RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 TMEFF1Q8IYR6 380 aa4.85□□□□□ -1.63
EFCAB11-210ENST00000556078 GAL3ST3Q96A11 431 aa4.85□□□□□ -1.63
EFCAB11-210ENST00000556078 CRTAC1Q9NQ79 661 aa4.85□□□□□ -1.63
EFCAB11-210ENST00000556078 CEP131Q9UPN4 1083 aa4.85□□□□□ -1.63
EFCAB11-210ENST00000556078 PRXQ9BXM0 1461 aa4.85□□□□□ -1.63
EFCAB11-210ENST00000556078 ARHGAP35Q9NRY4 1499 aa4.85□□□□□ -1.63
EFCAB11-210ENST00000556078 PLCH1Q4KWH8 1693 aa4.85□□□□□ -1.63
EFCAB11-210ENST00000556078 NALCNQ8IZF0 1738 aa4.85□□□□□ -1.63
EFCAB11-210ENST00000556078 DISP2A7MBM2 1401 aa4.84□□□□□ -1.63
EFCAB11-210ENST00000556078 MST1RQ04912 1400 aa4.84□□□□□ -1.63
EFCAB11-210ENST00000556078 TNFRSF1AP19438 455 aa4.84□□□□□ -1.63
EFCAB11-210ENST00000556078 VIPR1P32241 457 aa4.84□□□□□ -1.63
EFCAB11-210ENST00000556078 HTRA3P83110 453 aa4.84□□□□□ -1.63
EFCAB11-210ENST00000556078 TEKQ02763 1124 aa4.84□□□□□ -1.63
EFCAB11-210ENST00000556078 SLC6A19Q695T7 634 aa4.84□□□□□ -1.63
EFCAB11-210ENST00000556078 B4GALNT3Q6L9W6 998 aa4.84□□□□□ -1.63
EFCAB11-210ENST00000556078 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.84□□□□□ -1.63
EFCAB11-210ENST00000556078 FAM129CQ86XR2 697 aa4.84□□□□□ -1.63
EFCAB11-210ENST00000556078 DTWD2Q8NBA8 298 aa4.84□□□□□ -1.63
EFCAB11-210ENST00000556078 LRRC59Q96AG4 307 aaKnown RBP4.84□□□□□ -1.63
EFCAB11-210ENST00000556078 SORCS2Q96PQ0 1159 aa4.84□□□□□ -1.63
EFCAB11-210ENST00000556078 CAMKK2Q96RR4 588 aa4.84□□□□□ -1.63
EFCAB11-210ENST00000556078 G6PC3Q9BUM1 346 aa4.84□□□□□ -1.63
EFCAB11-210ENST00000556078 SPON1Q9HCB6 807 aa4.84□□□□□ -1.63
EFCAB11-210ENST00000556078 TJP2Q9UDY2 1190 aa4.84□□□□□ -1.63
EFCAB11-210ENST00000556078 KCNH3Q9ULD8 1083 aa4.84□□□□□ -1.63
EFCAB11-210ENST00000556078 MYOM2P54296 1465 aa4.83□□□□□ -1.64
EFCAB11-210ENST00000556078 TROQ12816 1431 aaPredicted RBP4.83□□□□□ -1.64
EFCAB11-210ENST00000556078 PTCH1Q13635 1447 aa4.83□□□□□ -1.64
EFCAB11-210ENST00000556078 GFRA2O00451 464 aa4.83□□□□□ -1.64
EFCAB11-210ENST00000556078 FBXO24O75426 580 aa4.83□□□□□ -1.64
EFCAB11-210ENST00000556078 PDIA4P13667 645 aaKnown RBP4.83□□□□□ -1.64
EFCAB11-210ENST00000556078 GALK1P51570 392 aa4.83□□□□□ -1.64
EFCAB11-210ENST00000556078 CAP1Q01518 475 aa4.83□□□□□ -1.64
EFCAB11-210ENST00000556078 RTP5Q14D33 572 aa4.83□□□□□ -1.64
EFCAB11-210ENST00000556078 OLFML2BQ68BL8 750 aa4.83□□□□□ -1.64
EFCAB11-210ENST00000556078 TP53I13Q8NBR0 393 aaPredicted RBP4.83□□□□□ -1.64
EFCAB11-210ENST00000556078 MZB1Q8WU39 189 aa4.83□□□□□ -1.64
EFCAB11-210ENST00000556078 TMEM87BQ96K49 555 aa4.83□□□□□ -1.64
EFCAB11-210ENST00000556078 WDR26Q9H7D7 661 aa4.83□□□□□ -1.64
EFCAB11-210ENST00000556078 SLIT2O94813 1529 aa4.82□□□□□ -1.64
EFCAB11-210ENST00000556078 TMEM2Q9UHN6 1383 aa4.82□□□□□ -1.64
EFCAB11-210ENST00000556078 WASHC2CQ9Y4E1 1318 aa4.82□□□□□ -1.64
EFCAB11-210ENST00000556078 ZBTB7CA1YPR0 619 aa4.82□□□□□ -1.64
EFCAB11-210ENST00000556078 ABLIM1O14639 778 aa4.82□□□□□ -1.64
EFCAB11-210ENST00000556078 PRICKLE3O43900 615 aaPredicted RBP4.82□□□□□ -1.64
EFCAB11-210ENST00000556078 CELA3AP09093 270 aa4.82□□□□□ -1.64
EFCAB11-210ENST00000556078 CDK8P49336 464 aa4.82□□□□□ -1.64
EFCAB11-210ENST00000556078 CDR1P51861 262 aa4.82□□□□□ -1.64
EFCAB11-210ENST00000556078 PLCB3Q01970 1234 aa4.82□□□□□ -1.64
EFCAB11-210ENST00000556078 KRT27Q7Z3Y8 459 aa4.82□□□□□ -1.64
EFCAB11-210ENST00000556078 DPH2Q9BQC3 489 aaPredicted RBP4.82□□□□□ -1.64
EFCAB11-210ENST00000556078 SYT17Q9BSW7 474 aa4.82□□□□□ -1.64
EFCAB11-210ENST00000556078 TMEM131LA2VDJ0 1609 aa4.82□□□□□ -1.64
EFCAB11-210ENST00000556078 NRAPQ86VF7 1730 aa4.81□□□□□ -1.64
EFCAB11-210ENST00000556078 CROCC2H7BZ55 1655 aa4.81□□□□□ -1.64
EFCAB11-210ENST00000556078 RBM47A0AV96 593 aaKnown RBP4.81□□□□□ -1.64
EFCAB11-210ENST00000556078 K7ESM1 405 aa4.81□□□□□ -1.64
EFCAB11-210ENST00000556078 KIF3BO15066 747 aa4.81□□□□□ -1.64
EFCAB11-210ENST00000556078 NRDCO43847 1150 aa4.81□□□□□ -1.64
EFCAB11-210ENST00000556078 EFEMP2O95967 443 aa4.81□□□□□ -1.64
EFCAB11-210ENST00000556078 ZNF827Q17R98 1081 aa4.81□□□□□ -1.64
EFCAB11-210ENST00000556078 MCATQ8IVS2 390 aaKnown RBP4.81□□□□□ -1.64
EFCAB11-210ENST00000556078 WWC3Q9ULE0 1092 aa4.81□□□□□ -1.64
EFCAB11-210ENST00000556078 DLC1Q96QB1 1528 aa4.81□□□□□ -1.64
EFCAB11-210ENST00000556078 FMN1Q68DA7 1419 aa4.8□□□□□ -1.64
EFCAB11-210ENST00000556078 CARNS1A5YM72 827 aa4.8□□□□□ -1.64
EFCAB11-210ENST00000556078 GIPC1O14908 333 aa4.8□□□□□ -1.64
EFCAB11-210ENST00000556078 MATN3O15232 486 aa4.8□□□□□ -1.64
EFCAB11-210ENST00000556078 PNLIPP16233 465 aa4.8□□□□□ -1.64
EFCAB11-210ENST00000556078 DSC3Q14574 896 aa4.8□□□□□ -1.64
EFCAB11-210ENST00000556078 ENOX2Q16206 610 aaKnown RBP4.8□□□□□ -1.64
EFCAB11-210ENST00000556078 IGDCC3Q8IVU1 814 aa4.8□□□□□ -1.64
EFCAB11-210ENST00000556078 SIRT2Q8IXJ6 389 aa4.8□□□□□ -1.64
EFCAB11-210ENST00000556078 PWWP2AQ96N64 755 aa4.8□□□□□ -1.64
EFCAB11-210ENST00000556078 MRIQ9BWK5 157 aa4.8□□□□□ -1.64
EFCAB11-210ENST00000556078 ADAM30Q9UKF2 790 aa4.8□□□□□ -1.64
EFCAB11-210ENST00000556078 EFCAB6Q5THR3 1501 aa4.8□□□□□ -1.64
EFCAB11-210ENST00000556078 ABCA3Q99758 1704 aa4.8□□□□□ -1.64
EFCAB11-210ENST00000556078 NWD2Q9ULI1 1742 aa4.8□□□□□ -1.64
EFCAB11-210ENST00000556078 ATP10DQ9P241 1426 aa4.8□□□□□ -1.64
EFCAB11-210ENST00000556078 DHX29Q7Z478 1369 aaKnown RBP4.79□□□□□ -1.64
EFCAB11-210ENST00000556078 ADGRB3O60242 1522 aa4.79□□□□□ -1.64
EFCAB11-210ENST00000556078 PNMA6FA0A0J9YX94 578 aa4.79□□□□□ -1.64
EFCAB11-210ENST00000556078 PGRP06401 933 aa4.79□□□□□ -1.64
EFCAB11-210ENST00000556078 ATF3P18847 181 aa4.79□□□□□ -1.64
EFCAB11-210ENST00000556078 MAGEA10P43363 369 aaPredicted RBP4.79□□□□□ -1.64
EFCAB11-210ENST00000556078 KIR2DL1P43626 348 aaPredicted RBP4.79□□□□□ -1.64
EFCAB11-210ENST00000556078 KIR2DL2P43627 348 aaPredicted RBP4.79□□□□□ -1.64
EFCAB11-210ENST00000556078 SV2BQ7L1I2 683 aa4.79□□□□□ -1.64
EFCAB11-210ENST00000556078 TMC7Q7Z402 723 aa4.79□□□□□ -1.64
EFCAB11-210ENST00000556078 FAM9AQ8IZU1 332 aaPredicted RBP4.79□□□□□ -1.64
EFCAB11-210ENST00000556078 FBF1Q8TES7 1133 aa4.79□□□□□ -1.64
EFCAB11-210ENST00000556078 CYB5D2Q8WUJ1 264 aa4.79□□□□□ -1.64
EFCAB11-210ENST00000556078 RNF141Q8WVD5 230 aa4.79□□□□□ -1.64
EFCAB11-210ENST00000556078 OSBPL7Q9BZF2 842 aa4.79□□□□□ -1.64
EFCAB11-210ENST00000556078 SCAND2PQ9GZW5 306 aaPredicted RBP4.79□□□□□ -1.64
EFCAB11-210ENST00000556078 C1orf115Q9H7X2 142 aa4.79□□□□□ -1.64
EFCAB11-210ENST00000556078 THSD7AQ9UPZ6 1657 aa4.79□□□□□ -1.64
EFCAB11-210ENST00000556078 PTPRUQ92729 1446 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms