RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 TBX21Q9UL17 535 aa15.73■□□□□ 0.11
TGFB3-204ENST00000556285 MOXD2PA6NHM9 499 aa15.72■□□□□ 0.11
TGFB3-204ENST00000556285 PLA2G6O60733 806 aa15.72■□□□□ 0.11
TGFB3-204ENST00000556285 FGAP02671 866 aa15.72■□□□□ 0.11
TGFB3-204ENST00000556285 ASGR1P07306 291 aa15.72■□□□□ 0.11
TGFB3-204ENST00000556285 FGRP09769 529 aa15.72■□□□□ 0.11
TGFB3-204ENST00000556285 FDX1P10109 184 aa15.72■□□□□ 0.11
TGFB3-204ENST00000556285 RAG1P15918 1043 aa15.72■□□□□ 0.11
TGFB3-204ENST00000556285 CST5P28325 142 aaPredicted RBP15.72■□□□□ 0.11
TGFB3-204ENST00000556285 HOXD11P31277 338 aaPredicted RBP15.72■□□□□ 0.11
TGFB3-204ENST00000556285 SLC16A2P36021 539 aa15.72■□□□□ 0.11
TGFB3-204ENST00000556285 GJA9P57773 515 aa15.72■□□□□ 0.11
TGFB3-204ENST00000556285 BEX3Q00994 111 aa15.72■□□□□ 0.11
TGFB3-204ENST00000556285 NMIQ13287 307 aaPredicted RBP15.72■□□□□ 0.11
TGFB3-204ENST00000556285 RRP12Q5JTH9 1297 aaKnown RBP15.72■□□□□ 0.11
TGFB3-204ENST00000556285 NUP133Q8WUM0 1156 aa15.72■□□□□ 0.11
TGFB3-204ENST00000556285 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.72■□□□□ 0.11
TGFB3-204ENST00000556285 LNPKQ9C0E8 428 aa15.72■□□□□ 0.11
TGFB3-204ENST00000556285 GRXCR1A8MXD5 290 aa15.71■□□□□ 0.11
TGFB3-204ENST00000556285 RBAK-RBAKDNI3L0D1 243 aa15.71■□□□□ 0.11
TGFB3-204ENST00000556285 HSPD1P10809 573 aaKnown RBP15.71■□□□□ 0.11
TGFB3-204ENST00000556285 CDK7P50613 346 aa15.71■□□□□ 0.11
TGFB3-204ENST00000556285 HAND2P61296 217 aa15.71■□□□□ 0.11
TGFB3-204ENST00000556285 GRIN2CQ14957 1233 aa15.71■□□□□ 0.11
TGFB3-204ENST00000556285 CCDC96Q2M329 555 aa15.71■□□□□ 0.11
TGFB3-204ENST00000556285 MCMDC2Q4G0Z9 681 aa15.71■□□□□ 0.11
TGFB3-204ENST00000556285 GNASQ5JWF2 1037 aa15.71■□□□□ 0.11
TGFB3-204ENST00000556285 TOX2Q96NM4 488 aa15.71■□□□□ 0.11
TGFB3-204ENST00000556285 PDGFCQ9NRA1 345 aa15.71■□□□□ 0.11
TGFB3-204ENST00000556285 TOMM22Q9NS69 142 aa15.71■□□□□ 0.11
TGFB3-204ENST00000556285 MYO9BQ13459 2157 aa15.7■□□□□ 0.1
TGFB3-204ENST00000556285 FRMPD2Q68DX3 1309 aaPredicted RBP15.7■□□□□ 0.1
TGFB3-204ENST00000556285 DCDC2CA8MYV0 355 aa15.7■□□□□ 0.1
TGFB3-204ENST00000556285 PBX2P40425 430 aa15.7■□□□□ 0.1
TGFB3-204ENST00000556285 FPGSQ05932 587 aa15.7■□□□□ 0.1
TGFB3-204ENST00000556285 TKFCQ3LXA3 575 aa15.7■□□□□ 0.1
TGFB3-204ENST00000556285 B4GALNT3Q6L9W6 998 aa15.7■□□□□ 0.1
TGFB3-204ENST00000556285 EEPD1Q7L9B9 569 aa15.7■□□□□ 0.1
TGFB3-204ENST00000556285 VTI1AQ96AJ9 217 aa15.7■□□□□ 0.1
TGFB3-204ENST00000556285 GLT1D1Q96MS3 346 aa15.7■□□□□ 0.1
TGFB3-204ENST00000556285 TMEM47Q9BQJ4 181 aa15.7■□□□□ 0.1
TGFB3-204ENST00000556285 GPCPD1Q9NPB8 672 aa15.7■□□□□ 0.1
TGFB3-204ENST00000556285 CYP39A1Q9NYL5 469 aa15.7■□□□□ 0.1
TGFB3-204ENST00000556285 CCPG1Q9ULG6 757 aa15.7■□□□□ 0.1
TGFB3-204ENST00000556285 ELP1O95163 1332 aa15.69■□□□□ 0.1
TGFB3-204ENST00000556285 UMODL1Q5DID0 1318 aa15.69■□□□□ 0.1
TGFB3-204ENST00000556285 CHD7Q9P2D1 2997 aa15.69■□□□□ 0.1
TGFB3-204ENST00000556285 PTPRSQ13332 1948 aa15.69■□□□□ 0.1
TGFB3-204ENST00000556285 ACRP10323 421 aa15.69■□□□□ 0.1
TGFB3-204ENST00000556285 SMPD1P17405 629 aa15.69■□□□□ 0.1
TGFB3-204ENST00000556285 TNFAIP2Q03169 654 aa15.69■□□□□ 0.1
TGFB3-204ENST00000556285 PPP4R3BQ5MIZ7 849 aa15.69■□□□□ 0.1
TGFB3-204ENST00000556285 TAPT1Q6NXT6 567 aa15.69■□□□□ 0.1
TGFB3-204ENST00000556285 NSMFQ6X4W1 530 aa15.69■□□□□ 0.1
TGFB3-204ENST00000556285 NOL8Q76FK4 1167 aaKnown RBP15.69■□□□□ 0.1
TGFB3-204ENST00000556285 PCSK9Q8NBP7 692 aaKnown RBP15.69■□□□□ 0.1
TGFB3-204ENST00000556285 DCAF4Q8WV16 495 aa15.69■□□□□ 0.1
TGFB3-204ENST00000556285 PRDM6Q9NQX0 595 aa15.69■□□□□ 0.1
TGFB3-204ENST00000556285 GNEQ9Y223 722 aaKnown RBP15.69■□□□□ 0.1
TGFB3-204ENST00000556285 MUC3AQ02505 3323 aa15.69■□□□□ 0.1
TGFB3-204ENST00000556285 ASB14A6NK59 587 aa15.68■□□□□ 0.1
TGFB3-204ENST00000556285 TRIM6-TRIM34B2RNG4 842 aa15.68■□□□□ 0.1
TGFB3-204ENST00000556285 ARVCFO00192 962 aa15.68■□□□□ 0.1
TGFB3-204ENST00000556285 NFIBO00712 420 aa15.68■□□□□ 0.1
TGFB3-204ENST00000556285 TIMP1P01033 207 aa15.68■□□□□ 0.1
TGFB3-204ENST00000556285 IGHDP01880 384 aa15.68■□□□□ 0.1
TGFB3-204ENST00000556285 ICAM1P05362 532 aa15.68■□□□□ 0.1
TGFB3-204ENST00000556285 TOP1P11387 765 aaKnown RBP15.68■□□□□ 0.1
TGFB3-204ENST00000556285 FOSL2P15408 326 aa15.68■□□□□ 0.1
TGFB3-204ENST00000556285 DNAJB2P25686 324 aa15.68■□□□□ 0.1
TGFB3-204ENST00000556285 NKX3-2P78367 333 aa15.68■□□□□ 0.1
TGFB3-204ENST00000556285 TMEM240Q5SV17 173 aa15.68■□□□□ 0.1
TGFB3-204ENST00000556285 CXCL17Q6UXB2 119 aa15.68■□□□□ 0.1
TGFB3-204ENST00000556285 BTNL9Q6UXG8 535 aa15.68■□□□□ 0.1
TGFB3-204ENST00000556285 TBC1D10CQ8IV04 446 aa15.68■□□□□ 0.1
TGFB3-204ENST00000556285 FBXO16Q8IX29 292 aaPredicted RBP15.68■□□□□ 0.1
TGFB3-204ENST00000556285 FAM126BQ8IXS8 530 aa15.68■□□□□ 0.1
TGFB3-204ENST00000556285 RILPL2Q969X0 211 aa15.68■□□□□ 0.1
TGFB3-204ENST00000556285 YTHDC1Q96MU7 727 aaKnown RBP15.68■□□□□ 0.1
TGFB3-204ENST00000556285 PPP1R12CQ9BZL4 782 aa15.68■□□□□ 0.1
TGFB3-204ENST00000556285 RANBP17Q9H2T7 1088 aaKnown RBP15.68■□□□□ 0.1
TGFB3-204ENST00000556285 SPC25Q9HBM1 224 aa15.68■□□□□ 0.1
TGFB3-204ENST00000556285 GRIN2DO15399 1336 aa15.68■□□□□ 0.1
TGFB3-204ENST00000556285 CCDC171Q6TFL3 1326 aa15.68■□□□□ 0.1
TGFB3-204ENST00000556285 A0A0U1RQG5 324 aaPredicted RBP15.67■□□□□ 0.1
TGFB3-204ENST00000556285 DYNC1LI2O43237 492 aaPredicted RBP15.67■□□□□ 0.1
TGFB3-204ENST00000556285 CSF2RAP15509 400 aa15.67■□□□□ 0.1
TGFB3-204ENST00000556285 BAATQ14032 418 aaPredicted RBP15.67■□□□□ 0.1
TGFB3-204ENST00000556285 RASIP1Q5U651 963 aa15.67■□□□□ 0.1
TGFB3-204ENST00000556285 SYDE2Q5VT97 1194 aa15.67■□□□□ 0.1
TGFB3-204ENST00000556285 SMC5Q8IY18 1101 aa15.67■□□□□ 0.1
TGFB3-204ENST00000556285 VWCEQ96DN2 955 aa15.67■□□□□ 0.1
TGFB3-204ENST00000556285 TCP11L1Q9NUJ3 509 aa15.67■□□□□ 0.1
TGFB3-204ENST00000556285 CD4P01730 458 aa15.66■□□□□ 0.1
TGFB3-204ENST00000556285 CYP2C18P33260 490 aa15.66■□□□□ 0.1
TGFB3-204ENST00000556285 FSCN1Q16658 493 aaKnown RBP15.66■□□□□ 0.1
TGFB3-204ENST00000556285 AKNAD1Q5T1N1 836 aa15.66■□□□□ 0.1
TGFB3-204ENST00000556285 MFSD5Q6N075 450 aa15.66■□□□□ 0.1
TGFB3-204ENST00000556285 TLK2Q86UE8 772 aa15.66■□□□□ 0.1
TGFB3-204ENST00000556285 PLEKHM2Q8IWE5 1019 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms