RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 FIGNL1Q6PIW4 674 aa8.54□□□□□ -1.04
ATXN3-236ENST00000556220 SLC39A5Q6ZMH5 540 aa8.54□□□□□ -1.04
ATXN3-236ENST00000556220 GPR142Q7Z601 462 aa8.54□□□□□ -1.04
ATXN3-236ENST00000556220 PLEKHH3Q7Z736 793 aa8.54□□□□□ -1.04
ATXN3-236ENST00000556220 GOLGA6L1Q8N7Z2 621 aa8.54□□□□□ -1.04
ATXN3-236ENST00000556220 GALNT6Q8NCL4 622 aa8.54□□□□□ -1.04
ATXN3-236ENST00000556220 ADAMTS19Q8TE59 1207 aa8.54□□□□□ -1.04
ATXN3-236ENST00000556220 LPIN2Q92539 896 aa8.54□□□□□ -1.04
ATXN3-236ENST00000556220 EDC3Q96F86 508 aaKnown RBP8.54□□□□□ -1.04
ATXN3-236ENST00000556220 UHRF1Q96T88 793 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-236ENST00000556220 APBA2Q99767 749 aa8.54□□□□□ -1.04
ATXN3-236ENST00000556220 KRTAP4-6Q9BYQ5 205 aa8.54□□□□□ -1.04
ATXN3-236ENST00000556220 SRCIN1Q9C0H9 1055 aa8.54□□□□□ -1.04
ATXN3-236ENST00000556220 BICC1Q9H694 974 aaKnown RBP8.54□□□□□ -1.04
ATXN3-236ENST00000556220 PRDM5Q9NQX1 630 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-236ENST00000556220 NDFIP2Q9NV92 336 aa8.54□□□□□ -1.04
ATXN3-236ENST00000556220 DDX20Q9UHI6 824 aaKnown RBP8.54□□□□□ -1.04
ATXN3-236ENST00000556220 GAKO14976 1311 aa8.54□□□□□ -1.04
ATXN3-236ENST00000556220 SYNGAP1Q96PV0 1343 aa8.54□□□□□ -1.04
ATXN3-236ENST00000556220 SALL1Q9NSC2 1324 aa8.54□□□□□ -1.04
ATXN3-236ENST00000556220 A0A1B0GUL6 1792 aa8.53□□□□□ -1.04
ATXN3-236ENST00000556220 TRIM43BA6NCK2 446 aa8.53□□□□□ -1.04
ATXN3-236ENST00000556220 BNIP3LO60238 219 aa8.53□□□□□ -1.04
ATXN3-236ENST00000556220 LZTS3O60299 673 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-236ENST00000556220 CAP2P40123 477 aa8.53□□□□□ -1.04
ATXN3-236ENST00000556220 BACE1P56817 501 aa8.53□□□□□ -1.04
ATXN3-236ENST00000556220 HERVK_113P62684 666 aa8.53□□□□□ -1.04
ATXN3-236ENST00000556220 ERVK-24P63145 666 aa8.53□□□□□ -1.04
ATXN3-236ENST00000556220 MRPS5P82675 430 aaKnown RBP8.53□□□□□ -1.04
ATXN3-236ENST00000556220 PICALMQ13492 652 aa8.53□□□□□ -1.04
ATXN3-236ENST00000556220 CCDC27Q2M243 656 aa8.53□□□□□ -1.04
ATXN3-236ENST00000556220 WWC1Q8IX03 1113 aa8.53□□□□□ -1.04
ATXN3-236ENST00000556220 CCAR1Q8IX12 1150 aaKnown RBP8.53□□□□□ -1.04
ATXN3-236ENST00000556220 ANKRD44Q8N8A2 993 aa8.53□□□□□ -1.04
ATXN3-236ENST00000556220 KLHDC4Q8TBB5 520 aa8.53□□□□□ -1.04
ATXN3-236ENST00000556220 GTF3C2Q8WUA4 911 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-236ENST00000556220 TRIM43Q96BQ3 446 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-236ENST00000556220 WDR18Q9BV38 432 aa8.53□□□□□ -1.04
ATXN3-236ENST00000556220 C1QTNF1Q9BXJ1 281 aa8.53□□□□□ -1.04
ATXN3-236ENST00000556220 PORCNQ9H237 461 aa8.53□□□□□ -1.04
ATXN3-236ENST00000556220 AS3MTQ9HBK9 375 aa8.53□□□□□ -1.04
ATXN3-236ENST00000556220 GNL3LQ9NVN8 582 aaKnown RBP8.53□□□□□ -1.04
ATXN3-236ENST00000556220 UTYO14607 1347 aa8.53□□□□□ -1.04
ATXN3-236ENST00000556220 RFX7Q2KHR2 1363 aa8.52□□□□□ -1.05
ATXN3-236ENST00000556220 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-236ENST00000556220 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-236ENST00000556220 FAM196BA6NMK8 535 aa8.52□□□□□ -1.05
ATXN3-236ENST00000556220 BMP4P12644 408 aa8.52□□□□□ -1.05
ATXN3-236ENST00000556220 FGFR3P22607 806 aa8.52□□□□□ -1.05
ATXN3-236ENST00000556220 CNGA1P29973 690 aa8.52□□□□□ -1.05
ATXN3-236ENST00000556220 PLA2G4AP47712 749 aa8.52□□□□□ -1.05
ATXN3-236ENST00000556220 RRP1BQ14684 758 aaKnown RBP8.52□□□□□ -1.05
ATXN3-236ENST00000556220 SNX17Q15036 470 aa8.52□□□□□ -1.05
ATXN3-236ENST00000556220 TRIM60Q495X7 471 aa8.52□□□□□ -1.05
ATXN3-236ENST00000556220 AKNAD1Q5T1N1 836 aa8.52□□□□□ -1.05
ATXN3-236ENST00000556220 GJC2Q5T442 439 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-236ENST00000556220 SLC4A10Q6U841 1118 aa8.52□□□□□ -1.05
ATXN3-236ENST00000556220 NLRP8Q86W28 1048 aa8.52□□□□□ -1.05
ATXN3-236ENST00000556220 ARRDC4Q8NCT1 418 aa8.52□□□□□ -1.05
ATXN3-236ENST00000556220 PPM1EQ8WY54 764 aa8.52□□□□□ -1.05
ATXN3-236ENST00000556220 ABHD17AQ96GS6 310 aa8.52□□□□□ -1.05
ATXN3-236ENST00000556220 RNPC3Q96LT9 517 aaKnown RBP8.52□□□□□ -1.05
ATXN3-236ENST00000556220 ZNF576Q9H609 170 aa8.52□□□□□ -1.05
ATXN3-236ENST00000556220 PDLIM7Q9NR12 457 aa8.52□□□□□ -1.05
ATXN3-236ENST00000556220 TMOD4Q9NZQ9 345 aa8.52□□□□□ -1.05
ATXN3-236ENST00000556220 FLRT1Q9NZU1 646 aa8.52□□□□□ -1.05
ATXN3-236ENST00000556220 THEGQ9P2T0 379 aa8.52□□□□□ -1.05
ATXN3-236ENST00000556220 DENND2AQ9ULE3 1009 aa8.52□□□□□ -1.05
ATXN3-236ENST00000556220 COG6Q9Y2V7 657 aa8.52□□□□□ -1.05
ATXN3-236ENST00000556220 IL16Q14005 1332 aa8.52□□□□□ -1.05
ATXN3-236ENST00000556220 C19orf81C9J6K1 198 aa8.51□□□□□ -1.05
ATXN3-236ENST00000556220 EYA2O00167 538 aa8.51□□□□□ -1.05
ATXN3-236ENST00000556220 CDK2AP1O14519 115 aa8.51□□□□□ -1.05
ATXN3-236ENST00000556220 GLRX3O76003 335 aaKnown RBP8.51□□□□□ -1.05
ATXN3-236ENST00000556220 BTDP43251 543 aa8.51□□□□□ -1.05
ATXN3-236ENST00000556220 EPHB4P54760 987 aa8.51□□□□□ -1.05
ATXN3-236ENST00000556220 RHBDL3P58872 404 aa8.51□□□□□ -1.05
ATXN3-236ENST00000556220 ATP2B2Q01814 1243 aa8.51□□□□□ -1.05
ATXN3-236ENST00000556220 C1orf53Q5VUE5 145 aa8.51□□□□□ -1.05
ATXN3-236ENST00000556220 ZGPATQ8N5A5 531 aaKnown RBP8.51□□□□□ -1.05
ATXN3-236ENST00000556220 TRPV1Q8NER1 839 aa8.51□□□□□ -1.05
ATXN3-236ENST00000556220 EDARADDQ8WWZ3 215 aa8.51□□□□□ -1.05
ATXN3-236ENST00000556220 TIFAQ96CG3 184 aa8.51□□□□□ -1.05
ATXN3-236ENST00000556220 PCDHGC4Q9Y5F7 938 aa8.51□□□□□ -1.05
ATXN3-236ENST00000556220 MUC6Q6W4X9 2439 aa8.51□□□□□ -1.05
ATXN3-236ENST00000556220 PTPRFP10586 1907 aa8.5□□□□□ -1.05
ATXN3-236ENST00000556220 PLXNB2O15031 1838 aa8.5□□□□□ -1.05
ATXN3-236ENST00000556220 GPR75-ASB3A0A0A6YYF3 556 aa8.5□□□□□ -1.05
ATXN3-236ENST00000556220 SLC15A5A6NIM6 579 aa8.5□□□□□ -1.05
ATXN3-236ENST00000556220 A6NJY4 79 aa8.5□□□□□ -1.05
ATXN3-236ENST00000556220 TMEM229AB2RXF0 380 aa8.5□□□□□ -1.05
ATXN3-236ENST00000556220 SHISA8B8ZZ34 492 aa8.5□□□□□ -1.05
ATXN3-236ENST00000556220 KBTBD13C9JR72 458 aa8.5□□□□□ -1.05
ATXN3-236ENST00000556220 C2CD2LO14523 706 aa8.5□□□□□ -1.05
ATXN3-236ENST00000556220 IGHA2P01877 340 aa8.5□□□□□ -1.05
ATXN3-236ENST00000556220 HOXC6P09630 235 aa8.5□□□□□ -1.05
ATXN3-236ENST00000556220 ATP4AP20648 1035 aa8.5□□□□□ -1.05
ATXN3-236ENST00000556220 ITGB8P26012 769 aa8.5□□□□□ -1.05
ATXN3-236ENST00000556220 TLE2Q04725 743 aa8.5□□□□□ -1.05
ATXN3-236ENST00000556220 PLA2G4EQ3MJ16 856 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms