RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 ZBTB48P10074 688 aaPredicted RBP11.36□□□□□ -0.59
GTF2A1-204ENST00000556268 RAC1P63000 192 aa11.36□□□□□ -0.59
GTF2A1-204ENST00000556268 HYAL2Q12891 473 aa11.36□□□□□ -0.59
GTF2A1-204ENST00000556268 PRKG1Q13976 671 aa11.36□□□□□ -0.59
GTF2A1-204ENST00000556268 SUPT20HL1Q3ZLR7 823 aa11.36□□□□□ -0.59
GTF2A1-204ENST00000556268 WFDC8Q8IUA0 241 aa11.36□□□□□ -0.59
GTF2A1-204ENST00000556268 RBSNQ9H1K0 784 aa11.36□□□□□ -0.59
GTF2A1-204ENST00000556268 FZD1Q9UP38 647 aa11.36□□□□□ -0.59
GTF2A1-204ENST00000556268 PPP2R3BQ9Y5P8 575 aa11.36□□□□□ -0.59
GTF2A1-204ENST00000556268 ZNF646O15015 1829 aaPredicted RBP11.36□□□□□ -0.59
GTF2A1-204ENST00000556268 ELNP15502 786 aa11.35□□□□□ -0.59
GTF2A1-204ENST00000556268 AAMPQ13685 434 aa11.35□□□□□ -0.59
GTF2A1-204ENST00000556268 CFAP100Q494V2 611 aa11.35□□□□□ -0.59
GTF2A1-204ENST00000556268 C8orf34Q49A92 452 aa11.35□□□□□ -0.59
GTF2A1-204ENST00000556268 BEND3Q5T5X7 828 aa11.35□□□□□ -0.59
GTF2A1-204ENST00000556268 WDR63Q8IWG1 891 aa11.35□□□□□ -0.59
GTF2A1-204ENST00000556268 FMR1NBQ8N0W7 255 aaPredicted RBP11.35□□□□□ -0.59
GTF2A1-204ENST00000556268 WNK4Q96J92 1243 aa11.35□□□□□ -0.59
GTF2A1-204ENST00000556268 CLMNQ96JQ2 1002 aa11.35□□□□□ -0.59
GTF2A1-204ENST00000556268 PCDHAC2Q9Y5I4 1007 aa11.35□□□□□ -0.59
GTF2A1-204ENST00000556268 FAM205AQ6ZU69 1335 aa11.35□□□□□ -0.59
GTF2A1-204ENST00000556268 IGF2BP3O00425 579 aaKnown RBP eCLIP11.34□□□□□ -0.59
GTF2A1-204ENST00000556268 FZD6O60353 706 aa11.34□□□□□ -0.59
GTF2A1-204ENST00000556268 KCNJ4P48050 445 aa11.34□□□□□ -0.59
GTF2A1-204ENST00000556268 IFIT5Q13325 482 aaKnown RBP11.34□□□□□ -0.59
GTF2A1-204ENST00000556268 NBPF12Q5TAG4 269 aaPredicted RBP11.34□□□□□ -0.59
GTF2A1-204ENST00000556268 INTS3Q68E01 1043 aaKnown RBP11.34□□□□□ -0.59
GTF2A1-204ENST00000556268 GDF6Q6KF10 455 aaPredicted RBP11.34□□□□□ -0.59
GTF2A1-204ENST00000556268 OTOP1Q7RTM1 612 aa11.34□□□□□ -0.59
GTF2A1-204ENST00000556268 PTPN18Q99952 460 aa11.34□□□□□ -0.59
GTF2A1-204ENST00000556268 CNTN3Q9P232 1028 aa11.34□□□□□ -0.59
GTF2A1-204ENST00000556268 EGFL7Q9UHF1 273 aa11.34□□□□□ -0.59
GTF2A1-204ENST00000556268 AOX1Q06278 1338 aa11.34□□□□□ -0.59
GTF2A1-204ENST00000556268 COL1A1P02452 1464 aaPredicted RBP11.33□□□□□ -0.6
GTF2A1-204ENST00000556268 H3BRB1 525 aa11.33□□□□□ -0.6
GTF2A1-204ENST00000556268 KIF4AO95239 1232 aa11.33□□□□□ -0.6
GTF2A1-204ENST00000556268 ATP11AP98196 1134 aa11.33□□□□□ -0.6
GTF2A1-204ENST00000556268 RASA3Q14644 834 aa11.33□□□□□ -0.6
GTF2A1-204ENST00000556268 EPHA10Q5JZY3 1008 aa11.33□□□□□ -0.6
GTF2A1-204ENST00000556268 XKR5Q6UX68 686 aa11.33□□□□□ -0.6
GTF2A1-204ENST00000556268 TTC16Q8NEE8 873 aa11.33□□□□□ -0.6
GTF2A1-204ENST00000556268 TDRD7Q8NHU6 1098 aaKnown RBP11.33□□□□□ -0.6
GTF2A1-204ENST00000556268 NACC1Q96RE7 527 aa11.33□□□□□ -0.6
GTF2A1-204ENST00000556268 TUT1Q9H6E5 874 aaKnown RBP11.33□□□□□ -0.6
GTF2A1-204ENST00000556268 KANSL3Q9P2N6 904 aa11.33□□□□□ -0.6
GTF2A1-204ENST00000556268 TRIM33Q9UPN9 1127 aa11.33□□□□□ -0.6
GTF2A1-204ENST00000556268 MYO1BO43795 1136 aa11.32□□□□□ -0.6
GTF2A1-204ENST00000556268 ICMTO60725 284 aa11.32□□□□□ -0.6
GTF2A1-204ENST00000556268 LMBR1LQ6UX01 489 aa11.32□□□□□ -0.6
GTF2A1-204ENST00000556268 LDHAL6AQ6ZMR3 332 aa11.32□□□□□ -0.6
GTF2A1-204ENST00000556268 ZNF804AQ7Z570 1209 aa11.32□□□□□ -0.6
GTF2A1-204ENST00000556268 TEPSINQ96N21 525 aa11.32□□□□□ -0.6
GTF2A1-204ENST00000556268 PTPN22Q9Y2R2 807 aa11.32□□□□□ -0.6
GTF2A1-204ENST00000556268 MYH3P11055 1940 aa11.32□□□□□ -0.6
GTF2A1-204ENST00000556268 SSC5DA1L4H1 1573 aa11.32□□□□□ -0.6
GTF2A1-204ENST00000556268 FANCIQ9NVI1 1328 aa11.32□□□□□ -0.6
GTF2A1-204ENST00000556268 CLRN2A0PK11 232 aa11.31□□□□□ -0.6
GTF2A1-204ENST00000556268 F6X3S4 739 aa11.31□□□□□ -0.6
GTF2A1-204ENST00000556268 F8W031 263 aaPredicted RBP11.31□□□□□ -0.6
GTF2A1-204ENST00000556268 SELPP16109 830 aa11.31□□□□□ -0.6
GTF2A1-204ENST00000556268 IREB2P48200 963 aaKnown RBP11.31□□□□□ -0.6
GTF2A1-204ENST00000556268 CAP1Q01518 475 aa11.31□□□□□ -0.6
GTF2A1-204ENST00000556268 EXOSC9Q06265 439 aaKnown RBP11.31□□□□□ -0.6
GTF2A1-204ENST00000556268 UBE4AQ14139 1066 aa11.31□□□□□ -0.6
GTF2A1-204ENST00000556268 CCDC57Q2TAC2 916 aa11.31□□□□□ -0.6
GTF2A1-204ENST00000556268 ANKRD13AQ8IZ07 590 aa11.31□□□□□ -0.6
GTF2A1-204ENST00000556268 DTWD1Q8N5C7 304 aa11.31□□□□□ -0.6
GTF2A1-204ENST00000556268 C1orf127Q8N9H9 656 aa11.31□□□□□ -0.6
GTF2A1-204ENST00000556268 ARMC5Q96C12 935 aa11.31□□□□□ -0.6
GTF2A1-204ENST00000556268 KAZALD1Q96I82 304 aa11.31□□□□□ -0.6
GTF2A1-204ENST00000556268 FAM84BQ96KN1 310 aaPredicted RBP11.31□□□□□ -0.6
GTF2A1-204ENST00000556268 SPACA7Q96KW9 195 aa11.31□□□□□ -0.6
GTF2A1-204ENST00000556268 MRIQ9BWK5 157 aa11.31□□□□□ -0.6
GTF2A1-204ENST00000556268 RIPOR2Q9Y4F9 1068 aa11.31□□□□□ -0.6
GTF2A1-204ENST00000556268 TRIM17Q9Y577 477 aa11.31□□□□□ -0.6
GTF2A1-204ENST00000556268 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.31□□□□□ -0.6
GTF2A1-204ENST00000556268 MKI67P46013 3256 aaKnown RBP11.31□□□□□ -0.6
GTF2A1-204ENST00000556268 HTTP42858 3142 aa11.3□□□□□ -0.6
GTF2A1-204ENST00000556268 GRM8O00222 908 aa11.3□□□□□ -0.6
GTF2A1-204ENST00000556268 PDE4CQ08493 712 aa11.3□□□□□ -0.6
GTF2A1-204ENST00000556268 CRHR2Q13324 411 aa11.3□□□□□ -0.6
GTF2A1-204ENST00000556268 OTUD7BQ6GQQ9 843 aa11.3□□□□□ -0.6
GTF2A1-204ENST00000556268 SHISA2Q6UWI4 295 aa11.3□□□□□ -0.6
GTF2A1-204ENST00000556268 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.3□□□□□ -0.6
GTF2A1-204ENST00000556268 FBXO33Q7Z6M2 555 aa11.3□□□□□ -0.6
GTF2A1-204ENST00000556268 NCAPG2Q86XI2 1143 aa11.3□□□□□ -0.6
GTF2A1-204ENST00000556268 ERO1AQ96HE7 468 aa11.3□□□□□ -0.6
GTF2A1-204ENST00000556268 RASSF4Q9H2L5 321 aa11.3□□□□□ -0.6
GTF2A1-204ENST00000556268 ZNF70Q9UC06 446 aaPredicted RBP11.3□□□□□ -0.6
GTF2A1-204ENST00000556268 KIAA0100Q14667 2235 aaKnown RBP11.29□□□□□ -0.6
GTF2A1-204ENST00000556268 ALDH1L1O75891 902 aa11.29□□□□□ -0.6
GTF2A1-204ENST00000556268 HIBADHP31937 336 aaKnown RBP11.29□□□□□ -0.6
GTF2A1-204ENST00000556268 GATA4P43694 442 aa11.29□□□□□ -0.6
GTF2A1-204ENST00000556268 HDLBPQ00341 1268 aaKnown RBP11.29□□□□□ -0.6
GTF2A1-204ENST00000556268 SP3Q02447 781 aa11.29□□□□□ -0.6
GTF2A1-204ENST00000556268 GLYCTKQ8IVS8 523 aa11.29□□□□□ -0.6
GTF2A1-204ENST00000556268 DZIP1LQ8IYY4 767 aaKnown RBP11.29□□□□□ -0.6
GTF2A1-204ENST00000556268 IL22RA1Q8N6P7 574 aa11.29□□□□□ -0.6
GTF2A1-204ENST00000556268 CHRDQ9H2X0 955 aa11.29□□□□□ -0.6
GTF2A1-204ENST00000556268 VEZTQ9HBM0 779 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms