RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 SYNRGQ9UMZ2 1314 aa7□□□□□ -1.29
PRKCH-220ENST00000556164 CYP2D7A0A087X1C5 515 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 TCRBV5S4A2TA0A5A2 114 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 MYADML2A6NDP7 307 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 MOXD2PA6NHM9 499 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 SMIM22K7EJ46 135 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 VWA5AO00534 786 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 PRKAB2O43741 272 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 ATP9BO43861 1147 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 MBD4O95243 580 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 TIMP1P01033 207 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 CD46P15529 392 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 COL9A1P20849 921 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 COPB2P35606 906 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 SLC4A3P48751 1232 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 CDK8P49336 464 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 PPIGQ13427 754 aaKnown RBP eCLIP6.99□□□□□ -1.29
PRKCH-220ENST00000556164 KCNA10Q16322 511 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 SLFNL1Q499Z3 407 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 HSP90AB4PQ58FF6 505 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 FAM83BQ5T0W9 1011 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 CCDC174Q6PII3 467 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 ANKRD33Q7Z3H0 272 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 CLASRPQ8N2M8 674 aaKnown RBP6.99□□□□□ -1.29
PRKCH-220ENST00000556164 RHPN1Q8TCX5 695 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 VTI1AQ96AJ9 217 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 CCDC17Q96LX7 622 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.99□□□□□ -1.29
PRKCH-220ENST00000556164 TSEN34Q9BSV6 310 aaKnown RBP6.99□□□□□ -1.29
PRKCH-220ENST00000556164 ATP8A2Q9NTI2 1148 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 ZNF214Q9UL59 606 aaPredicted RBP6.99□□□□□ -1.29
PRKCH-220ENST00000556164 FAM184BQ9ULE4 1060 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 PPP1R9AQ9ULJ8 1098 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 ADAMTS5Q9UNA0 930 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 MROH7Q68CQ1 1323 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 TTC28Q96AY4 2481 aa6.99□□□□□ -1.29
PRKCH-220ENST00000556164 ANKRD62A6NC57 917 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 GRXCR1A8MXD5 290 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 USP17L12C9JPN9 530 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 USP17L21D6R901 530 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 IFIT2P09913 472 aaKnown RBP6.98□□□□□ -1.29
PRKCH-220ENST00000556164 C6orf222P0C671 652 aaPredicted RBP6.98□□□□□ -1.29
PRKCH-220ENST00000556164 ACRP10323 421 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 ADD2P35612 726 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 PBX2P40425 430 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 IRX5P78411 483 aaPredicted RBP6.98□□□□□ -1.29
PRKCH-220ENST00000556164 TMEM240Q5SV17 173 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 C12orf60Q5U649 245 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 SNRNP48Q6IEG0 339 aaKnown RBP6.98□□□□□ -1.29
PRKCH-220ENST00000556164 MFSD5Q6N075 450 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 C16orf86Q6ZW13 317 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 MSL3Q8N5Y2 521 aaKnown RBP6.98□□□□□ -1.29
PRKCH-220ENST00000556164 TTC13Q8NBP0 860 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 KLHDC9Q8NEP7 349 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 REPS2Q8NFH8 660 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 PRR7Q8TB68 274 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.98□□□□□ -1.29
PRKCH-220ENST00000556164 NLRP7Q8WX94 980 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 DDX11Q96FC9 970 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 GLT1D1Q96MS3 346 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 NUP88Q99567 741 aaPredicted RBP6.98□□□□□ -1.29
PRKCH-220ENST00000556164 SLF1Q9BQI6 1058 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 TEX13BQ9BXU2 312 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 PBX4Q9BYU1 374 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 PRDM12Q9H4Q4 367 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 KANSL2Q9H9L4 492 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 PAG1Q9NWQ8 432 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 THEGQ9P2T0 379 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 TBX21Q9UL17 535 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 ZMIZ1Q9ULJ6 1067 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 SYNGAP1Q96PV0 1343 aa6.98□□□□□ -1.29
PRKCH-220ENST00000556164 A0A0U1RQG5 324 aaPredicted RBP6.97□□□□□ -1.29
PRKCH-220ENST00000556164 LRRC37A2A6NM11 1700 aa6.97□□□□□ -1.29
PRKCH-220ENST00000556164 CCER2I3L3R5 266 aa6.97□□□□□ -1.29
PRKCH-220ENST00000556164 TLR3O15455 904 aaKnown RBP6.97□□□□□ -1.29
PRKCH-220ENST00000556164 DUSP11O75319 330 aaKnown RBP6.97□□□□□ -1.29
PRKCH-220ENST00000556164 SNAI1O95863 264 aaPredicted RBP6.97□□□□□ -1.29
PRKCH-220ENST00000556164 ASGR1P07306 291 aa6.97□□□□□ -1.29
PRKCH-220ENST00000556164 CSF2RAP15509 400 aa6.97□□□□□ -1.29
PRKCH-220ENST00000556164 IGFBP4P22692 258 aa6.97□□□□□ -1.29
PRKCH-220ENST00000556164 CST5P28325 142 aaPredicted RBP6.97□□□□□ -1.29
PRKCH-220ENST00000556164 ACVR2BQ13705 512 aa6.97□□□□□ -1.29
PRKCH-220ENST00000556164 CCDC85BQ15834 202 aaPredicted RBP6.97□□□□□ -1.29
PRKCH-220ENST00000556164 AKNAD1Q5T1N1 836 aa6.97□□□□□ -1.29
PRKCH-220ENST00000556164 CCSAPQ6IQ19 270 aaPredicted RBP6.97□□□□□ -1.29
PRKCH-220ENST00000556164 PSRC1Q6PGN9 363 aaPredicted RBP6.97□□□□□ -1.29
PRKCH-220ENST00000556164 ZNF365Q70YC5 407 aa6.97□□□□□ -1.29
PRKCH-220ENST00000556164 DHX37Q8IY37 1157 aaKnown RBP6.97□□□□□ -1.29
PRKCH-220ENST00000556164 CPXCR1Q8N123 301 aa6.97□□□□□ -1.29
PRKCH-220ENST00000556164 STK11IPQ8N1F8 1099 aa6.97□□□□□ -1.29
PRKCH-220ENST00000556164 TMEM199Q8N511 208 aa6.97□□□□□ -1.29
PRKCH-220ENST00000556164 PCSK9Q8NBP7 692 aaKnown RBP6.97□□□□□ -1.29
PRKCH-220ENST00000556164 ATXN2LQ8WWM7 1075 aaKnown RBP6.97□□□□□ -1.29
PRKCH-220ENST00000556164 KIF1BPQ96EK5 621 aa6.97□□□□□ -1.29
PRKCH-220ENST00000556164 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.97□□□□□ -1.29
PRKCH-220ENST00000556164 BOLA2Q9H3K6 86 aa6.97□□□□□ -1.29
PRKCH-220ENST00000556164 SPC25Q9HBM1 224 aa6.97□□□□□ -1.29
PRKCH-220ENST00000556164 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.97□□□□□ -1.29
PRKCH-220ENST00000556164 RAPGEFL1Q9UHV5 662 aa6.97□□□□□ -1.29
PRKCH-220ENST00000556164 MSRAQ9UJ68 235 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms