RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 FTOQ9C0B1 505 aaKnown RBP eCLIP9.55□□□□□ -0.88
ATXN3-235ENST00000556082 VPS33BQ9H267 617 aa9.55□□□□□ -0.88
ATXN3-235ENST00000556082 TNMDQ9H2S6 317 aa9.55□□□□□ -0.88
ATXN3-235ENST00000556082 KAT14Q9H8E8 782 aa9.55□□□□□ -0.88
ATXN3-235ENST00000556082 TTF2Q9UNY4 1162 aaKnown RBP9.55□□□□□ -0.88
ATXN3-235ENST00000556082 CLIC4Q9Y696 253 aa9.55□□□□□ -0.88
ATXN3-235ENST00000556082 SNED1Q8TER0 1413 aa9.55□□□□□ -0.88
ATXN3-235ENST00000556082 NMT2O60551 498 aa9.54□□□□□ -0.88
ATXN3-235ENST00000556082 WDHD1O75717 1129 aaPredicted RBP9.54□□□□□ -0.88
ATXN3-235ENST00000556082 GABPAQ06546 454 aa9.54□□□□□ -0.88
ATXN3-235ENST00000556082 KIAA2012Q0VF49 1180 aa9.54□□□□□ -0.88
ATXN3-235ENST00000556082 GNL2Q13823 731 aaKnown RBP9.54□□□□□ -0.88
ATXN3-235ENST00000556082 DACT2Q5SW24 774 aa9.54□□□□□ -0.88
ATXN3-235ENST00000556082 APOBEC3HQ6NTF7 200 aaKnown RBP9.54□□□□□ -0.88
ATXN3-235ENST00000556082 OLFM4Q6UX06 510 aa9.54□□□□□ -0.88
ATXN3-235ENST00000556082 CCDC125Q86Z20 511 aa9.54□□□□□ -0.88
ATXN3-235ENST00000556082 DIS3L2Q8IYB7 885 aaKnown RBP9.54□□□□□ -0.88
ATXN3-235ENST00000556082 ELOA2Q8IYF1 753 aaPredicted RBP9.54□□□□□ -0.88
ATXN3-235ENST00000556082 FMR1NBQ8N0W7 255 aaPredicted RBP9.54□□□□□ -0.88
ATXN3-235ENST00000556082 SRBD1Q8N5C6 995 aaKnown RBP9.54□□□□□ -0.88
ATXN3-235ENST00000556082 PROCA1Q8NCQ7 364 aaPredicted RBP9.54□□□□□ -0.88
ATXN3-235ENST00000556082 LRRN4Q8WUT4 740 aa9.54□□□□□ -0.88
ATXN3-235ENST00000556082 MRPS27Q92552 414 aaKnown RBP9.54□□□□□ -0.88
ATXN3-235ENST00000556082 SLC10A4Q96EP9 437 aa9.54□□□□□ -0.88
ATXN3-235ENST00000556082 TIGD1Q96MW7 591 aa9.54□□□□□ -0.88
ATXN3-235ENST00000556082 PHF20Q9BVI0 1012 aa9.54□□□□□ -0.88
ATXN3-235ENST00000556082 SH3GLB2Q9NR46 395 aa9.54□□□□□ -0.88
ATXN3-235ENST00000556082 SWAP70Q9UH65 585 aa9.54□□□□□ -0.88
ATXN3-235ENST00000556082 PLIN4Q96Q06 1357 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 LAMB1P07942 1786 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 DLEC1Q9Y238 1755 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 USP17L3A6NCW0 530 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 USP17L4A6NCW7 530 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 PALM3A6NDB9 673 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-235ENST00000556082 BTBD18B2RXH4 712 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 KINO60870 393 aaKnown RBP9.53□□□□□ -0.88
ATXN3-235ENST00000556082 CUTAO60888 179 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 PLEKHA8P1O95397 391 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 TOP1P11387 765 aaKnown RBP9.53□□□□□ -0.88
ATXN3-235ENST00000556082 CHRNA5P30532 468 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 TOB1P50616 345 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-235ENST00000556082 TYRO3Q06418 890 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 NR6A1Q15406 480 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 PFKFB3Q16875 520 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-235ENST00000556082 C6orf118Q5T5N4 469 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 GALNT17Q6IS24 598 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 Q6ZVU0 165 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 USP17L1Q7RTZ2 530 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 RTKN2Q8IZC4 609 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 FSIP1Q8NA03 581 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 ZSCAN1Q8NBB4 408 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 TMEM47Q9BQJ4 181 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 IDI2Q9BXS1 227 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 EHD4Q9H223 541 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 GOLPH3LQ9H4A5 285 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 GPBP1L1Q9HC44 474 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-235ENST00000556082 USP40Q9NVE5 1235 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 SAP30BPQ9UHR5 308 aaKnown RBP9.53□□□□□ -0.88
ATXN3-235ENST00000556082 SERPINA10Q9UK55 444 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 C10orf71Q711Q0 1435 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 COL11A2P13942 1736 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-235ENST00000556082 CNTNAP5Q8WYK1 1306 aa9.53□□□□□ -0.88
ATXN3-235ENST00000556082 BAZ2AQ9UIF9 1905 aaKnown RBP9.52□□□□□ -0.88
ATXN3-235ENST00000556082 IGKV6D-41A0A0C4DH26 115 aa9.52□□□□□ -0.89
ATXN3-235ENST00000556082 UBE2Q2LH0YL09 131 aa9.52□□□□□ -0.89
ATXN3-235ENST00000556082 ECE2O60344 883 aa9.52□□□□□ -0.89
ATXN3-235ENST00000556082 BMP15O95972 392 aa9.52□□□□□ -0.89
ATXN3-235ENST00000556082 SCG2P13521 617 aa9.52□□□□□ -0.89
ATXN3-235ENST00000556082 CALML3P27482 149 aa9.52□□□□□ -0.89
ATXN3-235ENST00000556082 KRT2P35908 639 aa9.52□□□□□ -0.89
ATXN3-235ENST00000556082 CRKP46108 304 aa9.52□□□□□ -0.89
ATXN3-235ENST00000556082 TRAPPC10P48553 1259 aa9.52□□□□□ -0.89
ATXN3-235ENST00000556082 CDC42EP5Q6NZY7 148 aa9.52□□□□□ -0.89
ATXN3-235ENST00000556082 CMTR1Q8N1G2 835 aaKnown RBP9.52□□□□□ -0.89
ATXN3-235ENST00000556082 CCDC82Q8N4S0 544 aa9.52□□□□□ -0.89
ATXN3-235ENST00000556082 TTLL6Q8N841 843 aa9.52□□□□□ -0.89
ATXN3-235ENST00000556082 FAM200AQ8TCP9 573 aa9.52□□□□□ -0.89
ATXN3-235ENST00000556082 TNFRSF25Q93038 417 aa9.52□□□□□ -0.89
ATXN3-235ENST00000556082 KCTD15Q96SI1 283 aaPredicted RBP9.52□□□□□ -0.89
ATXN3-235ENST00000556082 PSMD1Q99460 953 aa9.52□□□□□ -0.89
ATXN3-235ENST00000556082 DHX36Q9H2U1 1008 aaKnown RBP9.52□□□□□ -0.89
ATXN3-235ENST00000556082 BRMS1Q9HCU9 246 aa9.52□□□□□ -0.89
ATXN3-235ENST00000556082 MAD2L2Q9UI95 211 aa9.52□□□□□ -0.89
ATXN3-235ENST00000556082 KCNJ14Q9UNX9 436 aa9.52□□□□□ -0.89
ATXN3-235ENST00000556082 CEP131Q9UPN4 1083 aa9.52□□□□□ -0.89
ATXN3-235ENST00000556082 HPSEQ9Y251 543 aa9.52□□□□□ -0.89
ATXN3-235ENST00000556082 MYH2Q9UKX2 1941 aa9.52□□□□□ -0.89
ATXN3-235ENST00000556082 VEGFBP49765 207 aa9.51□□□□□ -0.89
ATXN3-235ENST00000556082 NPY5RQ15761 445 aa9.51□□□□□ -0.89
ATXN3-235ENST00000556082 CAMK4Q16566 473 aa9.51□□□□□ -0.89
ATXN3-235ENST00000556082 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.51□□□□□ -0.89
ATXN3-235ENST00000556082 PPP1R26Q5T8A7 1209 aaPredicted RBP9.51□□□□□ -0.89
ATXN3-235ENST00000556082 RESP18Q5W5W9 173 aa9.51□□□□□ -0.89
ATXN3-235ENST00000556082 SASS6Q6UVJ0 657 aa9.51□□□□□ -0.89
ATXN3-235ENST00000556082 FAM43AQ8N2R8 423 aa9.51□□□□□ -0.89
ATXN3-235ENST00000556082 SLC44A5Q8NCS7 719 aa9.51□□□□□ -0.89
ATXN3-235ENST00000556082 RNF214Q8ND24 703 aa9.51□□□□□ -0.89
ATXN3-235ENST00000556082 SHISA4Q96DD7 197 aa9.51□□□□□ -0.89
ATXN3-235ENST00000556082 CCDC17Q96LX7 622 aa9.51□□□□□ -0.89
ATXN3-235ENST00000556082 SPZ1Q9BXG8 430 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms