN1-218ENST00000556343 NCAPG2Q86XI2 1143 aa10.51□□□□□ -0.73
ACTN1-218ENST00000556343 ANKRD35Q8N283 1001 aa10.51□□□□□ -0.73
ACTN1-218ENST00000556343 FAM43AQ8N2R8 423 aa10.51□□□□□ -0.73
ACTN1-218ENST00000556343 SHCBP1Q8NEM2 672 aa10.51□□□□□ -0.73
ACTN1-218ENST00000556343 CAPNS2Q96L46 248 aa10.51□□□□□ -0.73
ACTN1-218ENST00000556343 HOMER2Q9NSB8 354 aa10.51□□□□□ -0.73
ACTN1-218ENST00000556343 RTEL1Q9NZ71 1219 aa10.51□□□□□ -0.73
ACTN1-218ENST00000556343 ZNF214Q9UL59 606 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-218ENST00000556343 PFASO15067 1338 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms