RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.03□□□□□ -1.76
MTHFD1-212ENST00000555858 PRDM5Q9NQX1 630 aaPredicted RBP4.03□□□□□ -1.76
MTHFD1-212ENST00000555858 C1GALT1Q9NS00 363 aa4.03□□□□□ -1.76
MTHFD1-212ENST00000555858 GABBR1Q9UBS5 961 aa4.03□□□□□ -1.76
MTHFD1-212ENST00000555858 APOBEC2Q9Y235 224 aaKnown RBP4.03□□□□□ -1.76
MTHFD1-212ENST00000555858 ST14Q9Y5Y6 855 aa4.03□□□□□ -1.76
MTHFD1-212ENST00000555858 BACE2Q9Y5Z0 518 aa4.03□□□□□ -1.76
MTHFD1-212ENST00000555858 STXBP3O00186 592 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 MEIS1O00470 390 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 AURKAO14965 403 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 KIF3BO15066 747 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 MAP4K4O95819 1239 aaPredicted RBP4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 CBX7O95931 251 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 APBA3O96018 575 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 THBDP07204 575 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 CD3EP07766 207 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 BMP3P12645 472 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 NOS3P29474 1203 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 NOP2P46087 812 aaKnown RBP4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 GPR85P60893 370 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 ITKQ08881 620 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 SART3Q15020 963 aaKnown RBP4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 TESK1Q15569 626 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 CLEC16AQ2KHT3 1053 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 LCE2CQ5TA81 110 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 E4F1Q66K89 784 aaPredicted RBP4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 KCNT2Q6UVM3 1135 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 C22orf34Q6ZV56 151 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 MTDHQ86UE4 582 aaKnown RBP4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 CCDC146Q8IYE0 955 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 IFNL3Q8IZI9 196 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 NPLOC4Q8TAT6 608 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 WFDC12Q8WWY7 111 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 TSR2Q969E8 191 aaKnown RBP4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 UTP4Q969X6 686 aaKnown RBP4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 Q96M66 194 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 MCMBPQ9BTE3 642 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 PHF20Q9BVI0 1012 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 HDAC8Q9BY41 377 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 GPR27Q9NS67 375 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 SAMD15Q9P1V8 674 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 MINPP1Q9UNW1 487 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 PCDHA9Q9Y5H5 950 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 NPFFR2Q9Y5X5 522 aa4.02□□□□□ -1.77
MTHFD1-212ENST00000555858 CNTNAP4Q9C0A0 1308 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 E2F8A0AVK6 867 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 SHTN1A0MZ66 631 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 C2orf71A6NGG8 1288 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 ARVCFO00192 962 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 CBX4O00257 560 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 NEMP1O14524 444 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 MEFVO15553 781 aaPredicted RBP4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 LEFTY1O75610 366 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 ZNF865P0CJ78 1059 aaPredicted RBP4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 KCNA6P17658 529 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 BMP8BP34820 402 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 LTBRP36941 435 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 CTSKP43235 329 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 IREB2P48200 963 aaKnown RBP4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 RAB27AP51159 221 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 TMPRSS15P98073 1019 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 KCNAB2Q13303 367 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 NFKBIBQ15653 356 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 PAOXQ6QHF9 649 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 CRTC3Q6UUV7 619 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 FAM214BQ7L5A3 538 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 PODNQ7Z5L7 613 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 KSR1Q8IVT5 923 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 WDR75Q8IWA0 830 aaKnown RBP4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 FAM20CQ8IXL6 584 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 ZNF655Q8N720 491 aaPredicted RBP4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 DAGLBQ8NCG7 672 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 PIWIL2Q8TC59 973 aaKnown RBP4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 FRS2Q8WU20 508 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 SMAD5Q99717 465 aaKnown RBP4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 GTF2IRD1Q9UHL9 959 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 SPEF1Q9Y4P9 236 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 PCDHA8Q9Y5H6 950 aa4.01□□□□□ -1.77
MTHFD1-212ENST00000555858 SHISA3A0PJX4 238 aa4□□□□□ -1.77
MTHFD1-212ENST00000555858 PLEKHD1A6NEE1 506 aa4□□□□□ -1.77
MTHFD1-212ENST00000555858 IGF2BP3O00425 579 aaKnown RBP eCLIP4□□□□□ -1.77
MTHFD1-212ENST00000555858 AKAP10O43572 662 aa4□□□□□ -1.77
MTHFD1-212ENST00000555858 GAS7O60861 476 aa4□□□□□ -1.77
MTHFD1-212ENST00000555858 GLRX3O76003 335 aaKnown RBP4□□□□□ -1.77
MTHFD1-212ENST00000555858 WFS1O76024 890 aa4□□□□□ -1.77
MTHFD1-212ENST00000555858 SCGB1D2O95969 90 aa4□□□□□ -1.77
MTHFD1-212ENST00000555858 F2P00734 622 aa4□□□□□ -1.77
MTHFD1-212ENST00000555858 FAM87AP0C7U9 286 aa4□□□□□ -1.77
MTHFD1-212ENST00000555858 PYGMP11217 842 aa4□□□□□ -1.77
MTHFD1-212ENST00000555858 IFNGR1P15260 489 aa4□□□□□ -1.77
MTHFD1-212ENST00000555858 ID4P47928 161 aa4□□□□□ -1.77
MTHFD1-212ENST00000555858 SEPHS1P49903 392 aa4□□□□□ -1.77
MTHFD1-212ENST00000555858 DSG1Q02413 1049 aa4□□□□□ -1.77
MTHFD1-212ENST00000555858 PIN1Q13526 163 aaPredicted RBP4□□□□□ -1.77
MTHFD1-212ENST00000555858 ADGRE1Q14246 886 aa4□□□□□ -1.77
MTHFD1-212ENST00000555858 SYDE2Q5VT97 1194 aa4□□□□□ -1.77
MTHFD1-212ENST00000555858 EEF1DP3Q658K8 133 aa4□□□□□ -1.77
MTHFD1-212ENST00000555858 IQCEQ6IPM2 695 aa4□□□□□ -1.77
MTHFD1-212ENST00000555858 CCSAPQ6IQ19 270 aaPredicted RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms